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1VBX
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BU of 1vbx by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in EDTA solution
Descriptor: Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
Authors:Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
Deposit date:2004-03-03
Release date:2004-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
2LCQ
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BU of 2lcq by Molmil
Solution structure of the endonuclease Nob1 from P.horikoshii
Descriptor: Putative toxin VapC6, ZINC ION
Authors:Veith, T, Martin, R, Wurm, J.P, Weis, B, Duchardt-Ferner, E, Safferthal, C, Hennig, R, Mirus, O, Bohnsack, M.T, Woehnert, J, Schleiff, E.
Deposit date:2011-05-05
Release date:2011-12-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional analysis of the archaeal endonuclease Nob1.
Nucleic Acids Res., 40, 2012
1IG9
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BU of 1ig9 by Molmil
Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase
Descriptor: 5'-D(*AP*CP*AP*GP*GP*TP*AP*AP*GP*CP*AP*GP*TP*CP*CP*GP*CP*G)-3', 5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*CP*(DOC))-3', CALCIUM ION, ...
Authors:Franklin, M.C, Wang, J, Steitz, T.A.
Deposit date:2001-04-17
Release date:2001-06-11
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the Replicating Complex of a Pol Alpha Family DNA Polymerase
Cell(Cambridge,Mass.), 105, 2001
7JM3
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BU of 7jm3 by Molmil
Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer
Descriptor: Matrix protein 1
Authors:Su, Z, Pintilie, G, Selzer, L, Chiu, W, Kirkegaard, K.
Deposit date:2020-07-30
Release date:2020-08-12
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Full-length three-dimensional structure of the influenza A virus M1 protein and its organization into a matrix layer.
Plos Biol., 18, 2020
2VJV
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BU of 2vjv by Molmil
Crystal structure of the IS608 transposase in complex with left end 26-mer DNA hairpin and a 6-mer DNA representing the left end cleavage site
Descriptor: 5'-D(*DA*DA*DA*DG*DC*DC*DC*DC*DT*DA*DG*DC*DTP*DT *DT*DT*DA*DG*DC*DT*DA*DT*DG*DG*DG*DGP)-3', 5'-D(*DT*DA*DT*DT*DA*DCP)-3', MAGNESIUM ION, ...
Authors:Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F.
Deposit date:2007-12-13
Release date:2008-02-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Cell(Cambridge,Mass.), 132, 2008
4N1M
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BU of 4n1m by Molmil
Structure of Cyclophilin A in complex with GlyPro.
Descriptor: GLYCINE, PROLINE, Peptidyl-prolyl cis-trans isomerase A
Authors:Mcnae, I.W, Patterson, A, Walkinshaw, M.D.
Deposit date:2013-10-04
Release date:2015-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Mapping the binding surface of Cyclophilin A.
To be Published
1VBZ
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BU of 1vbz by Molmil
Crystal Structure of the Hepatitis Delta Virus Gemonic Ribozyme Precursor, with C75U mutaion, in Ba2+ solution
Descriptor: BARIUM ION, Hepatitis Delta virus ribozyme, U1 small nuclear ribonucleoprotein A
Authors:Ke, A, Zhou, K, Ding, F, Cate, J.H.D, Doudna, J.A.
Deposit date:2004-03-03
Release date:2004-05-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Conformational Switch controls hepatitis delta virus ribozyme catalysis
NATURE, 429, 2004
7YZN
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BU of 7yzn by Molmil
Structure of C-terminally truncated aIF5B from Pyrococcus abyssi complexed with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Probable translation initiation factor IF-2, ...
Authors:Bourgeois, G, Schmitt, E, Mechulam, Y, Coureux, P.D, Kazan, R.
Deposit date:2022-02-21
Release date:2022-06-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
7YYP
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BU of 7yyp by Molmil
Structure of aIF5B from Pyrococcus abyssi complexed with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, NITRATE ION, Probable translation initiation factor IF-2
Authors:Bourgeois, G, Schmitt, E, Mechulam, Y, Coureux, P.D, Kazan, R.
Deposit date:2022-02-18
Release date:2022-06-29
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Role of aIF5B in archaeal translation initiation.
Nucleic Acids Res., 50, 2022
3DCB
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BU of 3dcb by Molmil
Crystal structure of the Drosophila kinesin family member NOD in complex with AMPPNP
Descriptor: Kinesin-like protein Nod, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Cochran, J.C, Mulko, N.K, Kull, F.J.
Deposit date:2008-06-03
Release date:2009-02-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:ATPase cycle of the nonmotile kinesin NOD allows microtubule end tracking and drives chromosome movement.
Cell(Cambridge,Mass.), 136, 2009
1MGR
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BU of 1mgr by Molmil
Crystal structure of RNase Sa3,cytotoxic microbial ribonuclease
Descriptor: Guanyl-specific ribonuclease Sa3, SULFATE ION
Authors:Sevcik, J, Urbanikova, L, Leland, P.A, Raines, R.T.
Deposit date:2002-08-16
Release date:2003-02-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Links X-ray Structure of Two Crystalline Forms of a Streptomycete Ribonuclease with Cytotoxic Activity
J.Biol.Chem., 277, 2002
1MGW
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BU of 1mgw by Molmil
Crystal structure of RNase Sa3, cytotoxic microbial ribonuclease
Descriptor: Guanyl-specific ribonuclease Sa3, LITHIUM ION
Authors:Sevcik, J, Urbanikova, L, Leland, P.A, Raines, R.T.
