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PDB: 575 results

7DSK
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BU of 7dsk by Molmil
Overall structure of the LAT1-4F2hc bound with JX-075
Descriptor: (2~{S})-2-azanyl-7-(naphthalen-1-ylmethoxy)-3,4-dihydro-1~{H}-naphthalene-2-carboxylic acid, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R.H, Li, Y.N, Zhang, Y.Y, Zhong, X.Y, Zhou, Q.
Deposit date:2020-12-31
Release date:2021-03-10
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Mechanism of substrate transport and inhibition of the human LAT1-4F2hc amino acid transporter.
Cell Discov, 7, 2021
7DSN
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BU of 7dsn by Molmil
Overall structure of the LAT1-4F2hc bound with JX-119
Descriptor: (2~{S})-2-azanyl-7-[[2-(1,3-benzoxazol-2-yl)phenyl]methoxy]-3,4-dihydro-1~{H}-naphthalene-2-carboxylic acid, 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R.H, Li, Y.N, Zhang, Y.Y, Zhong, X.Y, Zhou, Q.
Deposit date:2020-12-31
Release date:2021-03-10
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mechanism of substrate transport and inhibition of the human LAT1-4F2hc amino acid transporter.
Cell Discov, 7, 2021
1HX0
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BU of 1hx0 by Molmil
Structure of pig pancreatic alpha-amylase complexed with the "truncate" acarbose molecule (pseudotrisaccharide)
Descriptor: 1,2-ETHANEDIOL, 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ALPHA AMYLASE (PPA), ...
Authors:Qian, M, Payan, F.
Deposit date:2001-01-11
Release date:2001-08-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Enzyme-catalyzed condensation reaction in a mammalian alpha-amylase. High-resolution structural analysis of an enzyme-inhibitor complex
Biochemistry, 40, 2001
7DF1
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BU of 7df1 by Molmil
Crystal structure of human CD98 heavy chain extracellular domain in complex with S1-F4 scFv
Descriptor: 4F2 cell-surface antigen heavy chain, IGL c2062_light_IGKV4-1_IGKJ5, S1-F4 VH
Authors:Liu, X, Ding, J, Sui, J, Tian, X.
Deposit date:2020-11-06
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.806 Å)
Cite:An anti-CD98 antibody displaying pH-dependent Fc-mediated tumour-specific activity against multiple cancers in CD98-humanized mice.
Nat Biomed Eng, 2022
7EPZ
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BU of 7epz by Molmil
Overall structure of Erastin-bound xCT-4F2hc complex
Descriptor: 1,2-DISTEAROYL-SN-GLYCERO-3-PHOSPHATE, 2-[(1S)-1-[4-[2-(4-chloranylphenoxy)ethanoyl]piperazin-1-yl]ethyl]-3-(2-ethoxyphenyl)quinazolin-4-one, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Yan, R.H, Li, Y.N, Zhang, Y.Y, Chi, X.M, Zhou, Q.
Deposit date:2021-04-28
Release date:2022-04-06
Last modified:2022-07-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The structure of erastin-bound xCT-4F2hc complex reveals molecular mechanisms underlying erastin-induced ferroptosis.
Cell Res., 32, 2022
7CMI
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BU of 7cmi by Molmil
The LAT2-4F2hc complex in complex with leucine
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4F2 cell-surface antigen heavy chain, ...
Authors:Yan, R.H, Zhou, J.Y, Li, Y.N, Lei, J.L, Zhou, Q.
Deposit date:2020-07-27
Release date:2020-12-23
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insight into the substrate recognition and transport mechanism of the human LAT2-4F2hc complex.
Cell Discov, 6, 2020
7CGT
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BU of 7cgt by Molmil
RAMEB COMPLEX OF CYCLODEXTRIN GLYCOSYLTRANSFERASE MUTANT
Descriptor: CALCIUM ION, CYCLODEXTRIN GLYCOSYLTRANSFERASE
Authors:Parsiegla, G, Schulz, G.E.
Deposit date:1998-06-06
Release date:1998-08-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Substrate binding to a cyclodextrin glycosyltransferase and mutations increasing the gamma-cyclodextrin production.
