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9YFB
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BU of 9yfb by Molmil
Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with UTP
Descriptor: MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE, UTP--glucose-1-phosphate uridylyltransferase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-09-25
Release date:2025-10-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with UTP
To be published
9YH9
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BU of 9yh9 by Molmil
Crystal structure of a phage catechol 1,2-deoxygenase identified from a soil metagenomic survey.
Descriptor: Catechol 1,2-deoxygenase, FE (III) ION
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-09-30
Release date:2025-10-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of a phage catechol 1,2-deoxygenase identified from a soil metagenomic survey.
To be published
4TZ5
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BU of 4tz5 by Molmil
Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E in complex with laminarihexaose
Descriptor: 1,2-ETHANEDIOL, Putative secreted protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose, ...
Authors:Bianchetti, C.M, Takasuka, T.E, Yik, E.J, Bergeman, L.F, Fox, B.G.
Deposit date:2014-07-09
Release date:2015-03-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Active site and laminarin binding in glycoside hydrolase family 55.
J.Biol.Chem., 290, 2015
6J50
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BU of 6j50 by Molmil
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome (tilted conformation)
Descriptor: DNA (198-MER), DNA (41-MER), DNA-directed RNA polymerase subunit, ...
Authors:Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
Deposit date:2019-01-10
Release date:2019-02-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
4UO0
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BU of 4uo0 by Molmil
Structure of the A_Equine_Richmond_07 H3 haemagglutinin
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Vachieri, S.G, Collins, P.J, Haire, L.F, Ogrodowicz, R.W, Martin, S.R, Walker, P.A, Xiong, X, Gamblin, S.J, Skehel, J.J.
Deposit date:2014-05-31
Release date:2014-07-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recent Evolution of Equine Influenza and the Origin of Canine Influenza.
Proc.Natl.Acad.Sci.USA, 111, 2014
6J4Z
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BU of 6j4z by Molmil
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome
Descriptor: DNA (198-MER), DNA (42-MER), DNA-directed RNA polymerase subunit, ...
Authors:Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
Deposit date:2019-01-10
Release date:2019-02-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
6J51
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BU of 6j51 by Molmil
RNA polymerase II elongation complex bound with Spt4/5 and foreign DNA, stalled at SHL(-1) of the nucleosome, weak Elf1 (+1 position)
Descriptor: DNA (198-MER), DNA (36-MER), DNA-directed RNA polymerase subunit, ...
Authors:Ehara, H, Kujirai, T, Fujino, Y, Shirouzu, M, Kurumizaka, H, Sekine, S.
Deposit date:2019-01-10
Release date:2019-02-20
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Science, 363, 2019
6JP8
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BU of 6jp8 by Molmil
Rabbit Cav1.1-Bay K8644 Complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zhao, Y, Huang, G, Wu, J, Yan, N.
Deposit date:2019-03-26
Release date:2019-06-12
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Molecular Basis for Ligand Modulation of a Mammalian Voltage-Gated Ca2+Channel.
Cell, 177, 2019
8XC7
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BU of 8xc7 by Molmil
Structure of LL-D49194-alpha-1 covalently bound to guanosine-2'-fluorinated d(AACCGGTT)2
Descriptor: DNA (5'-D(*AP*AP*CP*CP*2''F-GP*2''F-GP*TP*T)-3'), LL-D49194alpha1
Authors:Gao, R.Q, Tang, G.L, Cao, C.
Deposit date:2023-12-08
Release date:2024-12-04
Last modified:2024-12-11
Method:SOLUTION NMR
Cite:Different DNA Binding and Damage Mode between Anticancer Antibiotics Trioxacarcin A and LL-D49194 alpha 1.
