PDB: 96046 resultsInfo pagesStatus searchChemie searchBIRD

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5K90	Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 in complex with isothiocyanate Descriptor: Chlorite dismutase, GLYCEROL, MAGNESIUM ION, ... Authors: Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K. Deposit date: 2016-05-31 Release date: 2017-06-21 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.28 Å) Cite: Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies. ACS Catal, 7, 2017
5T61	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, TRICLINIC FORM AT 2.55 A Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CHLORIDE ION, HYDROSULFURIC ACID, ... Authors: Wagner, T, Ermler, U, Shima, S. Deposit date: 2016-09-01 Release date: 2016-10-19 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.55 Å) Cite: The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science, 354, 2016
5T5I	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, ORTHORHOMBIC FORM AT 1.9 A Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, CALCIUM ION, GLYCEROL, ... Authors: Wagner, T, Ermler, U, Shima, S. Deposit date: 2016-08-31 Release date: 2016-10-19 Last modified: 2016-12-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science, 354, 2016
5E24	Structure of the Su(H)-Hairless-DNA Repressor Complex Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3'), DNA (5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3'), ... Authors: Kovall, R.A, Yuan, Z. Deposit date: 2015-09-30 Release date: 2016-06-15 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Structure and Function of the Su(H)-Hairless Repressor Complex, the Major Antagonist of Notch Signaling in Drosophila melanogaster. Plos Biol., 14, 2016
5MAU	Crystal structure of dimeric chlorite dismutase from Cyanothece sp. PCC7425 (pH 6.5) Descriptor: Chlorite dismutase, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ... Authors: Puehringer, D, Schaffner, I, Mlynek, G, Obinger, C, Djinovic-Carugo, K. Deposit date: 2016-11-04 Release date: 2017-12-20 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Molecular Mechanism of Enzymatic Chlorite Detoxification: Insights from Structural and Kinetic Studies. ACS Catal, 7, 2017
5LAA	X-RAY STRUCTURE OF THE METHYLTRANSFERASE SUBUNIT A FROM METHANOTHERMUS FERVIDUS IN COMPLEX WITH COBALAMIN Descriptor: COBALAMIN, Tetrahydromethanopterin S-methyltransferase subunit A Authors: Wagner, T, Ermler, U, Shima, S. Deposit date: 2016-06-14 Release date: 2016-07-06 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3 Å) Cite: MtrA of the sodium ion pumping methyltransferase binds cobalamin in a unique mode. Sci Rep, 6, 2016
5N2A	METHYL-COENZYME M REDUCTASE III FROM METHANOTORRIS FORMICICUS TRIGONAL FORM Descriptor: 1-THIOETHANESULFONIC ACID, BROMIDE ION, Coenzyme B, ... Authors: Wagner, T, Wegner, C.E, Ermler, U, Shima, S. Deposit date: 2017-02-07 Release date: 2017-06-14 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales. J.Bacteriol., 199, 2017
5T5M	TUNGSTEN-CONTAINING FORMYLMETHANOFURAN DEHYDROGENASE FROM METHANOTHERMOBACTER WOLFEII, TRIGONAL FORM AT 2.5 A. Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, GLYCEROL, HYDROSULFURIC ACID, ... Authors: Wagner, T, Ermler, U, Shima, S. Deposit date: 2016-08-31 Release date: 2016-10-19 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.5 Å) Cite: The methanogenic CO2 reducing-and-fixing enzyme is bifunctional and contains 46 [4Fe-4S] clusters. Science, 354, 2016