Deposit date:2002-08-16
Release date:2003-02-04
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Links X-ray Structure of Two Crystalline Forms of a Streptomycete Ribonuclease with Cytotoxic Activity
J.Biol.Chem., 277, 2002
2H9U
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BU of 2h9u by Molmil
Crystal structure of the archaea specific DNA binding protein
Descriptor: 1,2-ETHANEDIOL, DNA/RNA-binding protein Alba 2
Authors:Kumarevel, T.S, Sakamoto, K, Shinkai, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-06-12
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the archaea specific DNA binding protein from Aeropyrum pernix K1
To be Published
2QG6
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BU of 2qg6 by Molmil
Crystal structure of human nicotinamide riboside kinase (NRK1) in complex with nicotinamide mononucleotide (NMN)
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, Nicotinamide riboside kinase 1, PHOSPHATE ION
Authors:Khan, J.A, Xiang, S, Tong, L.
Deposit date:2007-06-28
Release date:2007-10-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of human nicotinamide riboside kinase
Structure, 15, 2007
1SH3
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BU of 1sh3 by Molmil
Crystal Structure of Norwalk Virus Polymerase (MgSO4 crystal form)
Descriptor: MAGNESIUM ION, RNA Polymerase
Authors:Ng, K.K, Pendas-Franco, N, Rojo, J, Boga, J.A, Machin, A, Alonso, J.M, Parra, F.
Deposit date:2004-02-24
Release date:2004-03-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal structure of norwalk virus polymerase reveals the carboxyl terminus in the active site cleft.
J.Biol.Chem., 279, 2004
4LDM
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BU of 4ldm by Molmil
Crystal Structure of an RNA-free VP40 Octameric Ring
Descriptor: Matrix protein VP40
Authors:Bornholdt, Z.A, Ableson, D.M, Saphire, E.O.
Deposit date:2013-06-24
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Rearrangement of Ebola Virus VP40 Begets Multiple Functions in the Virus Life Cycle.
Cell(Cambridge,Mass.), 154, 2013
3FBN
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BU of 3fbn by Molmil
Structure of the Mediator submodule Med7N/31
Descriptor: Mediator of RNA polymerase II transcription subunit 31, Mediator of RNA polymerase II transcription subunit 7
Authors:Koschubs, T, Seizl, M, Lariviere, L, Kurth, F, Baumli, S, Martin, D.E, Cramer, P.
Deposit date:2008-11-19
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.007 Å)
Cite:Identification, structure, and functional requirement of the Mediator submodule Med7N/31
Embo J., 28, 2009
8H26
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BU of 8h26 by Molmil
Crystal structure of MnmM from S. aureus complexed with SAH (1.50 A)
Descriptor: 16S rRNA (Cytosine(1402)-N(4))-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Kim, J, Cho, G, Lee, J.
Deposit date:2022-10-05
Release date:2023-01-18
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of MnmM from S. aureus complexed with SAH (1.50 A)
To Be Published
3DWO
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BU of 3dwo by Molmil
Crystal structure of a Pseudomonas aeruginosa FadL homologue
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable outer membrane protein, SULFATE ION
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2008-07-22
Release date:2008-12-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall.
Nature, 458, 2009
4DAI
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BU of 4dai by Molmil
Crystal structure of B. anthracis DHPS with compound 23
Descriptor: (7-amino-4,5-dioxo-1,4,5,6-tetrahydropyrimido[4,5-c]pyridazin-3-yl)acetic acid, Dihydropteroate Synthase, SULFATE ION
Authors:Hammoudeh, D, Lee, R.E, White, S.W.
Deposit date:2012-01-12
Release date:2012-03-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-Based Design of Novel Pyrimido[4,5-c]pyridazine Derivatives as Dihydropteroate Synthase Inhibitors with Increased Affinity.
Chemmedchem, 7, 2012
1Z7I
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BU of 1z7i by Molmil
2'-Me-Se Derivitation of A-DNA Octamer G(UMSe)GTACAC
Descriptor: 5'-D(*GP*(UMS)P*GP*TP*AP*CP*AP*C)-3', SPERMINE
Authors:Huang, Z, Carrasco, N, Jiang, J.
Deposit date:2005-03-24
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Selenium derivatization of nucleic acids for crystallography.
Nucleic Acids Res., 35, 2007
4JTA
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BU of 4jta by Molmil
Crystal structure of Kv1.2-2.1 paddle chimera channel in complex with Charybdotoxin
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, ...
Authors:MacKinnon, R, Banerjee, A, Lee, A, Campbell, E.
Deposit date:2013-03-23
Release date:2013-06-12
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of a pore-blocking toxin in complex with a eukaryotic voltage-dependent K(+) channel.
Elife, 2, 2013
3DWN
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BU of 3dwn by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant A77E/S100R
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2008-07-22
Release date:2008-12-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall.
Nature, 458, 2009
1YKJ
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BU of 1ykj by Molmil
A45G p-hydroxybenzoate hydroxylase with p-hydroxybenzoate bound
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, P-HYDROXYBENZOIC ACID, P-hydroxybenzoate hydroxylase, ...
Authors:Cole, L.J, Gatti, D.L, Entsch, B, Ballou, D.P.
Deposit date:2005-01-18
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Removal of a methyl group causes global changes in p-hydroxybenzoate hydroxylase.
Biochemistry, 44, 2005
3GDG
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BU of 3gdg by Molmil
Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum.
Descriptor: Probable NADP-dependent mannitol dehydrogenase, SODIUM ION
Authors:Nuess, D, Goettig, P, Magler, I, Denk, U, Breitenbach, M, Schneider, P.B, Brandstetter, H, Simon-Nobbe, B.
Deposit date:2009-02-24
Release date:2010-06-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the NADP-dependent mannitol dehydrogenase from Cladosporium herbarum: Implications for oligomerisation and catalysis.
Biochimie, 92, 2010

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