Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6UXL
DownloadVisualize
BU of 6uxl by Molmil
Structure of serine hydroxymethyltransferase 8 from Glycine max cultivar Forrest complexed with PLP-Glycine
Descriptor: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase
Authors:Korasick, D.A, Tanner, J.J, Beamer, L.J.
Deposit date:2019-11-07
Release date:2020-02-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Impaired folate binding of serine hydroxymethyltransferase 8 from soybean underlies resistance to the soybean cyst nematode.
J.Biol.Chem., 295, 2020
8DOM
DownloadVisualize
BU of 8dom by Molmil
Structure of the N358Y single variant ofserine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP
Descriptor: 1,2-ETHANEDIOL, Serine hydroxymethyltransferase
Authors:Korasick, D.A, Beamer, L.J.
Deposit date:2022-07-13
Release date:2023-07-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance.
Febs J., 291, 2024
6NTT
DownloadVisualize
BU of 6ntt by Molmil
X-ray Crystal Structure of Soybean Trypsin Inhibitor (Kunitz) Complexed with 1,5-Disulfonyl Naphthalene
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Trypsin inhibitor A, naphthalene-1,5-disulfonic acid
Authors:McPherson, A.
Deposit date:2019-01-30
Release date:2019-03-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Lattice Interactions in Crystals of Soybean Trypsin Inhibitor (Kunitz) Produced by Inclusion of 1,5-Disulfonylnaphthalene
Cryst.Growth Des., 19, 2019
1Y4K
DownloadVisualize
BU of 1y4k by Molmil
Lipoxygenase-1 (Soybean) at 100K, N694G Mutant
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, FE (II) ION, ...
Authors:Chruszcz, M, Segraves, E, Holman, T.R, Minor, W.
Deposit date:2004-12-01
Release date:2005-12-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Kinetic, spectroscopic, and structural investigations of the soybean lipoxygenase-1 first-coordination sphere mutant, Asn694Gly.
Biochemistry, 45, 2006
7V4H
DownloadVisualize
BU of 7v4h by Molmil
Cryo-EM Structure of Glycine max glutamine synthetase GmGS Beta2
Descriptor: Glutamine synthetase
Authors:Xu, W, Chen, Y, Xing, Q, Huang, C.
Deposit date:2021-08-13
Release date:2022-05-18
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Assembly status transition offers an avenue for activity modulation of a supramolecular enzyme.
Elife, 10, 2021
7UJH
DownloadVisualize
BU of 7ujh by Molmil
Structure of the P130R single variant of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP and glycine
Descriptor: 1,2-ETHANEDIOL, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase
Authors:Korasick, D.A, Beamer, L.J.
Deposit date:2022-03-30
Release date:2023-04-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance.
Febs J., 291, 2024
7UJI
DownloadVisualize
BU of 7uji by Molmil
Structure of the P130R single variant of serine hydroxymethyltransferase 8 from Glycine max cultivar Essex complexed with PLP
Descriptor: 1,2-ETHANEDIOL, Serine hydroxymethyltransferase
Authors:Korasick, D.A, Beamer, L.J.
Deposit date:2022-03-30
Release date:2023-04-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional analysis of two SHMT8 variants associated with soybean cyst nematode resistance.
Febs J., 291, 2024
7BUR
DownloadVisualize
BU of 7bur by Molmil
Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin
Descriptor: CITRIC ACID, Chalcone synthase 1, NARINGENIN
Authors:Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T.
Deposit date:2020-04-08
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
7BUS
DownloadVisualize
BU of 7bus by Molmil
Chalcone synthase from Glycine max (L.) Merr (soybean)
Descriptor: Chalcone synthase
Authors:Imaizumi, R, Mameda, R, Takeshita, K, Waki, T, Kubo, H, Sakai, N, Nakata, S, Takahashi, S, Kataoka, K, Yamamoto, M, Yamashita, S, Nakayama, T.
Deposit date:2020-04-08
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Crystal structure of chalcone synthase, a key enzyme for isoflavonoid biosynthesis in soybean.
Proteins, 2020
9F4I
DownloadVisualize
BU of 9f4i by Molmil
Room temperature structure of Glycine max phyA in Pfr
Descriptor: PHYCOCYANOBILIN, Phytochrome A-2
Authors:Nagano, S, Hughes, J.
