Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1CAD
DownloadVisualize
BU of 1cad by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
7O6E
DownloadVisualize
BU of 7o6e by Molmil
2.12 A cryo-EM structure of Mycobacterium tuberculosis Ferritin
Descriptor: Ferritin BfrB
Authors:Gijsbers, A, Zhang, Y, Gao, Y, Peters, P.J, Ravelli, R.B.G.
Deposit date:2021-04-10
Release date:2021-05-19
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Mycobacterium tuberculosis ferritin: a suitable workhorse protein for cryo-EM development.
Acta Crystallogr D Struct Biol, 77, 2021
1C9K
DownloadVisualize
BU of 1c9k by Molmil
THE THREE DIMENSIONAL STRUCTURE OF ADENOSYLCOBINAMIDE KINASE/ ADENOSYLCOBINAMIDE PHOSPHATE GUALYLYLTRANSFERASE (COBU) COMPLEXED WITH GMP: EVIDENCE FOR A SUBSTRATE INDUCED TRANSFERASE ACTIVE SITE
Descriptor: ADENOSYLCOBINAMIDE KINASE, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ...
Authors:Thompson, T.B, Thomas, M.G, Esclante-Semerena, J.C, Rayment, I.
Deposit date:1999-08-02
Release date:1999-08-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase (CobU) complexed with GMP: evidence for a substrate-induced transferase active site.
Biochemistry, 38, 1999
1CAA
DownloadVisualize
BU of 1caa by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1CDG
DownloadVisualize
BU of 1cdg by Molmil
NUCLEOTIDE SEQUENCE AND X-RAY STRUCTURE OF CYCLODEXTRIN GLYCOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 IN A MALTOSE-DEPENDENT CRYSTAL FORM
Descriptor: CALCIUM ION, CYCLODEXTRIN GLYCOSYL-TRANSFERASE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Lawson, C.L, Van Montfort, R, Strokopytov, B.V, Kalk, K.H, Rozeboom, H.J, Dijkstra, B.W.
Deposit date:1993-08-02
Release date:1994-01-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Nucleotide sequence and X-ray structure of cyclodextrin glycosyltransferase from Bacillus circulans strain 251 in a maltose-dependent crystal form.
J.Mol.Biol., 236, 1994
1C4D
DownloadVisualize
BU of 1c4d by Molmil
GRAMICIDIN CSCL COMPLEX
Descriptor: CESIUM ION, CHLORIDE ION, GRAMICIDIN A, ...
Authors:Wallace, B.A.
Deposit date:1999-06-04
Release date:2000-01-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Gramicidin Pore: Crystal Structure of a Cesium Complex.
Science, 241, 1988
1C11
DownloadVisualize
BU of 1c11 by Molmil
INTERCALATED D(TCCCGTTTCCA) DIMER, NMR, 7 STRUCTURES
Descriptor: DNA (5'-D(*TP*CP*CP*CP*GP*TP*TP*TP*CP*CP*A)-3')
Authors:Gallego, J, Chou, S.H, Reid, B.R.
Deposit date:1998-07-15
Release date:1998-07-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Centromeric pyrimidine strands fold into an intercalated motif by forming a double hairpin with a novel T:G:G:T tetrad: solution structure of the d(TCCCGTTTCCA) dimer.
J.Mol.Biol., 273, 1997
1C9B
DownloadVisualize
BU of 1c9b by Molmil
CRYSTAL STRUCTURE OF A HUMAN TBP CORE DOMAIN-HUMAN TFIIB CORE DOMAIN COMPLEX BOUND TO AN EXTENDED, MODIFIED ADENOVIRAL MAJOR LATE PROMOTER (ADMLP)
Descriptor: ADMLP TATA-BOX DNA CONTAINING IIB RECOGNITION ELEMENT, GENERAL TRANSCRIPTION FACTOR IIB, TATA BOX BINDING PROTEIN
Authors:Tsai, F.T.F, Sigler, P.B.
Deposit date:1999-08-01
Release date:2000-01-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of preinitiation complex assembly on human pol II promoters.
