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2JCB
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BU of 2jcb by Molmil
The crystal structure of 5-formyl-tetrahydrofolate cycloligase from Bacillus anthracis (BA4489)
Descriptor: 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE FAMILY PROTEIN, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Meier, C, Carter, L.G, Winter, G, Owens, R.J, Stuart, D.I, Esnouf, R.M, Oxford Protein Production Facility (OPPF), Structural Proteomics in Europe (SPINE)
Deposit date:2006-12-21
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of 5-Formyltetrahydrofolate Cyclo-Ligase from Bacillus Anthracis (Ba4489).
Acta Crystallogr.,Sect.F, 63, 2007
3II6
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BU of 3ii6 by Molmil
Structure of human Xrcc4 in complex with the tandem BRCT domains of DNA LigaseIV.
Descriptor: CHLORIDE ION, DNA ligase 4, DNA repair protein XRCC4
Authors:Meesala, S, Junop, M.
Deposit date:2009-07-31
Release date:2009-08-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional interaction between the human DNA repair proteins DNA ligase IV and XRCC4
MOL.CELL.BIOL., 11, 2009
1NWI
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BU of 1nwi by Molmil
Crystal structure of CO-HbI transformed to an unligated state
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:Knapp, J.E, Royer JR, W.E.
Deposit date:2003-02-06
Release date:2003-08-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin.
Biochemistry, 42, 2003
5COV
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BU of 5cov by Molmil
Structure and mechanism of a eukaryal nick-sealing RNA ligase K170M+Mn
Descriptor: MANGANESE (II) ION, Naegleria gruberi RNA ligase
Authors:Unciuleac, M.C, Goldgur, Y, Shuman, S.
Deposit date:2015-07-20
Release date:2015-10-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and two-metal mechanism of a eukaryal nick-sealing RNA ligase.
Proc.Natl.Acad.Sci.USA, 112, 2015
5G4Z
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BU of 5g4z by Molmil
Structural basis for carboxylic acid recognition by a Cache chemosensory domain.
Descriptor: Methyl-accepting chemotaxis sensory transducer with Cache sensor, TRIETHYLENE GLYCOL, UNKNOWN LIGAND
Authors:Brewster, J, McKellar, J.L.O, Newman, J, Peat, T.S, Gerth, M.L.
Deposit date:2016-05-18
Release date:2017-03-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for ligand recognition by a Cache chemosensory domain that mediates carboxylate sensing in Pseudomonas syringae.
Sci Rep, 6, 2016
5COT
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BU of 5cot by Molmil
Structure and mechanism of a eukaryal nick-sealing RNA ligase
Descriptor: ADENOSINE MONOPHOSPHATE, Naegleria gruberi RNA ligase, UNKNOWN ATOM OR ION
Authors:Unciuleac, M.C, Goldgur, Y, Shuman, S.
Deposit date:2015-07-20
Release date:2015-10-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structure and two-metal mechanism of a eukaryal nick-sealing RNA ligase.
Proc.Natl.Acad.Sci.USA, 112, 2015
1P31
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BU of 1p31 by Molmil
Crystal Structure of UDP-N-acetylmuramic acid:L-alanine Ligase (MurC) from Haemophilus influenzae
Descriptor: MAGNESIUM ION, UDP-N-acetylmuramate--alanine ligase, URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
Authors:Mol, C.D, Brooun, A, Dougan, D.R, Hilgers, M.T, Tari, L.W, Wijnands, R.A, Knuth, M.W, McRee, D.E, Swanson, R.V.
Deposit date:2003-04-16
Release date:2003-07-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structures of Active Fully Assembled Substrate- and Product-Bound Complexes of UDP-N-Acetylmuramic Acid:L-Alanine Ligase (MurC) from Haemophilus influenzae.
J.Bacteriol., 185, 2003
5COU
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BU of 5cou by Molmil
Structure and mechanism of a eukaryal nick-sealing RNA ligase K170M+ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Naegleria gruberi RNA ligase
Authors:Unciuleac, M.C, Goldgur, Y, Shuman, S.
Deposit date:2015-07-20
Release date:2015-10-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and two-metal mechanism of a eukaryal nick-sealing RNA ligase.
