PDB: 2055 resultsInfo pagesStatus searchChemie searchBIRD

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6QSO	mTFP* closed conformation: I197E-Y200H-Y204H mutant for enhanced metal binding Descriptor: GFP-like fluorescent chromoprotein cFP484 Authors: Fischer, J, Renn, D, Arold, T.A, Groll, M. Deposit date: 2019-02-21 Release date: 2020-01-01 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A Robust and Versatile Host Protein for the Design and Evaluation of Artificial Metal Centers Acs Catalysis, 2019
1HCJ	Photoproduct of the wild-type Aequorea victoria Green Fluorescent Protein Descriptor: GREEN FLUORESCENT PROTEIN Authors: Van Thor, J.J, Gensch, T, Hellingwerf, K.J, Johnson, L. Deposit date: 2001-05-04 Release date: 2001-12-07 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Phototransformation of Green Fluorescent Protein with Uv and Visible Light Leads to Decarboxylation of Glutamate 222 Nat.Struct.Biol., 9, 2002
1RDS	CRYSTAL STRUCTURE OF RIBONUCLEASE MS (AS RIBONUCLEASE T1 HOMOLOGUE) COMPLEXED WITH A GUANYLYL-3',5'-CYTIDINE ANALOGUE Descriptor: 2'-FLUOROGUANYLYL-(3'-5')-PHOSPHOCYTIDINE, RIBONUCLEASE MS Authors: Nonaka, T, Nakamura, K.T, Mitsui, Y. Deposit date: 1993-05-14 Release date: 1993-10-31 Last modified: 2017-11-29 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of ribonuclease Ms (as a ribonuclease T1 homologue) complexed with a guanylyl-3',5'-cytidine analogue. Biochemistry, 32, 1993
3GFP	Structure of the C-terminal domain of the DEAD-box protein Dbp5 Descriptor: DEAD box protein 5 Authors: Erzberger, J.P, Dossani, Z.Y, Weirich, C.S, Weis, K, Berger, J.M. Deposit date: 2009-02-27 Release date: 2009-09-01 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of the C-terminus of the mRNA export factor Dbp5 reveals the interaction surface for the ATPase activator Gle1 Proc.Natl.Acad.Sci.USA, 106, 2009
3MGF	Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 7.5 Descriptor: Fluorescent protein Authors: Ebisawa, T, Yamamura, A, Ohtsuka, J, Kameda, Y, Hayakawa, K, Nagata, K, Tanokura, M. Deposit date: 2010-04-06 Release date: 2011-03-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structure of Monomeric Kusabira-Orange (MKO), Orange-Emitting GFP-like Protein, at pH 7.5 To be Published
2P3S	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (G214R/Q199R) Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... Authors: Counago, R, Wilson, C.J, Myers, J, Wu, G, Shamoo, Y. Deposit date: 2007-03-09 Release date: 2008-01-22 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (G214R/Q199R) To be Published
1QYO	Anaerobic precylization intermediate crystal structure for S65G Y66G GFP variant Descriptor: green-fluorescent protein Authors: Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2003-09-11 Release date: 2003-09-30 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures. Proc.Natl.Acad.Sci.Usa, 100, 2003
8U22	A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 7 Descriptor: Green Fluorescent Protein Variant #7, ccGFP 7 Authors: Hung, L.-W, Terwilliger, T.C, Waldo, G, Nguyen, H.B. Deposit date: 2023-09-05 Release date: 2024-01-31 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Engineering highly stable variants of Corynactis californica green fluorescent proteins. Protein Sci., 33, 2024
2PSJ	Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis Descriptor: N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, Renilla-luciferin 2-monooxygenase Authors: Loening, A.M, Fenn, T.D, Gambhir, S.S. Deposit date: 2007-05-06 Release date: 2007-06-05 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis. J.Mol.Biol., 374, 2007
2GX2	Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa Descriptor: MAGNESIUM ION, fluorescent protein Dronpa Authors: Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K. Deposit date: 2006-05-08 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S Biochem.Biophys.Res.Commun., 354, 2007
2O29	Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-BR Complex Descriptor: BROMIDE ION, Green fluorescent protein Authors: Garau, G. Deposit date: 2006-11-29 Release date: 2007-05-15 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP. Biophys.J., 93, 2007
3CFF	Photoswitchable red fluorescent protein psRFP, on-state Descriptor: GFP-like photoswitchable fluorescent protein Authors: Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J. Deposit date: 2008-03-03 Release date: 2009-03-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of Anemonia sulcata red fluorescent protein asRFP To be Published
