Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YF1
DownloadVisualize
BU of 1yf1 by Molmil
Structural and biochemical analysis of the link between enzymatic activity and oligomerization in AhpC, a bacterial peroxiredoxin.
Descriptor: Alkyl hydroperoxide reductase subunit C, SODIUM ION
Authors:Parsonage, D, Youngblood, D.S, Sarma, G.N, Wood, Z.A, Karplus, P.A, Poole, L.B.
Deposit date:2004-12-29
Release date:2005-08-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Analysis of the Link between Enzymatic Activity and Oligomeric State in AhpC, a Bacterial Peroxiredoxin.
Biochemistry, 44, 2005
1AI1
DownloadVisualize
BU of 1ai1 by Molmil
HIV-1 V3 LOOP MIMIC
Descriptor: AIB142, IGG1-KAPPA 59.1 FAB (HEAVY CHAIN), IGG1-KAPPA 59.1 FAB (LIGHT CHAIN)
Authors:Ghiara, J.B, Wilson, I.A.
Deposit date:1996-11-06
Release date:1997-05-15
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-based design of a constrained peptide mimic of the HIV-1 V3 loop neutralization site.
J.Mol.Biol., 266, 1997
2C81
DownloadVisualize
BU of 2c81 by Molmil
Crystal structures of the PLP- and PMP-bound forms of BtrR, a dual functional aminotransferase involved in butirosin biosynthesis.
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GLUTAMINE-2-DEOXY-SCYLLO-INOSOSE AMINOTRANSFERASE
Authors:Popovic, B, Tang, X, Chirgadze, D.Y, Huang, F, Blundell, T.L, Spencer, J.B.
Deposit date:2005-11-30
Release date:2006-08-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of the PLP- and PMP-bound forms of BtrR, a dual functional aminotransferase involved in butirosin biosynthesis.
Proteins, 65, 2006
5RT7
DownloadVisualize
BU of 5rt7 by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000015442276
Descriptor: 1H-PYRROLO[2,3-B]PYRIDINE, Non-structural protein 3
Authors:Correy, G.J, Young, I.D, Thompson, M.C, Fraser, J.S.
Deposit date:2020-09-28
Release date:2020-12-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Fragment binding to the Nsp3 macrodomain of SARS-CoV-2 identified through crystallographic screening and computational docking.
Sci Adv, 7, 2021
3IOZ
DownloadVisualize
BU of 3ioz by Molmil
SIVmac239 Nef in complex with a TCR zeta polypeptide DP1 (L51-D93)
Descriptor: Protein Nef, T-cell surface glycoprotein CD3 zeta chain
Authors:Kim, W.M, Sigalov, A.B, Stern, L.J.
Deposit date:2009-08-15
Release date:2010-02-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.699 Å)
Cite:Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
Acta Crystallogr.,Sect.D, 66, 2010
1XU2
DownloadVisualize
BU of 1xu2 by Molmil
The crystal structure of APRIL bound to BCMA
Descriptor: NICKEL (II) ION, Tumor necrosis factor ligand superfamily member 13, Tumor necrosis factor receptor superfamily member 17
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J.A, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-25
Release date:2004-11-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding
J.Biol.Chem., 280, 2005
3IYQ
DownloadVisualize
BU of 3iyq by Molmil
tmRNA-SmpB: a journey to the center of the bacterial ribosome
Descriptor: SsrA-binding protein, tmRNA
Authors:Weis, F, Bron, P, Giudice, E, Rolland, J.P, Thomas, D, Felden, B, Gillet, R.
Deposit date:2010-04-16
Release date:2010-10-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (13 Å)
Cite:tmRNA-SmpB: a journey to the centre of the bacterial ribosome.
Embo J., 29, 2010
1XWR
DownloadVisualize
BU of 1xwr by Molmil
Crystal structure of the coliphage lambda transcription activator protein CII
Descriptor: ISOPROPYL ALCOHOL, Regulatory protein CII
Authors:Datta, A.B, Panjikar, S, Weiss, M.S, Chakrabarti, P, Parrack, P.
Deposit date:2004-11-02
Release date:2005-06-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structure of {lambda} CII: Implications for recognition of direct-repeat DNA by an unusual tetrameric organization
Proc.Natl.Acad.Sci.USA, 102, 2005
4IDW
DownloadVisualize
BU of 4idw by Molmil
Polycrystalline T6 Bovine Insulin: Anisotropic Lattice Evolution and Novel Structure Refinement Strategy
Descriptor: Insulin A chain, Insulin B chain, ZINC ION
Authors:Margiolaki, I, Giannopoulou, A.E, Wright, J.P, Knight, L, Norrman, M, Schluckebier, G, Fitch, A, Von Dreele, R.B.