EMBO J., 19, 2000
1IMW
DownloadVisualize
BU of 1imw by Molmil
Peptide Antagonist of IGFBP-1
Descriptor: IGFBP-1 antagonist
Authors:Lowman, H.B, Chen, Y.M, Skelton, N.J, Mortensen, D.L, Tomlinson, E.E, Sadick, M.D, Robinson, I.C, Clark, R.G.
Deposit date:2001-05-11
Release date:2001-05-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure-function analysis of a phage display-derived peptide that binds to insulin-like growth factor binding protein 1.
Biochemistry, 40, 2001
8A3K
DownloadVisualize
BU of 8a3k by Molmil
X-ray crystal structure of a de novo designed single-chain antiparallel 4-helix coiled-coil bundle, sc-apCC-4
Descriptor: sc-apCC-4
Authors:Albanese, K.I, Mylemans, B, Naudin, E.A, Woolfson, D.N.
Deposit date:2022-06-08
Release date:2022-10-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:From peptides to proteins: coiled-coil tetramers to single-chain 4-helix bundles.
Chem Sci, 13, 2022
5IEM
DownloadVisualize
BU of 5iem by Molmil
NMR structure of the 5'-terminal hairpin of the 7SK snRNA
Descriptor: 7SK snRNA
Authors:Bourbigot, S, Dock-Bregeon, A.C, Coutant, J, Kieffer, B, Lebars, I.
Deposit date:2016-02-25
Release date:2016-11-02
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution structure of the 5'-terminal hairpin of the 7SK small nuclear RNA.
RNA, 22, 2016
7N2P
DownloadVisualize
BU of 7n2p by Molmil
AS4.3-RNASEH2b-HLA*B27
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, AS4.3 T cell receptor alpha chain, AS4.3 T cell receptor beta chain, ...
Authors:Yang, X, Jude, K.M, Garcia, K.C.
Deposit date:2021-05-29
Release date:2022-12-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides.
Nature, 612, 2022
7NUI
DownloadVisualize
BU of 7nui by Molmil
Crystal structure of HLA-B*08:01 in complex with ELRSRYWAI viral peptide
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
Authors:Mavridis, G, Giastas, P, Mpakali, A.
Deposit date:2021-03-12
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of HLA-B*08:01 in complex with ELRSRYWAI viral peptide
To Be Published
1SKT
DownloadVisualize
BU of 1skt by Molmil
SOLUTION STRUCTURE OF APO N-DOMAIN OF TROPONIN C, NMR, 40 STRUCTURES
Descriptor: TROPONIN-C
Authors:Tsuda, S, Miura, A, Gagne, S.M, Spyracopoulos, L, Sykes, B.D.
Deposit date:1998-04-06
Release date:1998-12-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Low-temperature-induced structural changes in the Apo regulatory domain of skeletal muscle troponin C.
Biochemistry, 38, 1999
7NXA
DownloadVisualize
BU of 7nxa by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 B.1.351 variant Spike glycoprotein in complex with COVOX-222 and EY6A Fabs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COVOX-222 Fab heavy chain, COVOX-222 Fab light chain, ...
Authors:Zhou, D, Ren, J, Stuart, D.
Deposit date:2021-03-17
Release date:2021-04-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Antibody evasion by the P.1 strain of SARS-CoV-2.
Cell, 184, 2021
7NRC
DownloadVisualize
BU of 7nrc by Molmil
Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
Descriptor: 18S rRNA (1771-MER), 25S rRNA (3184-MER), 40S ribosomal protein S0-A, ...
Authors:Pochopien, A.A, Beckert, B, Wilson, D.N.
Deposit date:2021-03-03
Release date:2021-05-05
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of Gcn1 bound to stalled and colliding 80S ribosomes.
Proc.Natl.Acad.Sci.USA, 118, 2021
4WOJ
DownloadVisualize
BU of 4woj by Molmil
Aspartate Semialdehyde Dehydrogenase from Francisella tularensis
Descriptor: Aspartate semialdehyde dehydrogenase, SODIUM ION, SULFATE ION
Authors:Mank, N.J, Arnette, A.K, Klapper, V.G, Chruszcz, M.
Deposit date:2014-10-15
Release date:2015-10-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of aspartate b-semialdehyde dehydrogenase from Francisella tularensis
Acta Crystallogr.,Sect.F, 74, 2018
4WSA
DownloadVisualize
BU of 4wsa by Molmil
Crystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form)
Descriptor: Influenza B vRNA promoter 3' end, Influenza B vRNA promoter 5' end, PA, ...
