PDB: 26816 resultsInfo pagesStatus searchChemie searchBIRD

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7LKI	The crystal structure of Epitope III of HCV envelop protein E2 in complex with antibody 1H8 Descriptor: Epitope III peptide GLY-ALA-PRO-THR-TYR-SER-TRP-GLY, antibody 1H8 heavy chain, antibody 1H8 light chain Authors: Deng, L, Zhang, P. Deposit date: 2021-02-02 Release date: 2021-08-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: A conserved epitope III on hepatitis C virus E2 protein has alternate conformations facilitating cell binding or virus neutralization. Proc.Natl.Acad.Sci.USA, 118, 2021
7A99	Crystal structure of the Phe57Trp mutant of the arginine-bound form of domain 1 from TmArgBP Descriptor: ACETATE ION, ARGININE, Amino acid ABC transporter, ... Authors: Balasco, N, Vitagliano, L, Smaldone, G, Ruggiero, A. Deposit date: 2020-09-01 Release date: 2020-11-04 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Development of a Protein Scaffold for Arginine Sensing Generated through the Dissection of the Arginine-Binding Protein from Thermotoga maritima . Int J Mol Sci, 21, 2020
1A50	CRYSTAL STRUCTURE OF WILD-TYPE TRYPTOPHAN SYNTHASE COMPLEXED WITH 5-FLUOROINDOLE PROPANOL PHOSPHATE Descriptor: 5-FLUOROINDOLE PROPANOL PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ... Authors: Schneider, T.R, Gerhardt, E, Lee, M, Liang, P.-H, Anderson, K.S, Schlichting, I. Deposit date: 1998-02-18 Release date: 1999-03-30 Last modified: 2023-08-02 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Loop closure and intersubunit communication in tryptophan synthase. Biochemistry, 37, 1998
1HDE	HALOALKANE DEHALOGENASE MUTANT WITH PHE 172 REPLACED WITH TRP Descriptor: HALOALKANE DEHALOGENASE Authors: Ridder, I.S, Kalk, K.H, Dijkstra, B.W. Deposit date: 1996-08-08 Release date: 1997-02-12 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Kinetic characterization and X-ray structure of a mutant of haloalkane dehalogenase with higher catalytic activity and modified substrate range. Biochemistry, 35, 1996
1FUY	CRYSTAL STRUCTURE OF BETAA169L/BETAC170W DOUBLE MUTANT OF TRYPTOPHAN SYNTHASE COMPLEXED WITH 5-FLUORO-INDOLE-PROPANOL PHOSPHATE Descriptor: 5-FLUOROINDOLE PROPANOL PHOSPHATE, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ... Authors: Weyand, M, Schlichting, I. Deposit date: 2000-09-18 Release date: 2001-01-17 Last modified: 2021-11-03 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Structural basis for the impaired channeling and allosteric inter-subunit communication in the beta A169L/beta C170W mutant of tryptophan synthase. J.Biol.Chem., 275, 2000
6HTE	Sulfolobus solfataricus Tryptophan Synthase B2a Descriptor: DI(HYDROXYETHYL)ETHER, PYRIDOXAL-5'-PHOSPHATE, Tryptophan synthase beta chain 2 Authors: Fleming, J, Mayans, O, Bucher, R. Deposit date: 2018-10-04 Release date: 2018-11-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.961 Å) Cite: Evolutionary Morphing of Tryptophan Synthase: Functional Mechanisms for the Enzymatic Channeling of Indole. J.Mol.Biol., 430, 2018
1JAV	AVERAGE NMR SOLUTION STRUCTURE OF THE TRP-RICH PEPTIDE OF HIV GP41 BOUND TO DPC MICELLES Descriptor: TRANSMEMBRANE GLYCOPROTEIN (GP41) Authors: Schibli, D.J, Montelaro, R.C, Vogel, H.J. Deposit date: 2001-05-31 Release date: 2001-10-17 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: The membrane-proximal tryptophan-rich region of the HIV glycoprotein, gp41, forms a well-defined helix in dodecylphosphocholine micelles. Biochemistry, 40, 2001
1I73	COMPLEX OF PRO-LEU-L-TRP PHOSPHONATE WITH THE CATALITIC DOMAIN OF MATRIX METALLO PROTEINASE-8 (MET80 FORM) Descriptor: CALCIUM ION, NEUTROPHIL COLLAGENASE, THREE RESIDUE PEPTIDE INHIBITOR, ... Authors: Gavuzzo, E, Pochetti, G, Mazza, F, Gallina, C, Gorini, B, D'Alessio, S, Pieper, M, Tschesche, H, Tucker, P.A. Deposit date: 2001-03-07 Release date: 2001-03-21 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Two crystal structures of human neutrophil collagenase, one complexed with a primed- and the other with an unprimed-side inhibitor: implications for drug design. J.Med.Chem., 43, 2000