Deposit date:2012-12-13
Release date:2013-06-05
Method:POWDER DIFFRACTION
Cite:High-resolution powder X-ray data reveal the T6 hexameric form of bovine insulin
Acta Crystallogr.,Sect.D, 69, 2013
2C9J
DownloadVisualize
BU of 2c9j by Molmil
Structure of the fluorescent protein cmFP512 at 1.35A from Cerianthus membranaceus
Descriptor: GREEN FLUORESCENT PROTEIN FP512
Authors:Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U.
Deposit date:2005-12-12
Release date:2006-10-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Exploring Chromophore-Protein Interactions in Fluorescent Protein Cmfp512 from Cerianthus Membranaceus: X-Ray Structure Analysis and Optical Spectroscopy.
Biochemistry, 45, 2006
3L61
DownloadVisualize
BU of 3l61 by Molmil
Crystal structure of substrate-free P450cam at 200 mM [K+]
Descriptor: Camphor 5-monooxygenase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lee, Y.-T, Wilson, R.F, Rupniewski, I, Goodin, D.B.
Deposit date:2009-12-22
Release date:2010-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:P450cam visits an open conformation in the absence of substrate.
Biochemistry, 49, 2010
4AQK
DownloadVisualize
BU of 4aqk by Molmil
Inositol 1,3,4,5,6-pentakisphosphate 2-kinase in complex with ADP and IP6
Descriptor: ADENOSINE-5'-DIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, INOSITOL-PENTAKISPHOSPHATE 2-KINASE, ...
Authors:I Banos-Sanz, J, Sanz-Aparicio, J, Gonzalez, B.
Deposit date:2012-04-18
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Expression, Purification, Crystallization and Preliminary X-Ray Diffraction Analysis of the Apo Form of Insp5 2-K from Arabidopsis Thaliana.
Acta Crystallogr.,Sect.F, 68, 2012
1AMM
DownloadVisualize
BU of 1amm by Molmil
1.2 ANGSTROM STRUCTURE OF GAMMA-B CRYSTALLIN AT 150K
Descriptor: GAMMA B-CRYSTALLIN
Authors:Kumaraswamy, V.S, Lindley, P.F, Slingsby, C, Glover, I.D.
Deposit date:1996-03-20
Release date:1996-11-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:An eye lens protein-water structure: 1.2 A resolution structure of gammaB-crystallin at 150 K.
Acta Crystallogr.,Sect.D, 52, 1996
4RCD
DownloadVisualize
BU of 4rcd by Molmil
Crystal structure of BACE1 in complex with a 2-aminooxazoline 4-azaxanthene inhibitor
Descriptor: (5S)-7-(2-fluoropyridin-3-yl)-3-[(3-methyloxetan-3-yl)ethynyl]spiro[chromeno[2,3-b]pyridine-5,4'-[1,3]oxazol]-2'-amine, Beta-secretase 1, GLYCEROL, ...
Authors:Whittington, D.A, Long, A.M.
Deposit date:2014-09-15
Release date:2015-01-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Inhibitors of beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE1): Identification of (S)-7-(2-Fluoropyridin-3-yl)-3-((3-methyloxetan-3-yl)ethynyl)-5'H-spiro[chromeno[2,3-b]pyridine-5,4'-oxazol]-2'-amine (AMG-8718).
J.Med.Chem., 57, 2014
3L63
DownloadVisualize
BU of 3l63 by Molmil
Crystal structure of camphor-bound P450cam at low [K+]
Descriptor: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Lee, Y.-T, Wilson, R.F, Rupniewski, I, Goodin, D.B.
Deposit date:2009-12-22
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:P450cam visits an open conformation in the absence of substrate.
Biochemistry, 49, 2010
1Y5E
DownloadVisualize
BU of 1y5e by Molmil
Crystal structure of Molybdenum cofactor biosynthesis protein B
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, IMIDAZOLE, Molybdenum cofactor biosynthesis protein B
Authors:Chang, C, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2004-12-02
Release date:2005-01-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Molybdenum cofactor biosynthesis protein B
TO BE PUBLISHED
3QIN
DownloadVisualize
BU of 3qin by Molmil
Crystal Structure of HIV-1 RNase H p15 with engineered E. coli loop and pyrimidinol carboxylic acid inhibitor
Descriptor: 2-(3-bromo-4-methoxybenzyl)-5,6-dihydroxypyrimidine-4-carboxylic acid, Fusion protein of HIV-1 RNase H p15 with engineered E. coli loop, MANGANESE (II) ION, ...
Authors:Lansdon, E.B, Kirschberg, T.A.
Deposit date:2011-01-27
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6967 Å)
Cite:Structural and Binding Analysis of Pyrimidinol Carboxylic Acid and N-Hydroxy Quinazolinedione HIV-1 RNase H Inhibitors.