Authors:Reich, S, Guilligay, D, Pflug, A, Cusack, S.
Deposit date:2014-10-26
Release date:2014-11-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into cap-snatching and RNA synthesis by influenza polymerase.
Nature, 516, 2014
2SN3
DownloadVisualize
BU of 2sn3 by Molmil
STRUCTURE OF SCORPION TOXIN VARIANT-3 AT 1.2 ANGSTROMS RESOLUTION
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, SCORPION NEUROTOXIN (VARIANT 3)
Authors:Zhao, B, Carson, M, Ealick, S.E, Bugg, C.E.
Deposit date:1992-02-20
Release date:1994-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of scorpion toxin variant-3 at 1.2 A resolution.
J.Mol.Biol., 227, 1992
7NRD
DownloadVisualize
BU of 7nrd by Molmil
Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNA
Descriptor: 25S rRNA (3184-MER), 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Pochopien, A.A, Beckert, B, Wilson, D.N.
Deposit date:2021-03-03
Release date:2021-04-14
Method:ELECTRON MICROSCOPY (4.36 Å)
Cite:Structure of Gcn1 bound to stalled and colliding 80S ribosomes.
Proc.Natl.Acad.Sci.USA, 118, 2021
4KCF
DownloadVisualize
BU of 4kcf by Molmil
X-ray Structure of a KijD3 in Complex with FMN and dTDP-3-amino-2,3,6-trideoxy-4-keto-3-methyl-D-glucose
Descriptor: FAD-dependent oxidoreductase, FLAVIN MONONUCLEOTIDE, [(2R,4S,6R)-4-azanyl-4,6-dimethyl-5,5-bis(oxidanyl)oxan-2-yl] [[(2R,3S,5R)-5-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
Authors:Holden, H.M, Thoden, J.B, Branch, M.C, Zimmer, A.L, Bruender, N.A.
Deposit date:2013-04-24
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Active site architecture of a sugar N-oxygenase.
Biochemistry, 52, 2013
4KPH
DownloadVisualize
BU of 4kph by Molmil
Structure of the Fab fragment of N62, a protective monoclonal antibody to the nonreducing end of Francisella tularensis O-antigen
Descriptor: ACETATE ION, N62 heavy chain, N62 light chain
Authors:Lu, Z, Rynkiewicz, M.J, Yang, C.-Y, Madico, G, Perkins, H.M, Wang, Q, Costello, C.E, Zaia, J, Seaton, B.A, Sharon, J.
Deposit date:2013-05-13
Release date:2013-07-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:The binding sites of monoclonal antibodies to the non-reducing end of Francisella tularensis O-antigen accommodate mainly the terminal saccharide.
Immunology, 140, 2013
6JCE
DownloadVisualize
BU of 6jce by Molmil
NMR solution and X-ray crystal structures of a DNA containing both right-and left-handed parallel-stranded G-quadruplexes
Descriptor: 29-mer DNA
Authors:Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2019-01-28
Release date:2019-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
4WP4
DownloadVisualize
BU of 4wp4 by Molmil
Hev b 6.02 (hevein) extracted from surgical gloves
Descriptor: Pro-hevein, THIOUREA
Authors:Galicia, C, Rodriguez-Romero, A.
Deposit date:2014-10-17
Release date:2015-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Impact of the vulcanization process on the structural characteristics and IgE recognition of two allergens, Hev b 2 and Hev b 6.02, extracted from latex surgical gloves.
Mol.Immunol., 65, 2015
4KEP
DownloadVisualize
BU of 4kep by Molmil
Crystal structure of 4-pyridoxolactonase, wild-type
Descriptor: 1,2-ETHANEDIOL, 4-pyridoxolactonase, ACETATE ION, ...
Authors:Kobayashi, J, Yoshikane, Y, Baba, S, Mizutani, K, Takahashi, N, Mikami, B, Yagi, T.
Deposit date:2013-04-26
Release date:2014-04-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure of 4-pyridoxolactonase from Mesorhizobium loti.
Acta Crystallogr.,Sect.F, 70, 2014

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon