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8T00
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BU of 8t00 by Molmil
Reconstituted E. coli RNA polymerase post-termination complex on negatively-supercoiled DNA: closed duplex DNA (rPTCc)
Descriptor: DNA (26-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Brewer, J.J, Darst, S.A, Campbell, E.A.
Deposit date:2023-05-31
Release date:2025-04-02
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (4.69 Å)
Cite:RapA opens the RNA polymerase clamp to disrupt post-termination complexes and prevent cytotoxic R-loop formation.
Nat.Struct.Mol.Biol., 32, 2025
8SZW
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BU of 8szw by Molmil
Reconstituted E. coli RNA polymerase post-termination complex on negatively-supercoiled DNA: open duplex DNA (rPTCo)
Descriptor: DNA (25-MER), DNA (27-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Brewer, J.J, Darst, S.A, Campbell, E.A.
Deposit date:2023-05-30
Release date:2025-04-02
Last modified:2025-04-30
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:RapA opens the RNA polymerase clamp to disrupt post-termination complexes and prevent cytotoxic R-loop formation.
Nat.Struct.Mol.Biol., 32, 2025
8ODT
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BU of 8odt by Molmil
Structure of TolQR complex from E.coli
Descriptor: Tol-Pal system protein TolQ, Tol-Pal system protein TolR
Authors:Webby, M.N, Kleanthous, C, Press, C.E.
Deposit date:2023-03-09
Release date:2023-11-01
Last modified:2023-11-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Tunable force transduction through the Escherichia coli cell envelope.
Proc.Natl.Acad.Sci.USA, 120, 2023
6PYC
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BU of 6pyc by Molmil
Structure of kappa-on-heavy (KoH) antibody Fab bound to the cardiac hormone marinobufagenin
Descriptor: (3beta,5beta,14alpha,15beta)-3,5-dihydroxy-14,15-epoxybufa-20,22-dienolide, KoH body Fab heavy chain, KoH body Fab light chain, ...
Authors:Franklin, M.C, Macdonald, L.E, McWhirter, J, Murphy, A.J.
Deposit date:2019-07-29
Release date:2019-12-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Kappa-on-Heavy (KoH) bodies are a distinct class of fully-human antibody-like therapeutic agents with antigen-binding properties.
Proc.Natl.Acad.Sci.USA, 117, 2020
6NO1
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BU of 6no1 by Molmil
ADP bound to K46bE mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Succinate--CoA ligase [ADP-forming] subunit beta
Authors:Huang, J, Fraser, M.E.
Deposit date:2019-01-15
Release date:2019-07-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:ATP-specificity of succinyl-CoA synthetase from Blastocystis hominis.
Acta Crystallogr D Struct Biol, 75, 2019
9BE5
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BU of 9be5 by Molmil
Cryo-EM structure of Human Nucleosome collected by EPU on Glacios at 3.3 Angstrom resolution
Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2A type 1-B/E, ...
Authors:Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V.
Deposit date:2024-04-14
Release date:2025-04-30
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of Human Nucleosome collected by EPU on Glacios at 3.3 Angstrom resolution
To Be Published
9BE6
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BU of 9be6 by Molmil
Cryo-EM structure of Human Nucleosome collected by Leginon on Krios at 3.0 Angstrom resolution
Descriptor: DNA (145-MER), Histone H2A type 1, Histone H2A type 1-B/E, ...
Authors:Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V.
Deposit date:2024-04-14
Release date:2025-04-30
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structure of Human Nucleosome collected by Leginon on Krios at 3.0 Angstrom resolution
To Be Published
6NO4
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BU of 6no4 by Molmil
ADP bound to L227bF mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Succinate--CoA ligase [ADP-forming] subunit beta
Authors:Huang, J, Fraser, M.E.
Deposit date:2019-01-15
Release date:2019-07-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:ATP-specificity of succinyl-CoA synthetase from Blastocystis hominis.
Acta Crystallogr D Struct Biol, 75, 2019
8QIC
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BU of 8qic by Molmil
Structure-based identification of salicylic acid derivatives as malarial threonyl tRNA-synthetase inhibitors
Descriptor: 2-oxidanyl-5-[[4-(phenylmethyl)phenyl]sulfamoyl]benzoic acid, GLYCEROL, Threonine--tRNA ligase, ...
Authors:Rodriguez, J.A, Parisini, E.
Deposit date:2023-09-13
Release date:2024-04-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based identification of salicylic acid derivatives as malarial threonyl tRNA-synthetase inhibitors.
Plos One, 19, 2024
8WDT
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BU of 8wdt by Molmil
Crystal structure of the human adenosine A2A receptor in complex with photoresponsive ligand photoNECA(blue)
Descriptor: (2S,3S,4R,5R)-5-(6-amino-2-((E)-phenyldiazenyl)-9H-purin-9-yl)-N-ethyl-3,4-dihydroxytetrahydrofuran-2-carboxamide, Adenosine receptor A2a, Antibody Fab fragment heavy chain, ...
Authors:Araya, T, Asada, H, Iwata, S, Im, D.H.
Deposit date:2023-09-16
Release date:2024-01-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.34 Å)
Cite:Crystal structure reveals the binding mode and selectivity of a photoswitchable ligand for the adenosine A 2A receptor.
Biochem.Biophys.Res.Commun., 695, 2023
6GM2
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BU of 6gm2 by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant E282D
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2018-05-24
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
9DJ8
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BU of 9dj8 by Molmil
RNA-nsp9 bound to the NiRAN domain of the E-RTC with an empty G-pocket
Descriptor: ADENOSINE MONOPHOSPHATE, Non-structural protein 9, RNA-directed RNA polymerase, ...