5N28	METHYL-COENZYME M REDUCTASE III FROM METHANOTORRIS FORMICICUS MONOCLINIC FORM Descriptor: 1-THIOETHANESULFONIC ACID, Coenzyme B, FACTOR 430, ... Authors: Wagner, T, Wegner, C.E, Ermler, U, Shima, S. Deposit date: 2017-02-07 Release date: 2017-06-14 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales. J.Bacteriol., 199, 2017
8AHU	Crystal structure of D-amino acid aminotrensferase from Haliscomenobacter hydrossis complexed with D-cycloserine Descriptor: Aminotransferase class IV, GLYCEROL, [5-hydroxy-6-methyl-4-({[(4E)-3-oxo-1,2-oxazolidin-4-ylidene]amino}methyl)pyridin-3-yl]methyl dihydrogen phosphate Authors: Matyuta, I.O, Boyko, K.M, Nikolaeva, A.Y, Bakunova, A.K, Popov, V.O, Bezsudnova, E.Y. Deposit date: 2022-07-22 Release date: 2022-08-31 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.41 Å) Cite: Mechanism of D-Cycloserine Inhibition of D-Amino Acid Transaminase from Haliscomenobacter hydrossis. Biochemistry Mosc., 88, 2023
8Q50	Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, tetragonal crystalline form at 1.91-A resolution Descriptor: ACETATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ... Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-07 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
8Q5T	Nitrogenase Fe protein from Methanothermococcus thermolithotrophicus, monoclinic crystalline form at 2.31-A resolution Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Nitrogenase iron protein 1 Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-09 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
8Q5V	MgADP-bound Fe protein of the molybdenum nitrogenase from Methanothermococcus thermolithotrophicus Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ... Authors: Maslac, N, Wagner, T. Deposit date: 2023-08-09 Release date: 2024-05-15 Last modified: 2024-08-14 Method: X-RAY DIFFRACTION (2.74 Å) Cite: Structural comparison of (hyper-)thermophilic nitrogenase reductases from three marine Methanococcales. Febs J., 291, 2024
7SXM	Structure of Xenon-derivatized Methyl-Coenzyme M Reductase from Methanothermobacter marburgensis Descriptor: 1-THIOETHANESULFONIC ACID, ACETATE ION, Coenzyme B, ... Authors: Chen, P.Y.-T, Drennan, C.L. Deposit date: 2021-11-23 Release date: 2022-04-06 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.503 Å) Cite: XFEL serial crystallography reveals the room temperature structure of methyl-coenzyme M reductase. J.Inorg.Biochem., 230, 2022
5MNJ	Structure of MDM2-MDMX-UbcH5B-ubiquitin complex Descriptor: E3 ubiquitin-protein ligase Mdm2, Polyubiquitin-B, Protein Mdm4, ... Authors: Klejnot, M, Huang, D.T. Deposit date: 2016-12-13 Release date: 2017-05-31 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Structural analysis of MDM2 RING separates degradation from regulation of p53 transcription activity. Nat. Struct. Mol. Biol., 24, 2017
5G0R	METHYL-COENZYME M REDUCTASE I FROM METHANOTHERMOBACTER MARBURGENSIS EXPOSED TO 3-NITROOXYPROPANOL Descriptor: CHLORIDE ION, Coenzyme B, FACTOR 430, ... Authors: Wagner, T. Deposit date: 2016-03-22 Release date: 2016-04-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Mode of Action Uncovered for the Specific Reduction of Methane Emissions from Ruminants by the Small Molecule 3-Nitrooxypropanol. Proc.Natl.Acad.Sci.USA, 113, 2016
8POC	Cryo-EM structure of Dickeya dadantii BcsD Descriptor: Cellulose synthase operon protein D Authors: Notopoulou, A, Krasteva, P.V. Deposit date: 2023-07-04 Release date: 2023-12-20 Last modified: 2024-01-24 Method: ELECTRON MICROSCOPY (4 Å) Cite: Structures and roles of BcsD and partner scaffold proteins in proteobacterial cellulose secretion. Curr.Biol., 34, 2024