Deposit date:2024-04-28
Release date:2025-01-08
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Pr and Pfr structures of plant phytochrome A.
Nat Commun, 16, 2025
9ER4
DownloadVisualize
BU of 9er4 by Molmil
Room temperature structure of Glycine max phyA in Pr
Descriptor: PHYCOCYANOBILIN, Phytochrome A-2
Authors:Nagano, S.
Deposit date:2024-03-22
Release date:2025-01-08
Last modified:2025-07-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Pr and Pfr structures of plant phytochrome A.
Nat Commun, 16, 2025
2IUK
DownloadVisualize
BU of 2iuk by Molmil
Crystal structure of Soybean Lipoxygenase-D
Descriptor: FE (III) ION, SEED LIPOXYGENASE
Authors:Youn, B, Sellhorn, G.E, Mirchel, R.J, Gaffney, B.J, Grimes, H.D, Kang, C.
Deposit date:2006-06-05
Release date:2006-10-11
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Vegetative Soybean Lipoxygenase Vlx-B and Vlx-D, and Comparisons with Seed Isoforms Lox-1 and Lox-3.
Proteins, 65, 2006
2IUJ
DownloadVisualize
BU of 2iuj by Molmil
Crystal Structure of Soybean Lipoxygenase-B
Descriptor: FE (III) ION, LIPOXYGENASE L-5
Authors:Youn, B, Sellhorn, G.E, Mirchel, R.J, Gaffney, B.J, Grimes, H.D, Kang, C.
Deposit date:2006-06-05
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Vegetative Soybean Lipoxygenase Vlx-B and Vlx-D, and Comparisons with Seed Isoforms Lox-1 and Lox-3.
Proteins, 65, 2006
4MAF
DownloadVisualize
BU of 4maf by Molmil
Soybean ATP Sulfurylase
Descriptor: ADENOSINE-5'-PHOSPHOSULFATE, ATP sulfurylase
Authors:Herrmann, J, Ravilious, G.E, McKinney, S.E, Westfall, C.S, Lee, S.G, Krishnan, H.B, Jez, J.M.
Deposit date:2013-08-16
Release date:2014-03-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structure and mechanism of soybean ATP sulfurylase and the committed step in plant sulfur assimilation.
J.Biol.Chem., 289, 2014
1SBF
DownloadVisualize
BU of 1sbf by Molmil
SOYBEAN AGGLUTININ
Descriptor: CALCIUM ION, MANGANESE (II) ION, SOYBEAN AGGLUTININ, ...
Authors:Olsen, L.R, Dessen, A, Gupta, D, Sabesan, S, Brewer, C.F, Sacchettini, J.C.
Deposit date:1997-10-21
Release date:1998-04-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:X-ray crystallographic studies of unique cross-linked lattices between four isomeric biantennary oligosaccharides and soybean agglutinin.
Biochemistry, 36, 1997
1SBD
DownloadVisualize
BU of 1sbd by Molmil
SOYBEAN AGGLUTININ COMPLEXED WITH 2,4-PENTASACCHARIDE
Descriptor: CALCIUM ION, MANGANESE (II) ION, SOYBEAN AGGLUTININ, ...
Authors:Dessen, A, Olsen, L.R, Gupta, D, Sabesan, S, Brewer, C.F, Sacchettini, J.C.
Deposit date:1995-07-13
Release date:1998-04-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:X-ray crystallographic studies of unique cross-linked lattices between four isomeric biantennary oligosaccharides and soybean agglutinin.
Biochemistry, 36, 1997
2SBA
DownloadVisualize
BU of 2sba by Molmil
SOYBEAN AGGLUTININ COMPLEXED WITH 2,6-PENTASACCHARIDE
Descriptor: CALCIUM ION, Lectin, MANGANESE (II) ION, ...
Authors:Dessen, A, Gupta, D, Sabesan, S, Brewer, C.F, Sacchettini, J.C.
Deposit date:1998-12-03
Release date:1998-12-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray crystal structure of the soybean agglutinin cross-linked with a biantennary analog of the blood group I carbohydrate antigen.