Proc.Natl.Acad.Sci.USA, 112, 2015
2H89
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BU of 2h89 by Molmil
Avian Respiratory Complex II with Malonate Bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
2H88
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BU of 2h88 by Molmil
Avian Mitochondrial Respiratory Complex II at 1.8 Angstrom Resolution
Descriptor: AZIDE ION, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
1P3D
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BU of 1p3d by Molmil
Crystal Structure of UDP-N-acetylmuramic acid:L-alanine ligase (MurC) in Complex with UMA and ANP.
Descriptor: MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, UDP-N-acetylmuramate--alanine ligase, ...
Authors:Mol, C.D, Brooun, A, Dougan, D.R, Hilgers, M.T, Tari, L.W, Wijnands, R.A, Knuth, M.W, McRee, D.E, Swanson, R.V.
Deposit date:2003-04-17
Release date:2003-07-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Active Fully Assembled Substrate- and Product-Bound Complexes of UDP-N-Acetylmuramic Acid:L-Alanine Ligase (MurC) from Haemophilus influenzae.
J.Bacteriol., 185, 2003
6D3N
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BU of 6d3n by Molmil
Crystal structure of h4-1BB ligand
Descriptor: GLYCEROL, Tumor necrosis factor ligand superfamily member 9
Authors:Aruna, B, Zajonc, D.M, Doukov, T.
Deposit date:2018-04-16
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structures of the human 4-1BB receptor bound to its ligand 4-1BBL reveal covalent receptor dimerization as a potential signaling amplifier.
J. Biol. Chem., 293, 2018
2V7B
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BU of 2v7b by Molmil
Crystal structures of a benzoate CoA ligase from Burkholderia xenovorans LB400
Descriptor: BENZOATE-COENZYME A LIGASE, BENZOIC ACID
Authors:J Boulanger, M, Bains, J.
Deposit date:2007-07-27
Release date:2007-10-02
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Biochemical and Structural Characterization of the Paralogous Benzoate Coa Ligases from Burkholderia Xenovorans Lb400: Defining the Entry Point Into the Novel Benzoate Oxidation (Box) Pathway.
J.Mol.Biol., 373, 2007
1EHI
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BU of 1ehi by Molmil
D-ALANINE:D-LACTATE LIGASE (LMDDL2) OF VANCOMYCIN-RESISTANT LEUCONOSTOC MESENTEROIDES
Descriptor: 1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE:D-LACTATE LIGASE, ...
Authors:Kuzin, A.P, Sun, T, Jorczak-Baillass, J, Healy, V.L, Walsh, C.T, Knox, J.R.
Deposit date:2000-02-21
Release date:2000-05-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Enzymes of vancomycin resistance: the structure of D-alanine-D-lactate ligase of naturally resistant Leuconostoc mesenteroides.
Structure Fold.Des., 8, 2000
2DLN
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BU of 2dln by Molmil
VANCOMYCIN RESISTANCE: STRUCTURE OF D-ALANINE:D-ALANINE LIGASE AT 2.3 ANGSTROMS RESOLUTION
Descriptor: 1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE--D-ALANINE LIGASE, ...
Authors:Knox, J.R, Moews, P.C, Fan, C.
Deposit date:1994-07-18
Release date:1995-11-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Vancomycin resistance: structure of D-alanine:D-alanine ligase at 2.3 A resolution.
Science, 266, 1994
6LL9
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BU of 6ll9 by Molmil
Crystal structure of D-alanine-D-alanine ligase from Aeromonas hydrophila
Descriptor: D-ALANINE, D-alanine--D-alanine ligase
Authors:Zhang, H.
Deposit date:2019-12-22
Release date:2020-07-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Insights into the Inhibition ofAeromonas hydrophilad-Alanine-d-Alanine Ligase by Integration of Kinetics and Structural Analysis.
J.Agric.Food Chem., 68, 2020
6M2U
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BU of 6m2u by Molmil
The crystal structure of benzoate coenzyme A ligase double mutant (H333A/I334A) in complex with 2-chloro-1,3-thiazole-5-carboxylate-AMP
Descriptor: 2-chloranyl-1,3-thiazole-5-carboxylic acid, ADENOSINE MONOPHOSPHATE, Benzoate-coenzyme A ligase
Authors:Li, T.L, Adhikari, K.
Deposit date:2020-02-29
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.709 Å)
Cite:Chemoenzymatic Synthesis and Biological Evaluation for Bioactive Molecules Derived from Bacterial Benzoyl Coenzyme A Ligase and Plant Type III Polyketide Synthase.