Antimicrob.Agents Chemother., 55, 2011
1Y3T
DownloadVisualize
BU of 1y3t by Molmil
Crystal structure of YxaG, a dioxygenase from Bacillus subtilis
Descriptor: FE (III) ION, Hypothetical protein yxaG
Authors:Gopal, B, Madan, L.L, Betz, S.F, Kossiakoff, A.A.
Deposit date:2004-11-26
Release date:2005-01-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Crystal Structure of a Quercetin 2,3-Dioxygenase from Bacillus subtilis Suggests Modulation of Enzyme Activity by a Change in the Metal Ion at the Active Site(s)
Biochemistry, 44, 2005
4GJ9
DownloadVisualize
BU of 4gj9 by Molmil
Crystal structure of renin in complex with GP055321 (compound 4)
Descriptor: (2R)-1-(3,8-dihydrodibenzo[b,f]pyrrolo[3,4-d]azepin-2(1H)-yl)propan-2-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, Renin
Authors:Ostermann, N, Zink, F, Kroemer, M.
Deposit date:2012-08-09
Release date:2013-02-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A novel class of oral direct Renin inhibitors: highly potent 3,5-disubstituted piperidines bearing a tricyclic p3-p1 pharmacophore.
J.Med.Chem., 56, 2013
1B0L
DownloadVisualize
BU of 1b0l by Molmil
RECOMBINANT HUMAN DIFERRIC LACTOFERRIN
Descriptor: CARBONATE ION, FE (III) ION, PROTEIN (LACTOFERRIN)
Authors:Baker, E.N, Jameson, G.B, Sun, X.
Deposit date:1998-11-11
Release date:1999-11-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of recombinant human lactoferrin expressed in Aspergillus awamori.
Acta Crystallogr.,Sect.D, 55, 1999
4AE9
DownloadVisualize
BU of 4ae9 by Molmil
Structure and function of the Human Sperm-Specific Isoform of Protein Kinase A (PKA) Catalytic Subunit C alpha 2
Descriptor: CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT ALPHA
Authors:Hereng, T.H, Backe, P.H, Kahmann, J, Scheich, C, Bjoras, M, Skalhegg, B.S, Rosendal, K.R.
Deposit date:2012-01-09
Release date:2012-04-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Function of the Human Sperm-Specific Isoform of Protein Kinase a (Pka) Catalytic Subunit Calpha2
J.Struct.Biol., 178, 2012
1B3Q
DownloadVisualize
BU of 1b3q by Molmil
CRYSTAL STRUCTURE OF CHEA-289, A SIGNAL TRANSDUCING HISTIDINE KINASE
Descriptor: MERCURY (II) ION, PROTEIN (CHEMOTAXIS PROTEIN CHEA)
Authors:Bilwes, A.M, Alex, L.A, Crane, B.R, Simon, M.I.
Deposit date:1998-12-14
Release date:1999-12-15
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of CheA, a signal-transducing histidine kinase.
Cell(Cambridge,Mass.), 96, 1999
2HM9
DownloadVisualize
BU of 2hm9 by Molmil
Solution structure of dihydrofolate reductase complexed with trimethoprim, 33 structures
Descriptor: 2,4-DIAMINO-5-(3,4,5-TRIMETHOXY-BENZYL)-PYRIMIDIN-1-IUM, Dihydrofolate reductase
Authors:Polshakov, V.I, Birdsall, B.
Deposit date:2006-07-11
Release date:2007-06-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structures of apo L.casei dihydrofolate reductase and its complexes with trimethoprim and NADPH. Contributions to positive cooperative binding from ligand-induced refolding, conformational changes and interligand hydrophobic interactions
Biochemistry, 2011
4NLP
DownloadVisualize
BU of 4nlp by Molmil
Poliovirus Polymerase - C290V Loop Mutant
Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ...
Authors:Sholders, A.J, Peersen, O.B.
Deposit date:2013-11-14
Release date:2014-01-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Distinct conformations of a putative translocation element in poliovirus polymerase.
J.Mol.Biol., 426, 2014
4NLX
DownloadVisualize
BU of 4nlx by Molmil
Poliovirus Polymerase - G289A/C290V Loop Mutant
Descriptor: ACETIC ACID, PENTAETHYLENE GLYCOL, RNA-directed RNA polymerase 3D-POL, ...
Authors:Sholders, A.J, Peersen, O.B.
Deposit date:2013-11-14
Release date:2014-01-22
Last modified:2014-03-26
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinct conformations of a putative translocation element in poliovirus polymerase.
J.Mol.Biol., 426, 2014

223790

数据于2024-08-14公开中

PDB statisticsPDBj update infoContact PDBjnumon