Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3O73
DownloadVisualize
BU of 3o73 by Molmil
Crystal structure of quinone reductase 2 in complex with the indolequinone MAC627
Descriptor: 5-[(4-aminobutyl)amino]-1,2-dimethyl-3-[(4-nitrophenoxy)methyl]-1H-indole-4,7-dione, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Dufour, M, Yan, C, Colucci, M.A, Siegel, D, Li, Y, De Matteis, C.I, Ross, D, Moody, C.J.
Deposit date:2010-07-30
Release date:2011-05-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanism-Based Inhibition of Quinone Reductase 2 (NQO2): Selectivity for NQO2 over NQO1 and Structural Basis for Flavoprotein Inhibition.
Chembiochem, 12, 2011
3NYE
DownloadVisualize
BU of 3nye by Molmil
Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with Imino-Arginine
Descriptor: (2E)-5-[(diaminomethylidene)amino]-2-iminopentanoic acid, D-Arginine Dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Fu, G, Weber, I.T.
Deposit date:2010-07-14
Release date:2010-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Conformational changes and substrate recognition in Pseudomonas aeruginosa D-arginine dehydrogenase.
Biochemistry, 49, 2010
3RLC
DownloadVisualize
BU of 3rlc by Molmil
Crystal structure of the read-through domain from bacteriophage Qbeta A1 protein, hexagonal crystal form
Descriptor: A1 protein, TETRAETHYLENE GLYCOL
Authors:Rumnieks, J, Tars, K.
Deposit date:2011-04-19
Release date:2011-09-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the read-through domain from bacteriophage Qbeta A1 protein
Protein Sci., 20, 2011
3R6Y
DownloadVisualize
BU of 3r6y by Molmil
Crystal structure of chymotrypsin-treated aspartase from Bacillus sp. YM55-1
Descriptor: Aspartase, CALCIUM ION
Authors:Fibriansah, G, Puthan Veetil, V, Poelarends, G.J, Thunnissen, A.-M.W.H.
Deposit date:2011-03-22
Release date:2011-07-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the catalytic mechanism of aspartate ammonia lyase.
Biochemistry, 50, 2011
3ODJ
DownloadVisualize
BU of 3odj by Molmil
Crystal structure of H. influenzae rhomboid GlpG with disordered loop 4, helix 5 and loop 5
Descriptor: Rhomboid protease glpG
Authors:Brooks, C.L, Lazareno-Saez, C, Lamoureux, J.S, Mak, M.W, Lemieux, M.J.
Deposit date:2010-08-11
Release date:2011-02-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Insights into Substrate Gating in H. influenzae Rhomboid.
J.Mol.Biol., 407, 2011
2PID
DownloadVisualize
BU of 2pid by Molmil
Crystal structure of human mitochondrial tyrosyl-tRNA synthetase in complex with an adenylate analog
Descriptor: 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, Tyrosyl-tRNA synthetase
Authors:Bonnefond, L, Frugier, M, Touze, E, Lorber, B, Florentz, C, Giege, R, Sauter, C, Rudinger-Thirion, J.
Deposit date:2007-04-13
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of Human Mitochondrial Tyrosyl-tRNA Synthetase Reveals Common and Idiosyncratic Features.
Structure, 15, 2007
3SM8
DownloadVisualize
BU of 3sm8 by Molmil
Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with an (N5) Flavin Adduct
Descriptor: FAD-dependent catabolic D-arginine dehydrogenase, DauA, GLYCEROL, ...
Authors:Fu, G, Weber, I.T.
Deposit date:2011-06-27
Release date:2011-07-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Atomic-resolution structure of an N5 flavin adduct in D-arginine dehydrogenase.
Biochemistry, 50, 2011
2PU3
DownloadVisualize
BU of 2pu3 by Molmil
Structural adaptation of endonuclease I from the cold-adapted and halophilic bacterium Vibrio salmonicida
Descriptor: CHLORIDE ION, Endonuclease I, MAGNESIUM ION
Authors:Altermark, B, Helland, R, Moe, E, Willassen, N.P, Smalas, A.O.
Deposit date:2007-05-08
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural adaptation of endonuclease I from the cold-adapted and halophilic bacterium Vibrio salmonicida.
Acta Crystallogr.,Sect.D, 64, 2008
2QA1
DownloadVisualize
BU of 2qa1 by Molmil
Crystal structure of PgaE, an aromatic hydroxylase involved in angucycline biosynthesis
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Koskiniemi, H, Dobritzsch, D, Metsa-Ketela, M, Kallio, P, Niemi, J, Schneider, G.
Deposit date:2007-06-14
Release date:2007-08-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of two aromatic hydroxylases involved in the early tailoring steps of angucycline biosynthesis
J.Mol.Biol., 372, 2007
2QB0
DownloadVisualize
BU of 2qb0 by Molmil
Structure of the 2TEL crystallization module fused to T4 lysozyme with an Ala-Gly-Pro linker.
Descriptor: MANGANESE (II) ION, Transcription factor ETV6, Transcription factor ETV6,Endolysin
Authors:Nauli, S, Bowie, J.U.
Deposit date:2007-06-15
Release date:2008-10-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Polymer-driven crystallization.
Protein Sci., 16, 2007
5F2B
DownloadVisualize
BU of 5f2b by Molmil
Expanding Nature's Catalytic Repertoire -Directed Evolution of an Artificial Metalloenzyme for In Vivo Metathesis
Descriptor: SULFATE ION, Streptavidin, [1-[4-[[5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]methyl]-2,6-dimethyl-phenyl]-3-(2,4,6-trimethylphenyl)-4,5-dihydroimidazol-1-ium-2-yl]-bis(chloranyl)ruthenium
Authors:Heinisch, T, Jeschek, M, Reuter, R, Trindler, C, Panke, S, Ward, T.R.