2ZC6	Penicillin-binding protein 1A (PBP 1A) acyl-enzyme complex (tebipenem) from Streptococcus pneumoniae Descriptor: (4R,5S)-3-(1-(4,5-dihydrothiazol-2-yl)azetidin-3-ylthio)-5-((2S,3R)-3-hydroxy-1-oxobutan-2-yl)-4-methyl-4,5- dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 1A, ZINC ION Authors: Yamada, M, Watanabe, T, Takeuchi, Y. Deposit date: 2007-11-02 Release date: 2008-04-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae Antimicrob.Agents Chemother., 52, 2008
1JAU	NMR Solution Structure of the Trp-Rich Peptide of HIV gp41 Bound to DPC Micelles Descriptor: TRANSMEMBRANE GLYCOPROTEIN (GP41) Authors: Schibli, D.J, Montelaro, R.C, Vogel, H.J. Deposit date: 2001-05-31 Release date: 2001-10-17 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: The membrane-proximal tryptophan-rich region of the HIV glycoprotein, gp41, forms a well-defined helix in dodecylphosphocholine micelles. Biochemistry, 40, 2001
2ZC5	Penicillin-binding protein 1A (PBP 1A) acyl-enzyme complex (biapenem) from Streptococcus pneumoniae Descriptor: (4R,5S)-3-(6,7-dihydro-5H-pyrazolo[1,2-a][1,2,4]triazol-4-ium-6-ylsulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-meth yl-4,5-dihydro-1H-pyrrole-2-carboxylate, Penicillin-binding protein 1A, ZINC ION Authors: Yamada, M, Watanabe, T, Takeuchi, Y. Deposit date: 2007-11-02 Release date: 2008-04-08 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystal Structures of Biapenem and Tebipenem Complexed with Penicillin-Binding Proteins 2X and 1A from Streptococcus pneumoniae Antimicrob.Agents Chemother., 52, 2008
1DWB	CRYSTALLOGRAPHIC ANALYSIS AT 3.0-ANGSTROMS RESOLUTION OF THE BINDING TO HUMAN THROMBIN OF FOUR ACTIVE SITE-DIRECTED INHIBITORS Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), BENZAMIDINE, ... Authors: Banner, D.W, Hadvary, P. Deposit date: 1992-08-19 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (3.16 Å) Cite: Crystallographic analysis at 3.0-A resolution of the binding to human thrombin of four active site-directed inhibitors. J.Biol.Chem., 266, 1991
1DWD	CRYSTALLOGRAPHIC ANALYSIS AT 3.0-ANGSTROMS RESOLUTION OF THE BINDING TO HUMAN THROMBIN OF FOUR ACTIVE SITE-DIRECTED INHIBITORS Descriptor: 1-[N-(naphthalen-2-ylsulfonyl)glycyl-4-carbamimidoyl-D-phenylalanyl]piperidine, ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), ... Authors: Banner, D.W, Hadvary, P. Deposit date: 1992-08-19 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystallographic analysis at 3.0-A resolution of the binding to human thrombin of four active site-directed inhibitors. J.Biol.Chem., 266, 1991
1DWE	Crystallographic analysis at 3.0-Angstroms resolution of the binding to human thrombin of four active site-directed inhibitors Descriptor: ALPHA-THROMBIN heavy chain, ALPHA-THROMBIN light chain, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ... Authors: Banner, D.W, Hadvary, P. Deposit date: 1992-08-19 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystallographic analysis at 3.0-A resolution of the binding to human thrombin of four active site-directed inhibitors. J.Biol.Chem., 266, 1991
1DWC	CRYSTALLOGRAPHIC ANALYSIS AT 3.0-ANGSTROMS RESOLUTION OF THE BINDING TO HUMAN THROMBIN OF FOUR ACTIVE SITE-DIRECTED INHIBITORS Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), HIRUDIN IIIA, ... Authors: Banner, D.W, Hadvary, P. Deposit date: 1992-08-19 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (3 Å) Cite: Crystallographic analysis at 3.0-A resolution of the binding to human thrombin of four active site-directed inhibitors. J.Biol.Chem., 266, 1991
4EQH	Crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from human complexed with Trp-AMS Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-O-[(L-TRYPTOPHYLAMINO)SULFONYL]ADENOSINE, Histidine triad nucleotide-binding protein 1 Authors: Wang, J, Fang, P, Guo, M. Deposit date: 2012-04-18 Release date: 2012-05-02 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.668 Å) Cite: Side chain independent recognition of aminoacyl adenylates by the hint1 transcription suppressor. J.Phys.Chem.B, 116, 2012
1ZWK	Structure of WrbA from Pseudomonas aeruginosa Descriptor: PHOSPHATE ION, Trp repressor binding protein WrbA Authors: Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2005-06-03 Release date: 2005-06-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide. Protein Sci., 14, 2005