2OO7	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (T179I/Q199R) Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... Authors: Counago, R, Wilson, C.J, Wu, G, Myers, J.C, Wittung-Stafshede, P, Shamoo, Y. Deposit date: 2007-01-25 Release date: 2008-02-05 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (T179I/Q199R) To be Published
2OSB	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q16L/Q199R/) Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... Authors: Myers, J, Counago, R, Wilson, C.J, Wu, G, Shamoo, Y. Deposit date: 2007-02-05 Release date: 2008-01-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q16L/Q199R/) To be Published
1QYQ	Crystal Structure of the cyclized S65G Y66G GFP variant Descriptor: green-fluorescent protein Authors: Barondeau, D.P, Putnam, C.D, Kassmann, C.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2003-09-11 Release date: 2003-09-30 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Mechanism and energetics of green fluorescent protein chromophore synthesis revealed by trapped intermediate structures. Proc.Natl.Acad.Sci.Usa, 100, 2003
2P4M	High pH structure of Rtms5 H146S variant Descriptor: GFP-like non-fluorescent chromoprotein, IODIDE ION Authors: Battad, J.M, Wilmann, P.G, Olsen, S, Byres, E, Smith, S.C, Dove, S.G, Turcic, K.N, Devenish, R.J, Rossjohn, J, Prescott, M. Deposit date: 2007-03-12 Release date: 2007-04-03 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A structural basis for the pH-dependent increase in fluorescence efficiency of chromoproteins J.Mol.Biol., 368, 2007
3CM0	Crystal structure of adenylate kinase from Thermus thermophilus HB8 Descriptor: Adenylate kinase Authors: Nakagawa, N, Kondo, N, Masui, R, Matsuda, Z, Iwamoto, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2008-03-20 Release date: 2008-09-23 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of adenylate kinase from Thermus thermophilus HB8 To be Published
2QAJ	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R/G213E) Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... Authors: Counago, R, Wilson, C.J, Myers, J, Wu, G, Shamoo, Y. Deposit date: 2007-06-15 Release date: 2008-04-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R/G213E) To be Published
2EU8	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R) Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ... Authors: Chen, S, Shamoo, Y. Deposit date: 2005-10-28 Release date: 2006-06-27 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: In vivo molecular evolution reveals biophysical origins of organismal fitness. Mol.Cell, 22, 2006
2ORI	Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (A193V/Q199R/) Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... Authors: Counago, R, Shamoo, Y, Wilson, C.J, Wu, G, Myers, J. Deposit date: 2007-02-02 Release date: 2008-01-15 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (A193V/Q199R/) To be Published
4EES	Crystal structure of iLOV Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2 Authors: Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2012-03-28 Release date: 2012-05-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.805 Å) Cite: Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
8WU6	Structure of a Nerylneryl Diphosphate Synthase from Solanum lycopersicum Descriptor: Nerylneryl diphosphate synthase CPT2, chloroplastic Authors: Li, F.R, Wang, Q.L, Pan, X.M, Dong, L.B. Deposit date: 2023-10-20 Release date: 2024-05-08 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Discovery, Structure, and Engineering of a cis-Geranylfarnesyl Diphosphate Synthase. Angew.Chem.Int.Ed.Engl., 63, 2024
6M9X	X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A Descriptor: Fluorescent protein lanFP10A Authors: Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S. Deposit date: 2018-08-24 Release date: 2019-03-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019
8A83	rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination Descriptor: Green fluorescent protein, SULFATE ION Authors: Fadini, A, van Thor, J, Chang, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
7LG4	Green fluorescent protein from Aequorea macrodactyla - amacGFP Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Bozhanova, N.G, Meiler, J. Deposit date: 2021-01-19 Release date: 2021-01-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Heterogeneity of the GFP fitness landscape and data-driven protein design. Elife, 11, 2022

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