Eur.J.Biochem., 255, 1998
5YKB
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BU of 5ykb by Molmil
The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site conformation
Descriptor: CALCIUM ION, MAGNESIUM ION, Trehalose synthase
Authors:Chow, S.Y, Hsieh, Y.C, Liaw, S.H.
Deposit date:2017-10-13
Release date:2017-10-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site topology
Acta Crystallogr F Struct Biol Commun, 73, 2017
5ZCC
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BU of 5zcc by Molmil
Crystal structure of Alpha-glucosidase in complex with maltose
Descriptor: Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kato, K, Saburi, W, Yao, M.
Deposit date:2018-02-16
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.704 Å)
Cite:Function and structure of GH13_31 alpha-glucosidase with high alpha-(1→4)-glucosidic linkage specificity and transglucosylation activity.
FEBS Lett., 592, 2018
5Z0U
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BU of 5z0u by Molmil
Thermoactinomyces vulgaris R-47 alpha-amylase I (TVA I) 11 residues (from A363 to N373) deletion mutant (Del11)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Neopullulanase 1
Authors:Tonozuka, T.
Deposit date:2017-12-21
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Mutagenesis-induced conformational change in domain B of a pullulan-hydrolyzing alpha-amylase TVA I
Amylase, 2, 2018
5ZCE
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BU of 5zce by Molmil
Crystal structure of Alpha-glucosidase in complex with maltotetraose
Descriptor: Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kato, K, Saburi, W, Yao, M.
Deposit date:2018-02-16
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.555 Å)
Cite:Function and structure of GH13_31 alpha-glucosidase with high alpha-(1→4)-glucosidic linkage specificity and transglucosylation activity.
FEBS Lett., 592, 2018
5Z0T
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BU of 5z0t by Molmil
Thermoactinomyces vulgaris R-47 alpha-amylase I (TVA I) mutant A357V/Q359N/Y360E (AQY/VNE)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Neopullulanase 1
Authors:Tonozuka, T.
Deposit date:2017-12-21
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mutagenesis-induced conformational change in domain B of a pullulan-hydrolyzing alpha-amylase TVA I
Amylase, 2, 2018
5ZCD
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BU of 5zcd by Molmil
Crystal structure of Alpha-glucosidase in complex with maltotriose
Descriptor: Alpha-glucosidase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Kato, K, Saburi, W, Yao, M.
Deposit date:2018-02-16
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.707 Å)
Cite:Function and structure of GH13_31 alpha-glucosidase with high alpha-(1→4)-glucosidic linkage specificity and transglucosylation activity.
FEBS Lett., 592, 2018
6AAV
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BU of 6aav by Molmil
Crystal structure of alpha-glucosyl transfer enzyme, XgtA at 1.72 angstrom resolution
Descriptor: Alpha-glucosyltransferase
Authors:Kurumizaka, H, Arimura, Y, Kirimura, K, Watanabe, R.
Deposit date:2018-07-19
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of alpha-glucosyl transfer enzyme XgtA from Xanthomonas campestris WU-9701.
Biochem.Biophys.Res.Commun., 526, 2020
6AG0
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BU of 6ag0 by Molmil
The X-ray Crystallographic Structure of Maltooligosaccharide-forming Amylase from Bacillus stearothermophilus STB04
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Alpha-amylase, CALCIUM ION
Authors:Li, Z.F, Li, Y.L, Ban, X.F, Zhang, C.Y, Jin, T.C, Xie, X.F, Gu, Z.B, Li, C.M.
Deposit date:2018-08-09
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a maltooligosaccharide-forming amylase from Bacillus stearothermophilus STB04.
Int.J.Biol.Macromol., 138, 2019
5BRQ
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BU of 5brq by Molmil
Crystal structure of Bacillus licheniformis trehalose-6-phosphate hydrolase (TreA)
Descriptor: Glycoside Hydrolase Family 13, MAGNESIUM ION
Authors:Hsiao, C.-D, Lin, M.-G.