Biochemistry, 34, 1995
1Q6E
DownloadVisualize
BU of 1q6e by Molmil
Crystal Structure of Soybean Beta-Amylase Mutant (E178Y) with Increased pH Optimum at pH 5.4
Descriptor: SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Hirata, A, Adachi, M, Sekine, A, Kang, Y.N, Utsumi, S, Mikami, B.
Deposit date:2003-08-13
Release date:2004-02-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
4N6A
DownloadVisualize
BU of 4n6a by Molmil
Soybean Serine Acetyltransferase Apoenzyme
Descriptor: PHOSPHATE ION, Serine Acetyltransferase Apoenzyme
Authors:Yi, H, Dey, S, Kumaran, S, Krishnan, H.B, Jez, J.M.
Deposit date:2013-10-11
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of soybean serine acetyltransferase and formation of the cysteine regulatory complex as a molecular chaperone.
J.Biol.Chem., 288, 2013
4N6B
DownloadVisualize
BU of 4n6b by Molmil
Soybean Serine Acetyltransferase Complexed with CoA
Descriptor: COENZYME A, Serine Acetyltransferase Apoenzyme
Authors:Yi, H, Dey, S, Kumaran, S, Krishnan, H.B, Jez, J.M.
Deposit date:2013-10-11
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.005 Å)
Cite:Structure of soybean serine acetyltransferase and formation of the cysteine regulatory complex as a molecular chaperone.
J.Biol.Chem., 288, 2013
1Q6G
DownloadVisualize
BU of 1q6g by Molmil
Crystal Structure of Soybean Beta-Amylase Mutant (N340T) with Increased pH Optimum
Descriptor: SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Hirata, A, Adachi, M, Sekine, A, Kang, Y.N, Utsumi, S, Mikami, B.
Deposit date:2003-08-13
Release date:2004-02-24
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Enzymatic Analysis of Soybean {beta}-Amylase Mutants with Increased pH Optimum
J.Biol.Chem., 279, 2004
4N69
DownloadVisualize
BU of 4n69 by Molmil
Soybean Serine Acetyltransferase Complexed with Serine
Descriptor: PHOSPHATE ION, SERINE, Serine Acetyltransferase Apoenzyme
Authors:Yi, H, Dey, S, Kumaran, S, Krishnan, H.B, Jez, J.M.
Deposit date:2013-10-11
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of soybean serine acetyltransferase and formation of the cysteine regulatory complex as a molecular chaperone.
J.Biol.Chem., 288, 2013
4D69
DownloadVisualize
BU of 4d69 by Molmil
SOYBEAN AGGLUTININ FROM GLYCINE MAX IN COMPLEX WITH THE ANTIGEN Tn
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LECTIN, ...
Authors:Madariaga, D, Martinez-Saez, N, Somovilla, V.J, Coelho, H, Valero-Gonzalez, J, Castro-Lopez, J, Asensio, J.L, Jimenez-Barbero, J, Busto, J.H, Avenoza, A, Marcelo, F, Hurtado-Guerrero, R, Corzana, F, Peregrina, J.M.
Deposit date:2014-11-10
Release date:2014-11-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Detection of Tumor-Associated Glycopeptides by Lectins: The Peptide Context Modulates Carbohydrate Recognition.
Acs Chem.Biol., 10, 2015
1SC6
DownloadVisualize
BU of 1sc6 by Molmil
Crystal Structure of W139G D-3-Phosphoglycerate dehydrogenase complexed with NAD+
Descriptor: D-3-phosphoglycerate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Bell, J.K, Grant, G.A, Banaszak, L.J.
Deposit date:2004-02-11
Release date:2005-02-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Multiconformational states in phosphoglycerate dehydrogenase
Biochemistry, 43, 2004
4Z25
DownloadVisualize
BU of 4z25 by Molmil
Mimivirus R135 (residues 51-702)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Putative GMC-type oxidoreductase R135
Authors:Klose, T, Rossmann, M.G.
Deposit date:2015-03-28
Release date:2015-06-03
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.339 Å)
Cite:A Mimivirus Enzyme that Participates in Viral Entry.
Structure, 23, 2015

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon