1I74
| STREPTOCOCCUS MUTANS INORGANIC PYROPHOSPHATASE | Descriptor: | MAGNESIUM ION, MANGANESE (II) ION, PROBABLE MANGANESE-DEPENDENT INORGANIC PYROPHOSPHATASE, ... | Authors: | Merckel, M.C, Fabrichniy, I.P, Goldman, A, Lahti, R, Salminen, A. | Deposit date: | 2001-03-07 | Release date: | 2001-06-06 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure of Streptococcus mutans pyrophosphatase: a new fold for an old mechanism. Structure, 9, 2001
|
|
1K23
| Inorganic Pyrophosphatase (Family II) from Bacillus subtilis | Descriptor: | MANGANESE (II) ION, Manganese-dependent inorganic pyrophosphatase | Authors: | Ahn, S, Milner, A.J, Futterer, K, Konopka, M, Ilias, M, Young, T.W, White, S.A. | Deposit date: | 2001-09-26 | Release date: | 2001-10-31 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | The "open" and "closed" structures of the type-C inorganic pyrophosphatases from Bacillus subtilis and Streptococcus gordonii. J.Mol.Biol., 313, 2001
|
|
1K20
| Inorganic Pyrophosphatase (family II) from Streptococcus gordonii at 1.5 A resolution | Descriptor: | GLYCEROL, MANGANESE (II) ION, Manganese-dependent inorganic pyrophosphatase, ... | Authors: | Ahn, S, Milner, A.J, Futterer, K, Konopka, M, Ilias, M, Young, T.W, White, S.A. | Deposit date: | 2001-09-26 | Release date: | 2001-10-31 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | The "open" and "closed" structures of the type-C inorganic pyrophosphatases from Bacillus subtilis and Streptococcus gordonii. J.Mol.Biol., 313, 2001
|
|
1IR6
| Crystal structure of exonuclease RecJ bound to manganese | Descriptor: | MANGANESE (II) ION, exonuclease RecJ | Authors: | Yamagata, A, Kakuta, Y, Masui, R, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2001-09-11 | Release date: | 2002-05-15 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity. Proc.Natl.Acad.Sci.USA, 99, 2002
|
|
1WPP
| Structure of Streptococcus gordonii inorganic pyrophosphatase | Descriptor: | CHLORIDE ION, Probable manganese-dependent inorganic pyrophosphatase, SULFATE ION, ... | Authors: | Fabrichniy, I.P, Lehtio, L, Salminen, A, Baykov, A.A, Lahti, R, Goldman, A. | Deposit date: | 2004-09-09 | Release date: | 2004-11-23 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structural Studies of Metal Ions in Family II Pyrophosphatases: The Requirement for a Janus Ion Biochemistry, 43, 2004
|
|
1WPN
| Crystal structure of the N-terminal core of Bacillus subtilis inorganic pyrophosphatase | Descriptor: | MANGANESE (II) ION, Manganese-dependent inorganic pyrophosphatase, SULFATE ION | Authors: | Fabrichniy, I.P, Lehtio, L, Salminen, A, Baykov, A.A, Lahti, R, Goldman, A. | Deposit date: | 2004-09-09 | Release date: | 2004-11-23 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Structural Studies of Metal Ions in Family II Pyrophosphatases: The Requirement for a Janus Ion Biochemistry, 43, 2004
|
|
1WPM
| Structure of Bacillus subtilis inorganic pyrophosphatase | Descriptor: | Manganese-dependent inorganic pyrophosphatase, SULFATE ION, TETRAETHYLENE GLYCOL | Authors: | Fabrichniy, I.P, Lehtio, L, Salminen, A, Baykov, A.A, Lahti, R, Goldman, A. | Deposit date: | 2004-09-09 | Release date: | 2004-11-23 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structural Studies of Metal Ions in Family II Pyrophosphatases: The Requirement for a Janus Ion Biochemistry, 43, 2004
|
|
2IW4
| CRYSTAL STRUCTURE OF BASILLUS SUBTILIS FAMILY II INORGANIC PYROPHOSPHATASE MUTANT, H98Q, IN COMPLEX WITH PNP | Descriptor: | FE (III) ION, GLYCEROL, IMIDODIPHOSPHORIC ACID, ... | Authors: | Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A. | Deposit date: | 2006-06-26 | Release date: | 2006-11-07 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | A Trimetal Site and Substrate Distortion in a Family II Inorganic Pyrophosphatase. J.Biol.Chem., 282, 2007
|
|
2HAW
| Crystal structure of family II Inorganic pyrophosphatase in complex with PNP | Descriptor: | CHLORIDE ION, FLUORIDE ION, GLYCEROL, ... | Authors: | Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A. | Deposit date: | 2006-06-13 | Release date: | 2006-11-14 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | A trimetal site and substrate distortion in a family II inorganic pyrophosphatase J.Biol.Chem., 282, 2007
|
|
2ENX
| Structure of the family II inorganic pyrophosphatase from Streptococcus agalactiae at 2.8 resolution | Descriptor: | IMIDODIPHOSPHORIC ACID, MAGNESIUM ION, MANGANESE (II) ION, ... | Authors: | Rantanen, M.K, Lehtio, L, Rajagopal, L, Rubens, C.E, Goldman, A. | Deposit date: | 2007-03-28 | Release date: | 2007-05-29 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Structure of the Streptococcus agalactiae family II inorganic pyrophosphatase at 2.80 A resolution ACTA CRYSTALLOGR.,SECT.D, 63, 2007
|
|
2EB0
| |
2QB7
| Saccharomyces cerevisiae cytosolic exopolyphosphatase, phosphate complex | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, COBALT (II) ION, ... | Authors: | White, S.A, Ugochukwu, E. | Deposit date: | 2007-06-16 | Release date: | 2007-12-11 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity. J.Mol.Biol., 371, 2007
|
|
2QB8
| |
2QB6
| Saccharomyces cerevisiae cytosolic exopolyphosphatase, sulfate complex | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, Exopolyphosphatase, ... | Authors: | White, S.A, Ugochukwu, E. | Deposit date: | 2007-06-16 | Release date: | 2007-12-11 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The crystal structure of the cytosolic exopolyphosphatase from Saccharomyces cerevisiae reveals the basis for substrate specificity. J.Mol.Biol., 371, 2007
|
|
3DEV
| Crystal structure of SH1221 protein from Staphylococcus haemolyticus, Northeast Structural Genomics Consortium Target ShR87 | Descriptor: | MAGNESIUM ION, SH1221, SULFATE ION | Authors: | Forouhar, F, Neely, H, Seetharaman, J, Mao, L, Xiao, R, Ciccosanti, C, Foote, E.L, Wang, D, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2008-06-10 | Release date: | 2008-08-05 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (3.1 Å) | Cite: | Crystal structure of SH1221 protein from Staphylococcus haemolyticus, Northeast Structural Genomics Consortium Target ShR87 To be Published
|
|
2ZXO
| Crystal structure of RecJ from Thermus thermophilus HB8 | Descriptor: | Single-stranded DNA specific exonuclease RecJ | Authors: | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | Deposit date: | 2009-01-05 | Release date: | 2010-01-05 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structure of RecJ exonuclease defines its specificity for single-stranded DNA J.Biol.Chem., 285, 2010
|
|
2ZXP
| Crystal structure of RecJ in complex with Mn2+ from Thermus thermophilus HB8 | Descriptor: | MANGANESE (II) ION, Single-stranded DNA specific exonuclease RecJ | Authors: | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | Deposit date: | 2009-01-05 | Release date: | 2010-01-05 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Structure of RecJ exonuclease defines its specificity for single-stranded DNA J.Biol.Chem., 285, 2010
|
|
2ZXR
| Crystal structure of RecJ in complex with Mg2+ from Thermus thermophilus HB8 | Descriptor: | MAGNESIUM ION, Single-stranded DNA specific exonuclease RecJ | Authors: | Wakamatsu, T, Kitamura, Y, Nakagawa, N, Masui, R, Kuramitsu, S. | Deposit date: | 2009-01-05 | Release date: | 2010-01-05 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Structure of RecJ exonuclease defines its specificity for single-stranded DNA J.Biol.Chem., 285, 2010
|
|
3L2B
| Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with activator, diadenosine tetraphosphate | Descriptor: | BIS(ADENOSINE)-5'-TETRAPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase | Authors: | Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R. | Deposit date: | 2009-12-15 | Release date: | 2010-04-21 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.27 Å) | Cite: | Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate. J.Mol.Biol., 2010
|
|
3L31
| Crystal structure of the CBS and DRTGG domains of the regulatory region of Clostridium perfringens pyrophosphatase complexed with the inhibitor, AMP | Descriptor: | ADENOSINE MONOPHOSPHATE, Probable manganase-dependent inorganic pyrophosphatase | Authors: | Tuominen, H, Salminen, A, Oksanen, E, Jamsen, J, Heikkila, O, Lehtio, L, Magretova, N.N, Goldman, A, Baykov, A.A, Lahti, R. | Deposit date: | 2009-12-16 | Release date: | 2010-04-21 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal Structures of the CBS and DRTGG Domains of the Regulatory Region of Clostridiumperfringens Pyrophosphatase Complexed with the Inhibitor, AMP, and Activator, Diadenosine Tetraphosphate. J.Mol.Biol., 2010
|
|
3W5W
| Mn2+-GMP complex of nanoRNase (Nrn) from Bacteroides fragilis | Descriptor: | GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, Putative exopolyphosphatase-related protein | Authors: | Uemura, Y, Nakagawa, N, Wakamatsu, T, Montelione, G.T, Hunt, J.F, Masui, R, Kuramitsu, S. | Deposit date: | 2013-02-07 | Release date: | 2013-07-10 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.95 Å) | Cite: | Crystal structure of the ligand-binding form of nanoRNase from Bacteroides fragilis, a member of the DHH/DHHA1 phosphoesterase family of proteins. Febs Lett., 587, 2013
|
|
4PY9
| Crystal structure of an exopolyphosphatase-related protein from Bacteroides Fragilis. Northeast Structural Genomics target BFR192 | Descriptor: | PHOSPHATE ION, Putative exopolyphosphatase-related protein, SODIUM ION | Authors: | Seetharaman, J, Abashidze, M, Wang, H, Janjua, H, Foote, E.L, Xiao, R, Nair, R, Everett, J.K, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) | Deposit date: | 2014-03-26 | Release date: | 2014-06-25 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | Crystal structure of an exopolyphosphatase-related protein from Bacteroides Fragilis. Northeast Structural Genomics target BFR192 To be Published
|
|
4LS9
| Structure of mycobacterial nrnA homolog reveals multifunctional nuclease activities | Descriptor: | DHH family protein, GLYCEROL, MANGANESE (II) ION | Authors: | Kumar, D, Srivastav, R, Grover, A, Manjasetty, B.A, Sharma, R, Taneja, B. | Deposit date: | 2013-07-22 | Release date: | 2014-07-16 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Unique subunit packing in mycobacterial nanoRNase leads to alternate substrate recognitions in DHH phosphodiesterases Nucleic Acids Res., 42, 2014
|
|
4RPA
| |
5CET
| Crystal structure of Rv2837c | Descriptor: | Bifunctional oligoribonuclease and PAP phosphatase NrnA, MANGANESE (II) ION | Authors: | Wang, F, He, Q, Zhu, D, Liu, S, Gu, L. | Deposit date: | 2015-07-07 | Release date: | 2015-12-23 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural and Biochemical Insight into the Mechanism of Rv2837c from Mycobacterium tuberculosis as a c-di-NMP Phosphodiesterase J.Biol.Chem., 291, 2016
|
|