Jacs Au, 4, 2024
9YFK
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BU of 9yfk by Molmil
Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with URIDINE-5'-DIPHOSPHATE-GLUCOSE (twinned lattice)
Descriptor: MAGNESIUM ION, URIDINE-5'-DIPHOSPHATE-GLUCOSE, UTP--glucose-1-phosphate uridylyltransferase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-09-26
Release date:2025-10-08
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with URIDINE-5'-DIPHOSPHATE-GLUCOSE (twinned lattice)
To be published
9V14
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BU of 9v14 by Molmil
crystal structure of the enzyme-product complex of L-azetidine-2-carboxylate hydrolase
Descriptor: 1,2-ETHANEDIOL, 4-AMINO-2-HYDROXYBUTANOIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Toyoda, M, Mizutani, K, Mikami, B, Wackett, L.P, Esaki, N, Kurihara, T.
Deposit date:2025-05-19
Release date:2025-06-04
Method:X-RAY DIFFRACTION (0.93 Å)
Cite:Research for the crystal structure of L-azetidine-2-carboxylate hydrolase
To Be Published
9O0X
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BU of 9o0x by Molmil
Co-crystal structure of human TREX1 in complex with an inhibitor
Descriptor: 1,2-ETHANEDIOL, 5-({N-[(2,3-dichlorophenyl)methyl]-3,5-difluorobenzamido}methyl)-3-(methylamino)pyridine-2-carboxylic acid, MAGNESIUM ION, ...
Authors:Dehghani-Tafti, S, Dong, A, Li, Y, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2025-04-03
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
9O0W
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BU of 9o0w by Molmil
Co-crystal structure of human TREX1 in complex with an inhibitor
Descriptor: 1,2-ETHANEDIOL, 5-({N-[(2,3-dichlorophenyl)methyl]-3,5-difluorobenzamido}methyl)pyridine-2-carboxylic acid, MAGNESIUM ION, ...
Authors:Dehghani-Tafti, S, Dong, A, Li, Y, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2025-04-03
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Co-crystal structure of human TREX1 in complex with an inhibitor
To be published
9VGE
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BU of 9vge by Molmil
SIRT2 demyristoylation intermediate I structure
Descriptor: GLYCEROL, Histone H3.1, NAD-dependent protein deacetylase sirtuin-2, ...
Authors:Zhang, N, Hao, Q.
Deposit date:2025-06-13
Release date:2025-09-24
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Structural basis of SIRT2 pre-catalysis NAD + binding dynamics and mechanism.
Rsc Chem Biol, 2025
6W5G
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BU of 6w5g by Molmil
Class D beta-lactamase BAT-2
Descriptor: 1,2-ETHANEDIOL, BAT-2 beta-lactamase
Authors:Smith, C.A, Vakulenko, S.B, Stewart, N.K, Toth, M.
Deposit date:2020-03-13
Release date:2020-06-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:A surface loop modulates activity of the Bacillus class D beta-lactamases.
J.Struct.Biol., 211, 2020
9Y81
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BU of 9y81 by Molmil
Crystal structure of Glutamate-tRNA synthetase GluRS from Chlamydia pneumoniae
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glutamate--tRNA ligase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2025-09-11
Release date:2025-09-24
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Crystal structure of Glutamate-tRNA synthetase GluRS from Chlamydia pneumoniae
To be published
9UI2
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BU of 9ui2 by Molmil
Crystal structure of Thermus thermophilus HB8 transaldolase
Descriptor: 1,2-ETHANEDIOL, Probable transaldolase, SULFATE ION
Authors:Kamitori, S.
Deposit date:2025-04-15
Release date:2025-07-30
Last modified:2025-08-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthetic Study of 8- and 9-Carbon Sugars by Transaldolase.
J.Agric.Food Chem., 73, 2025
9E61
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BU of 9e61 by Molmil
Cryo-EM structure of Saccharomyces cerevisiae Pmt4 apo form
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Dolichyl-phosphate-mannose--protein mannosyltransferase 4
Authors:Du, M, Yuan, Z, Li, H.
Deposit date:2024-10-29
Release date:2025-10-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Pmt4 recognizes two separate acceptor sites to O-mannosylate the S/T-rich regions of substrate proteins
To Be Published
9E6V
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BU of 9e6v by Molmil
Cryo-EM structure of Saccharomyces cerevisiae Pmt4-Ccw5 complex
Descriptor: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cell wall mannoprotein CIS3, Dolichyl-phosphate-mannose--protein mannosyltransferase 4, ...