Deposit date:2015-06-01
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:Bacillus licheniformis trehalose-6-phosphate hydrolase structures suggest keys to substrate specificity
Acta Crystallogr D Struct Biol, 72, 2016
6L2H
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BU of 6l2h by Molmil
CGTase mutant-Y167H
Descriptor: Alpha-cyclodextrin glucanotransferase, CALCIUM ION
Authors:Fan, T.W, Hou, A.Q, Chao, Y.P, Sun, Y.
Deposit date:2019-10-03
Release date:2019-10-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.096 Å)
Cite:Structure basis of a mutant a-CGTase tyrosine167histidine from Bacillus sp. 602-1 with enhanced a-CD production
To Be Published
5BRP
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BU of 5brp by Molmil
Crystal structure of Bacillus licheniformis trehalose-6-phosphate hydrolase (TreA), mutant R201Q, in complex with PNG
Descriptor: 4-nitrophenyl alpha-D-glucopyranoside, Glycoside Hydrolase Family 13, MAGNESIUM ION
Authors:Hsiao, C.-D, Lin, M.-G.
Deposit date:2015-06-01
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Bacillus licheniformis trehalose-6-phosphate hydrolase structures suggest keys to substrate specificity
Acta Crystallogr D Struct Biol, 72, 2016
5CLW
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BU of 5clw by Molmil
Crystal structure of human glycogen branching enzyme (GBE1) in complex with maltoheptaose
Descriptor: 1,4-alpha-glucan-branching enzyme, SODIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Krojer, T, Froese, D.S, Goubin, S, Strain-Damerell, C, Mahajan, P, Burgess-Brown, N, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Yue, W, Structural Genomics Consortium (SGC)
Deposit date:2015-07-16
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of human glycogen branching enzyme (GBE1) in complex with maltoheptaose
To be published
6LID
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BU of 6lid by Molmil
Heteromeric amino acid transporter b0,+AT-rBAT complex
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yan, R.H, Li, Y.N, Lei, J.L, Zhou, Q.
Deposit date:2019-12-10
Release date:2020-04-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structure of the human heteromeric amino acid transporter b0,+AT-rBAT.
Sci Adv, 6, 2020
3EDF
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BU of 3edf by Molmil
Structural base for cyclodextrin hydrolysis
Descriptor: CALCIUM ION, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), Cyclomaltodextrinase, ...
Authors:Buedenbender, S, Schulz, G.E.
Deposit date:2008-09-03
Release date:2009-03-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
6LI9
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BU of 6li9 by Molmil
Heteromeric amino acid transporter b0,+AT-rBAT complex bound with Arginine
Descriptor: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ARGININE, ...
Authors:Yan, R.H, Li, Y.N, Lei, J.L, Zhou, Q.
Deposit date:2019-12-10
Release date:2020-04-29
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Cryo-EM structure of the human heteromeric amino acid transporter b0,+AT-rBAT.
Sci Adv, 6, 2020
5GTW
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BU of 5gtw by Molmil
The N253R mutant structures of trehalose synthase from Deinococcus radiodurans display two different active-site conformations
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MAGNESIUM ION, ...
Authors:Chow, S.Y, Wei, Y.J, Liaw, S.H.
Deposit date:2016-08-23
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:The N253R mutant structures of trehalose synthase from Deinococcus radiodurans display two different active-site conformations
To Be Published
3EDJ
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BU of 3edj by Molmil
Structural base for cyclodextrin hydrolysis
Descriptor: CALCIUM ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Cyclomaltodextrinase, ...
Authors:Buedenbender, S, Schulz, G.E.
Deposit date:2008-09-03
Release date:2009-03-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
5GQU
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BU of 5gqu by Molmil
Crystal structure of branching enzyme from Cyanothece sp. ATCC 51142
Descriptor: 1,4-alpha-glucan branching enzyme GlgB, GLYCEROL, MAGNESIUM ION
Authors:Suzuki, R, Suzuki, E.
Deposit date:2016-08-08
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Bound Substrate in the Structure of Cyanobacterial Branching Enzyme Supports a New Mechanistic Model
J. Biol. Chem., 292, 2017

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