Authors:Small, G.I, Darst, S.A, Campbell, E.A.
Deposit date:2024-09-06
Release date:2025-03-19
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Matters arising: There is no structure of the catalytic intermediate of GTP-mediated mRNA capping by the SARS-CoV-2 NiRAN domain, and thus the mechanism remains unknown
To Be Published
9DP5
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BU of 9dp5 by Molmil
Crystal Structure of Hydra Adenosine Deaminase Acting on RNA (ADAR) Deaminase Domain
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Double-stranded RNA-specific editase Adar-like, ...
Authors:Fisher, A.J, Wilcox, X.E.
Deposit date:2024-09-20
Release date:2025-03-26
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Phylogenetic and structural analysis of Hydra ADAR.
Arch.Biochem.Biophys., 767, 2025
6QE6
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BU of 6qe6 by Molmil
Structure of M. capricolum TrmK in complex with the natural cofactor product S-adenosyl-homocysteine (SAH)
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (Adenine(22)-N(1))-methyltransferase
Authors:Oerum, S, Catala, M, Atdjian, C, Brachet, F, Ponchon, L, Barraud, P, Iannazzo, L, Droogmans, L, Braud, E, Etheve-Quelquejeu, M, Tisne, C.
Deposit date:2019-01-04
Release date:2019-03-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Bisubstrate analogues as structural tools to investigate m6A methyltransferase active sites.
Rna Biol., 16, 2019
6GLZ
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BU of 6glz by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant C299D
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2018-05-24
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
6GM3
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BU of 6gm3 by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant R286A
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2018-05-24
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
1ANJ
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BU of 1anj by Molmil
ALKALINE PHOSPHATASE (K328H)
Descriptor: ALKALINE PHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Murphy, J.E, Tibbitts, T.T, Kantrowitz, E.R.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutations at positions 153 and 328 in Escherichia coli alkaline phosphatase provide insight towards the structure and function of mammalian and yeast alkaline phosphatases.
J.Mol.Biol., 253, 1995
1ANI
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BU of 1ani by Molmil
ALKALINE PHOSPHATASE (D153H, K328H)
Descriptor: ALKALINE PHOSPHATASE, PHOSPHATE ION, ZINC ION
Authors:Murphy, J.E, Tibbitts, T.T, Kantrowitz, E.R.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mutations at positions 153 and 328 in Escherichia coli alkaline phosphatase provide insight towards the structure and function of mammalian and yeast alkaline phosphatases.
J.Mol.Biol., 253, 1995
8HFD
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BU of 8hfd by Molmil
Crystal structure of allantoinase from E. coli BL21
Descriptor: Allantoinase, DI(HYDROXYETHYL)ETHER, ZINC ION
Authors:Lin, E.S, Huang, H.Y, Yang, P.C, Liu, H.W, Huang, C.Y.
Deposit date:2022-11-10
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal Structure of Allantoinase from Escherichia coli BL21: A Molecular Insight into a Role of the Active Site Loops in Catalysis.
Molecules, 28, 2023
8TRM
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BU of 8trm by Molmil
Actin 1 from T. gondii in filaments bound to MgADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, MAGNESIUM ION
Authors:Hvorecny, K.L, Sladewski, T.E, Heaslip, A.T, Kollman, J.M.
Deposit date:2023-08-09
Release date:2024-03-06
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Toxoplasma gondii actin filaments are tuned for rapid disassembly and turnover.
Nat Commun, 15, 2024
6GP1
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BU of 6gp1 by Molmil
Structure of mEos4b in the red long-lived dark state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.504 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6GM5
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BU of 6gm5 by Molmil
[FeFe]-hydrogenase HydA1 from Chlamydomonas reinhardtii,variant E141A
Descriptor: CHLORIDE ION, Fe-hydrogenase, IRON/SULFUR CLUSTER, ...
Authors:Duan, J, Engelbrecht, V, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2018-05-24
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
6NO2
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BU of 6no2 by Molmil
ADP bound to K114bD mutant ATP-grasp fold of Blastocystis hominis succinyl-CoA synthetase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Huang, J, Fraser, M.E.
Deposit date:2019-01-15
Release date:2019-07-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.159 Å)
Cite:ATP-specificity of succinyl-CoA synthetase from Blastocystis hominis.
Acta Crystallogr D Struct Biol, 75, 2019
6GP0
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BU of 6gp0 by Molmil
Structure of mEos4b in the red fluorescent state
Descriptor: Green to red photoconvertible GFP-like protein EosFP
Authors:De Zitter, E, Adam, V, Byrdin, M, Van Meervelt, L, Dedecker, P, Bourgeois, D.
Deposit date:2018-06-04
Release date:2019-05-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.
Nat.Methods, 16, 2019
6QDV
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BU of 6qdv by Molmil
Human post-catalytic P complex spliceosome
Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ...
Authors:Fica, S.M, Oubridge, C, Wilkinson, M.E, Newman, A.J, Nagai, K.
Deposit date:2019-01-03
Release date:2019-02-20
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A human postcatalytic spliceosome structure reveals essential roles of metazoan factors for exon ligation.
Science, 363, 2019

238582

数据于2025-07-09公开中

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