2JIY	PHOTOSYNTHETIC REACTION CENTER MUTANT WITH ALA M149 REPLACED WITH TRP (CHAIN M, AM149W) Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ... Authors: Fyfe, P.K, Potter, J.A, Cheng, J, Williams, C.M, Watson, A.J, Jones, M.R. Deposit date: 2007-07-03 Release date: 2007-09-04 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural Responses to Cavity-Creating Mutations in an Integral Membrane Protein. Biochemistry, 46, 2007
2JJ0	PHOTOSYNTHETIC REACTION CENTER MUTANT WITH ALA M248 REPLACED WITH TRP (CHAIN M, AM248W) Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ... Authors: Fyfe, P.K, Potter, J.A, Cheng, J, Williams, C.M, Watson, A.J, Jones, M.R. Deposit date: 2007-07-03 Release date: 2007-09-04 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural Responses to Cavity-Creating Mutations in an Integral Membrane Protein. Biochemistry, 46, 2007
1ZWL	Structure of WrbA from Pseudomonas aeruginosa in complex with FMN Descriptor: FLAVIN MONONUCLEOTIDE, Trp repressor binding protein WrbA Authors: Gorman, J, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2005-06-03 Release date: 2005-06-14 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structures of the tryptophan repressor binding protein WrbA and complexes with flavin mononucleotide. Protein Sci., 14, 2005
5EOC	Crystal structure of Fab C2 in complex with a Cyclic variant of Hepatitis C Virus E2 epitope I Descriptor: ALA-CYS-GLN-LEU-ILE-ASN-THR-ASN-GLY-SER-TRP-HIS-ILE-CYS, Fab fragment (Heavy chain), Fab fragment (Light chain) Authors: Berisio, R, Ruggiero, A, Sandomenico, A, Patel, A.H, Ruvo, M, Vitagliano, L. Deposit date: 2015-11-10 Release date: 2016-02-10 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.98 Å) Cite: Generation and Characterization of Monoclonal Antibodies against a Cyclic Variant of Hepatitis C Virus E2 Epitope 412-422. J.Virol., 90, 2016
2QVJ	Crystal structure of a vesicular stomatitis virus nucleocapsid protein Ser290Trp mutant Descriptor: Nucleocapsid protein Authors: Luo, M, Green, T.J, Zhang, X, Tsao, J, Qiu, S. Deposit date: 2007-08-08 Release date: 2008-01-08 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Role of intermolecular interactions of vesicular stomatitis virus nucleoprotein in RNA encapsidation. J.Virol., 82, 2008
4NBC	Oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form1) Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ... Authors: Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H. Deposit date: 2013-10-23 Release date: 2014-03-26 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.945 Å) Cite: Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase. Appl.Environ.Microbiol., 80, 2014
4NBE	Fluorene-bound oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form2) Descriptor: 9H-fluorene, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ... Authors: Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H. Deposit date: 2013-10-23 Release date: 2014-03-26 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase. Appl.Environ.Microbiol., 80, 2014
1PPC	GEOMETRY OF BINDING OF THE BENZAMIDINE-AND ARGININE-BASED INHIBITORS N-ALPHA-(2-NAPHTHYL-SULPHONYL-GLYCYL)-DL-P-AMIDINOPHENYLALANYL-PIPERIDINE (NAPAP) AND (2R,4R)-4-METHYL-1-[N-ALPHA-(3-METHYL-1,2,3,4-TETRAHYDRO-8-QUINOLINESULPHONYL)-L-ARGINYL]-2-PIPERIDINE CARBOXYLIC ACID (MQPA) TO HUMAN ALPHA-THROMBIN: X-RAY CRYSTALLOGRAPHIC DETERMINATION OF THE NAPAP-TRYPSIN COMPLEX AND MODELING OF NAPAP-THROMBIN AND MQPA-THROMBIN Descriptor: 1-[N-(naphthalen-2-ylsulfonyl)glycyl-4-carbamimidoyl-D-phenylalanyl]piperidine, CALCIUM ION, TRYPSIN Authors: Bode, W, Turk, D. Deposit date: 1991-10-24 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Geometry of binding of the benzamidine- and arginine-based inhibitors N alpha-(2-naphthyl-sulphonyl-glycyl)-DL-p-amidinophenylalanyl-pipe ridine (NAPAP) and (2R,4R)-4-methyl-1-[N alpha-(3-methyl-1,2,3,4-tetrahydr quinolinesulphonyl)-L-arginyl]-2-piperidine carboxylic acid (MQPA) to human alpha-thrombin.X-ray crystallographic determination of the NAPAP-trypsin complex and modeling of NAPAP-thrombin and MQPA-thrombin. Eur.J.Biochem., 193, 1990

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