Deposit date:2015-12-01
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Directed evolution of artificial metalloenzymes for in vivo metathesis.
Nature, 537, 2016
5M42
DownloadVisualize
BU of 5m42 by Molmil
Structure of Thermus thermophilus L-proline dehydrogenase lacking alpha helices A, B and C
Descriptor: FLAVIN MONONUCLEOTIDE, Proline dehydrogenase
Authors:Martinez-Julvez, M, Huijbers, M.M.E, van Berkel, W.J.H, Medina, M.
Deposit date:2016-10-18
Release date:2017-03-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Proline dehydrogenase from Thermus thermophilus does not discriminate between FAD and FMN as cofactor.
Sci Rep, 7, 2017
5F7K
DownloadVisualize
BU of 5f7k by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with Nanobody Nb-ER19
Descriptor: 1,2-ETHANEDIOL, Adhesin binding fucosylated histo-blood group antigen, Nanobody Nb-ER19, ...
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-08
Release date:2016-01-20
Last modified:2016-12-28
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016
5F7Y
DownloadVisualize
BU of 5f7y by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A type-1 hexasaccharide
Descriptor: Adhesin binding fucosylated histo-blood group antigen, Nanobody Nb-ER19, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-08
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016
5F7L
DownloadVisualize
BU of 5f7l by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with Nanobody Nb-ER14
Descriptor: Adhesin binding fucosylated histo-blood group antigen, Nanobody Nb-ER14, SULFATE ION
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-08
Release date:2016-01-20
Last modified:2016-01-27
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016
5F8Q
DownloadVisualize
BU of 5f8q by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain S831 in complex with Nanobody Nb-ER19
Descriptor: Adhesin binding fucosylated histo-blood group antigen,Adhesin,Adhesin binding fucosylated histo-blood group antigen, Nanobody Nb-ER19
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-09
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016
5F9D
DownloadVisualize
BU of 5f9d by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain P436 in complex with Lewis b blood group B heptasaccharide
Descriptor: Adhesin binding fucosylated histo-blood group antigen,Adhesin,Adhesin binding fucosylated histo-blood group antigen, Nanobody Nb-ER19, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-09
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016
5F7W
DownloadVisualize
BU of 5f7w by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group B Lewis b heptasaccharide
Descriptor: Adhesin binding fucosylated histo-blood group antigen, Nanobody Nb-ER19, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-08
Release date:2016-01-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016
5NH6
DownloadVisualize
BU of 5nh6 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 Complexed with one Mg2+ ion and xylitol
Descriptor: MAGNESIUM ION, SULFATE ION, Xylitol, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NH5
DownloadVisualize
BU of 5nh5 by Molmil
Crystal structure of native xylose isomerase from Piromyces E2
Descriptor: CALCIUM ION, FE (II) ION, GLYCEROL, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NH8
DownloadVisualize
BU of 5nh8 by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Ca2+ ions and xylose
Descriptor: CALCIUM ION, D-xylose, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHM
DownloadVisualize
BU of 5nhm by Molmil
Crystal structure of apo xylose isomerase from Piromyces E2
Descriptor: ACETIC ACID, GLYCEROL, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHE
DownloadVisualize
BU of 5nhe by Molmil
Crystal structure of xylose isomerase from Piromyces E2 in complex with two Cd2+ ions and xylose
Descriptor: CADMIUM ION, D-xylose, SULFATE ION, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5NHA
DownloadVisualize
BU of 5nha by Molmil
Crystal structure of xylose isomerase from Piromyces sp. E2 in complex with two Mn2+ ions and sorbitol
Descriptor: MANGANESE (II) ION, SULFATE ION, Xylose isomerase, ...
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2017-03-21
Release date:2017-11-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Metal Dependence of the Xylose Isomerase from Piromyces sp. E2 Explored by Activity Profiling and Protein Crystallography.
Biochemistry, 56, 2017
5F97
DownloadVisualize
BU of 5f97 by Molmil
Blood group antigen binding adhesin BabA of Helicobacter pylori strain A730 in complex with blood group A type 1 hexasaccharide
Descriptor: Adhesin binding fucosylated histo-blood group antigen,Adhesin,Adhesin binding fucosylated histo-blood group antigen, Nanbody Nb-ER19, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Moonens, K, Gideonsson, P, Subedi, S, Romao, E, Oscarson, S, Muyldermans, S, Boren, T, Remaut, H.
Deposit date:2015-12-09
Release date:2016-01-20
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structural Insights into Polymorphic ABO Glycan Binding by Helicobacter pylori.
Cell Host Microbe, 19, 2016

225946

数据于2024-10-09公开中

PDB statisticsPDBj update infoContact PDBjnumon