8POG	Cryo-EM structure of Enterobacter sp. 638 BcsD Descriptor: BcsD of Enterobacter sp. 638 Authors: Notopoulou, A, Krasteva, P.V. Deposit date: 2023-07-04 Release date: 2023-12-20 Last modified: 2024-01-24 Method: ELECTRON MICROSCOPY (4.15 Å) Cite: Structures and roles of BcsD and partner scaffold proteins in proteobacterial cellulose secretion. Curr.Biol., 34, 2024
1FB5	LOW RESOLUTION STRUCTURE OF OVINE ORNITHINE TRANSCARBMOYLASE IN THE UNLIGANDED STATE Descriptor: NORVALINE, ORNITHINE TRANSCARBAMOYLASE Authors: Zanotti, G, Battistutta, R, Panzalorto, M, Francescato, P, Bruno, G, De Gregorio, A. Deposit date: 2000-07-14 Release date: 2003-08-26 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Functional and structural characterization of ovine ornithine transcarbamoylase. Org.Biomol.Chem., 1, 2003
1IPA	CRYSTAL STRUCTURE OF RNA 2'-O RIBOSE METHYLTRANSFERASE Descriptor: RNA 2'-O-RIBOSE METHYLTRANSFERASE Authors: Nureki, O, Shirouzu, M, Hashimoto, K, Ishitani, R, Terada, T, Tamakoshi, M, Oshima, T, Chijimatsu, M, Takio, K, Vassylyev, D.G, Shibata, T, Inoue, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2001-05-02 Release date: 2002-07-10 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.4 Å) Cite: An enzyme with a deep trefoil knot for the active-site architecture. Acta Crystallogr.,Sect.D, 58, 2002
3G2C	Mth0212 in complex with a short ssDNA (CGTA) Descriptor: 5'-D(P*CP*GP*TP*A)-3', Exodeoxyribonuclease, GLYCEROL, ... Authors: Lakomek, K, Dickmanns, A, Ficner, R. Deposit date: 2009-01-31 Release date: 2010-03-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
3G3Y	Mth0212 in complex with ssDNA in space group P32 Descriptor: 5'-D(*CP*GP*TP*AP*(UPS)P*TP*AP*CP*G)-3', Exodeoxyribonuclease, GLYCEROL, ... Authors: Lakomek, K, Dickmanns, A, Ficner, R. Deposit date: 2009-02-03 Release date: 2010-03-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
3G2D	Complex of Mth0212 and a 4 bp dsDNA with 3'-overhang Descriptor: 5'-D(*CP*CP*TP*GP*UP*GP*CP*GP*AP*T)-3', 5'-D(*CP*GP*CP*G*CP*AP*GP*GP*C)-3', Exodeoxyribonuclease, ... Authors: Lakomek, K, Dickmanns, A, Ficner, R. Deposit date: 2009-01-31 Release date: 2010-03-09 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal Structure Analysis of DNA Uridine Endonuclease Mth212 Bound to DNA J.Mol.Biol., 399, 2010
1NJ6	Crystal structure of Prolyl-tRNA Synthetase from Methanothermobacter thermautotrophicus bound to alanine sulfamoyl adenylate Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, MAGNESIUM ION, Proline-tRNA Synthetase, ... Authors: Kamtekar, S, Kennedy, W.D, Wang, J, Stathopoulos, C, Soll, D, Steitz, T.A. Deposit date: 2002-12-30 Release date: 2003-03-04 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.85 Å) Cite: The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases Proc.Natl.Acad.Sci.USA, 100, 2003
1NJ2	Crystal structure of Prolyl-tRNA Synthetase from Methanothermobacter thermautotrophicus Descriptor: MAGNESIUM ION, Proline-tRNA Synthetase, ZINC ION Authors: Kamtekar, S, Kennedy, W.D, Wang, J, Stathopoulos, C, Soll, D, Steitz, T.A. Deposit date: 2002-12-30 Release date: 2003-03-04 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.11 Å) Cite: The structural basis of cysteine aminoacylation of tRNAPro by prolyl-tRNA synthetases Proc.Natl.Acad.Sci.USA, 100, 2003

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