Biomolecules, 10, 2020
6N0V
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BU of 6n0v by Molmil
tRNA ligase
Descriptor: MANGANESE (II) ION, tRNA ligase
Authors:Banerjee, A, Goldgur, Y, Shuman, S.
Deposit date:2018-11-07
Release date:2019-01-09
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Structure and two-metal mechanism of fungal tRNA ligase.
Nucleic Acids Res., 47, 2019
5WFY
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BU of 5wfy by Molmil
Crystal structure of DNA-binding domain of the bacteriophage T4 ligase
Descriptor: DNA ligase, GLYCEROL
Authors:Shi, K, Aihara, H.
Deposit date:2017-07-13
Release date:2018-09-26
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:T4 DNA ligase structure reveals a prototypical ATP-dependent ligase with a unique mode of sliding clamp interaction.
Nucleic Acids Res., 46, 2018
6N0T
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BU of 6n0t by Molmil
tRNA ligase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
Authors:Banerjee, A, Goldgur, Y, Shuman, S.
Deposit date:2018-11-07
Release date:2019-01-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.511 Å)
Cite:Structure and two-metal mechanism of fungal tRNA ligase.
Nucleic Acids Res., 47, 2019
4CC6
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BU of 4cc6 by Molmil
Fragment-Based Discovery of 6 Azaindazoles As Inhibitors of Bacterial DNA Ligase
Descriptor: 2-{[2-(1H-pyrazolo[3,4-c]pyridin-3-yl)-6-(trifluoromethyl)pyridin-4-yl]amino}ethanol, DNA LIGASE, SULFATE ION
Authors:Howard, S, Amin, N, Benowitz, A.B, Chiarparin, E, Cui, H, Deng, X, Heightman, T.D, Holmes, D.J, Hopkins, A, Huang, J, Jin, Q, Kreatsoulas, C, Martin, A.C.L, Massey, F, McCloskey, L, Mortenson, P.N, Pathuri, P, Tisi, D, Williams, P.A.
Deposit date:2013-10-18
Release date:2014-06-18
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Fragment-Based Discovery of 6-Azaindazoles as Inhibitors of Bacterial DNA Ligase.
Acs Med.Chem.Lett., 4, 2013
3GDE
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BU of 3gde by Molmil
The closed conformation of ATP-dependent DNA ligase from Archaeoglobus fulgidus
Descriptor: DNA ligase, PHOSPHATE ION
Authors:Kim, D.J, Kim, H.-W, Kim, O, Kim, H.S, Lee, S.J, Suh, S.W.
Deposit date:2009-02-24
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:ATP-dependent DNA ligase from Archaeoglobus fulgidus displays a tightly closed conformation
Acta Crystallogr.,Sect.F, 65, 2009
3RR5
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BU of 3rr5 by Molmil
DNA ligase from the archaeon Thermococcus sp. 1519
Descriptor: DNA ligase, MAGNESIUM ION
Authors:Petrova, T, Bezsudnova, E.Y, Boyko, K.M, Mardanov, A.V, Popov, V.O, Polyakov, K.M, Ravin, N.V, Shabalin, I.G, Skryabin, K.G, Stekhanova, T.N, Kovalchuk, M.V.
Deposit date:2011-04-29
Release date:2012-04-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.018 Å)
Cite:ATP-dependent DNA ligase from Thermococcus sp. 1519 displays a new arrangement of the OB-fold domain.
Acta Crystallogr.,Sect.F, 68, 2012
1KKC
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BU of 1kkc by Molmil
Crystal structure of Aspergillus fumigatus MnSOD
Descriptor: MANGANESE (II) ION, Manganese Superoxide Dismutase
Authors:Fluckiger, S, Mittl, P.R.E, Scapozza, L, Fijten, H, Folkers, G, Grutter, M.G, Blaser, K, Crameri, R.
Deposit date:2001-12-07
Release date:2001-12-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Comparison of the crystal structures of the human manganese superoxide dismutase and the homologous Aspergillus fumigatus allergen at 2-A resolution.
J.Immunol., 168, 2002
2DEQ
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BU of 2deq by Molmil
Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in complex with Biotinyl-5'-AMP, K111G mutation
Descriptor: 235aa long hypothetical biotin--[acetyl-CoA-carboxylase] ligase, BIOTINYL-5-AMP
Authors:Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-02-16
Release date:2006-08-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ligand Structures Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3
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238582

数据于2025-07-09公开中

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