PDB: 5751 resultsInfo pagesStatus searchChemie searchBIRD

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8KC0	De novo design protein -NB8 Descriptor: De novo design protein -NB8 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-05 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.1 Å) Cite: De novo design protein -NB8 To Be Published
8KAC	De novo design protein -NX1 Descriptor: De novo design protein -NX1 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.75 Å) Cite: De novo design protein -NX1 To Be Published
8KC4	De novo design protein -NA05 Descriptor: De novo design protein -NA05 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: De novo design protein -NA05 To Be Published
8KDQ	De novo design protein -T03 Descriptor: De novo design protein -T03 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-09 Release date: 2024-08-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: De novo design protein -T03 To Be Published
8KC1	De novo design protein -NX5 Descriptor: De novo design protein -NX5 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-05 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: De novo design protein -NX5 To Be Published
8KC8	De novo design protein -T11 Descriptor: De novo design protein -T11 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.65 Å) Cite: De novo design protein -T11 To Be Published
8KA7	De novo design protein -NB7 Descriptor: De novo design protein -NB7 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: De novo design protein -NB7 To Be Published
8KCJ	De novo design protein -N7 Descriptor: De novo design protein -N7, GLYCEROL Authors: Wang, S, Liu, Y. Deposit date: 2023-08-07 Release date: 2024-08-14 Method: X-RAY DIFFRACTION (1.45 Å) Cite: De novo design protein -N7 To Be Published
8KC5	De novo design protein -T09 Descriptor: De novo design protein -T09 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: De novo design protein -T09 To Be Published
8KA6	De novo design protein -NA7 Descriptor: De novo design protein -NA7 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: De novo design protein -NA7 To Be Published
6MRS	De novo designed protein Peak6 Descriptor: Peak6, SULFATE ION Authors: Koepnick, B, Boykov, A, Baker, D. Deposit date: 2018-10-15 Release date: 2019-06-12 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.541 Å) Cite: De novo protein design by citizen scientists. Nature, 570, 2019
7CBC	Crystal structure of a de novo designed switch protein caging a hemagglutinin binder Descriptor: De novo designed switch protein caging a hemagglutinin binder (sCageHA267_1S), ETHANOL Authors: Lee, H, Oh, B.-H, Baker, D. Deposit date: 2020-06-11 Release date: 2020-12-23 Last modified: 2021-03-31 Method: X-RAY DIFFRACTION (1.99 Å) Cite: De novo design of modular and tunable protein biosensors. Nature, 591, 2021
6MRR	De novo designed protein Foldit1 Descriptor: Foldit1 Authors: Koepnick, B, Bick, M.J, Estep, R.D, Kleinfelter, S, Wei, L, Baker, D. Deposit date: 2018-10-15 Release date: 2019-06-12 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.18 Å) Cite: De novo protein design by citizen scientists. Nature, 570, 2019
8TNB	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo mefuparib Descriptor: 5-fluoro-2-{4-[(methylamino)methyl]phenyl}-1-benzofuran-7-carboxamide, De novo designed protein Authors: Lu, L, DeGrado, W.F. Deposit date: 2023-08-01 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TNC	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo niraparib Descriptor: 2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide, De novo designed protein Authors: Lu, L, DeGrado, W.F. Deposit date: 2023-08-01 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TND	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo veliparib Descriptor: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium, De novo designed protein, SULFATE ION Authors: Lu, L, DeGrado, W.F. Deposit date: 2023-08-01 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.29 Å) Cite: De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8K83	De novo design protein -N2 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, De novo design protein, GLYCEROL Authors: Wang, S, Liu, Y. Deposit date: 2023-07-28 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: De novo design protein -N2 To Be Published
8K84	De novo design protein -N3 Descriptor: DI(HYDROXYETHYL)ETHER, De novo design protein Authors: Wang, S, Liu, Y. Deposit date: 2023-07-28 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (2 Å) Cite: De novo design protein -N3 To Be Published
1PBZ	DE NOVO DESIGNED PEPTIDE-METALLOPORPHYRIN COMPLEX, SOLUTION STRUCTURE Descriptor: COPROPORPHYRIN I CONTAINING CO(III), De novo designed cyclic peptide Authors: Wang, J, Rosenblatt, M.M, Suslick, K.S. Deposit date: 2003-05-15 Release date: 2003-12-09 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: De novo designed cyclic-peptide heme complexes Proc.Natl.Acad.Sci.USA, 100, 2003
6X1K	Solution NMR structure of de novo designed TMB2.3 Descriptor: De novo designed transmembrane beta-barrel TMB2.3 Authors: Liang, B, Vorobieva, A.A, Chow, C.M, Baker, D, Tamm, L.K. Deposit date: 2020-05-19 Release date: 2021-02-17 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: De novo design of transmembrane beta barrels. Science, 371, 2021
6E5C	Solution NMR structure of a de novo designed double-stranded beta-helix Descriptor: De novo beta protein Authors: Marcos, E, Chidyausiku, T.M, McShan, A, Evangelidis, T, Nerli, S, Sgourakis, N, Tripsianes, K, Baker, D. Deposit date: 2018-07-19 Release date: 2018-11-07 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: De novo design of a non-local beta-sheet protein with high stability and accuracy. Nat. Struct. Mol. Biol., 25, 2018
8UP1	CryoEM Structure of Allosterically Switchable De Novo Protein sr322, In Closed State without Effector Peptide Descriptor: De Novo Protein sr322 Authors: Weidle, C, Borst, A. Deposit date: 2023-10-20 Release date: 2024-08-14 Last modified: 2024-09-11 Method: ELECTRON MICROSCOPY (4.55 Å) Cite: De novo design of allosterically switchable protein assemblies. Nature, 632, 2024
8UTM	CryoEM Structure of Allosterically Switchable De Novo Protein sr322, In Closed State without Effector Peptide, off Target Multimeric State Descriptor: de novo protein sr322 Authors: Weidle, C, Borst, A. Deposit date: 2023-10-31 Release date: 2024-08-14 Last modified: 2024-09-18 Method: ELECTRON MICROSCOPY (4.32 Å) Cite: De novo design of allosterically switchable protein assemblies. Nature, 632, 2024
7UWY	NMR solution structure of the De novo designed small beta-barrel protein 29_bp_sh3 Descriptor: De novo designed small beta-barrel protein 29_bp_sh3 Authors: Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D. Deposit date: 2022-05-04 Release date: 2023-03-22 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: De novo design of small beta barrel proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
7UWZ	NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3 Descriptor: De novo designed small beta-barrel protein 33_bp_sh3 Authors: Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D. Deposit date: 2022-05-04 Release date: 2023-03-22 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: De novo design of small beta barrel proteins. Proc.Natl.Acad.Sci.USA, 120, 2023

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