Authors:Du, M, Yuan, Z, Li, H.
Deposit date:2024-10-31
Release date:2025-10-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Pmt4 recognizes two separate acceptor sites to O-mannosylate the S/T-rich regions of substrate proteins
To Be Published
115D
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BU of 115d by Molmil
ORDERED WATER STRUCTURE IN AN A-DNA OCTAMER AT 1.7 ANGSTROMS RESOLUTION
Descriptor: DNA (5'-D(*GP*GP*(BRU)P*AP*(BRU)P*AP*CP*C)-3')
Authors:Kennard, O, Cruse, W.B.T, Nachman, J, Prange, T, Shakked, Z, Rabinovich, D.
Deposit date:1993-02-12
Release date:1993-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ordered water structure in an A-DNA octamer at 1.7 A resolution.
J.Biomol.Struct.Dyn., 3, 1986
9VCK
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BU of 9vck by Molmil
Cryo-EM structure of SARS-CoV-2 nsp10/nsp14:RNA:SMP complex
Descriptor: CALCIUM ION, Guanine-N7 methyltransferase nsp14, Non-structural protein 10, ...
Authors:Wang, J, Lou, Z, Liu, D.
Deposit date:2025-06-06
Release date:2025-07-16
Method:ELECTRON MICROSCOPY (4.22 Å)
Cite:Structural Basis and Rational Design of Nucleotide Analogue Inhibitor Evading the SARS-CoV-2 Proofreading Enzyme.
J.Am.Chem.Soc., 147, 2025
9VCL
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BU of 9vcl by Molmil
Cryo-EM structure of SARS-CoV-2 nsp10/nsp14:RNA:ATMP complex
Descriptor: CALCIUM ION, Guanine-N7 methyltransferase nsp14, Non-structural protein 10, ...
Authors:Wang, J, Lou, Z, Liu, D.
Deposit date:2025-06-06
Release date:2025-07-16
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Structural Basis and Rational Design of Nucleotide Analogue Inhibitor Evading the SARS-CoV-2 Proofreading Enzyme.
J.Am.Chem.Soc., 147, 2025
9QYT
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BU of 9qyt by Molmil
Crystal structure of leaf branch compost cutinase variant ICCG L50Y T110E
Descriptor: 1,2-ETHANEDIOL, Leaf-branch compost cutinase, SODIUM ION
Authors:Bischoff, D, Walla, B, Janowski, R, Niessing, D, Weuster-Botz, D.
Deposit date:2025-04-20
Release date:2025-07-02
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Application of a Rational Crystal Contact Engineering Strategy on a Poly(ethylene terephthalate)-Degrading Cutinase.
Bioengineering (Basel), 12, 2025
9RYG
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BU of 9ryg by Molmil
Bifunctional Non-haem Iron Oxygenase NovR Involved in Novobiocin Biosynthesis with product bound
Descriptor: 1,2-ETHANEDIOL, 3-(3-methylbut-2-enyl)-4-oxidanyl-benzoic acid, Decarboxylase NovR, ...
Authors:Keller, S, Lawson, D.M.
Deposit date:2025-07-15
Release date:2025-07-23
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:Bifunctional Non-haem Iron Oxygenase NovR Involved in Novobiocin Biosynthesis with product bound
To Be Published
9QYU
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BU of 9qyu by Molmil
Crystal structure of leaf branch compost cutinase quintuple variant ICCG L50Y
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Leaf-branch compost cutinase
Authors:Bischoff, D, Walla, B, Dietrich, A.-M, Janowski, R, Niessing, D, Weuster-Botz, D.
Deposit date:2025-04-21
Release date:2025-07-02
Last modified:2025-07-09
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Application of a Rational Crystal Contact Engineering Strategy on a Poly(ethylene terephthalate)-Degrading Cutinase.
Bioengineering (Basel), 12, 2025

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