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6X8W
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BU of 6x8w by Molmil
Structure of ArrX Y138A mutant protein bound to sulfate from Chrysiogenes arsenatis
Descriptor: ArrX, SULFATE ION
Authors:Maher, M.J, Poddar, N.
Deposit date:2020-06-02
Release date:2021-02-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.972 Å)
Cite:Structural and Functional Investigation of the Periplasmic Arsenate-Binding Protein ArrX from Chrysiogenes arsenatis .
Biochemistry, 60, 2021
6I6N
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BU of 6i6n by Molmil
Papaver somniferum O-methyltransferase 1
Descriptor: (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol, O-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Cabry, M.P, Offen, W.A, Winzer, T, Li, Y, Graham, I.A, Davies, G.J, Saleh, P.
Deposit date:2018-11-15
Release date:2019-03-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Papaver somniferum O-Methyltransferase 1 Reveals Initiation of Noscapine Biosynthesis with Implications for Plant Natural Product Methylation
Acs Catalysis, 2019
8PKR
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BU of 8pkr by Molmil
Crystal structure of PknD-345, a repeat fragment from the M. tuberculosis PknD beta-propeller
Descriptor: GLYCEROL, non-specific serine/threonine protein kinase
Authors:Wouters, S.M.L.
Deposit date:2023-06-27
Release date:2024-07-10
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
5ENJ
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BU of 5enj by Molmil
Crystal structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in complex with compound-14 N11530 (SGC - Diamond I04-1 fragment screening)
Descriptor: MAGNESIUM ION, PH-interacting protein, ~{N}-[[2,6-bis(chloranyl)phenyl]methyl]-~{N}-methyl-ethanamide
Authors:Krojer, T, Talon, R, Collins, P, Bradley, A, Cox, O, Szykowska, A, Burgess-Brown, N, Brennan, P, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2015-11-09
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:A poised fragment library enables rapid synthetic expansion yielding the first reported inhibitors of PHIP(2), an atypical bromodomain.
Chem Sci, 7, 2016
6XZI
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BU of 6xzi by Molmil
Structure of zVDR LBD-calcitriol in complex with chimera 11
Descriptor: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, ACETATE ION, ARG-HIS-LYS-ILE-LEU-URK-UIL-URL, ...
Authors:Buratto, J, Belorusova, A.Y, Rochel, N, Guichard, G.
Deposit date:2020-02-04
Release date:2021-02-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis for alpha-Helix Mimicry and Inhibition of Protein-Protein Interactions with Oligourea Foldamers.
Angew.Chem.Int.Ed.Engl., 60, 2021
6I5O
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BU of 6i5o by Molmil
Crystal structure of SPBc2 prophage-derived protein YomS
Descriptor: SPBc2 prophage-derived uncharacterized protein YomS
Authors:Hakansson, M, Svensson, L.A, Welin, M, Al-Karadaghi, S.
Deposit date:2018-11-14
Release date:2019-11-20
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Crystal structures of the Bacillus subtilis prophage lytic cassette proteins XepA and YomS.
Acta Crystallogr D Struct Biol, 75, 2019
5EF2
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BU of 5ef2 by Molmil
RADIATION DAMAGE TO THE TRAP-RNA COMPLEX: DOSE (DWD) 21.9 MGy
Descriptor: (GAGUU)10GAG 53-NUCLEOTIDE RNA, TRYPTOPHAN, Transcription attenuation protein MtrB
Authors:Bury, C.S, McGeehan, J.E, Garman, E.F, Shevtsov, M.B.
Deposit date:2015-10-23
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:RNA protects a nucleoprotein complex against radiation damage.
Acta Crystallogr D Struct Biol, 72, 2016
6I76
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BU of 6i76 by Molmil
Galectin-3C in complex with substituted polyfluoroaryl monothiogalactoside derivative-3
Descriptor: (2~{R},3~{R},4~{S},5~{R},6~{S})-4-[4-[4-azido-2,3,5,6-tetrakis(fluoranyl)phenyl]-1,2,3-triazol-1-yl]-2-(hydroxymethyl)-6-(4-methylphenyl)sulfanyl-oxane-3,5-diol, Galectin-3
Authors:Kumar, R, Peterson, K, Nilsson, U.J, Logan, D.T.
Deposit date:2018-11-15
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Substituted polyfluoroaryl interactions with an arginine side chain in galectin-3 are governed by steric-, desolvation and electronic conjugation effects.
Org. Biomol. Chem., 17, 2019
6EJB
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BU of 6ejb by Molmil
Human Xylosyltransferase 1 in complex with peptide QEEEGSAGGQGG
Descriptor: PHOSPHATE ION, Protein AMBP, Xylosyltransferase 1
Authors:Briggs, D.C, Hohenester, E.
Deposit date:2017-09-20
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.557 Å)
Cite:Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1.
Structure, 26, 2018
6X6B
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BU of 6x6b by Molmil
Structure of the sulfate-bound form of ArrX from Chrysiogenes arsenatis
Descriptor: ArrX, SULFATE ION, TETRAETHYLENE GLYCOL
Authors:Maher, M.J, Poddar, N.
Deposit date:2020-05-27
Release date:2021-02-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural and Functional Investigation of the Periplasmic Arsenate-Binding Protein ArrX from Chrysiogenes arsenatis .
Biochemistry, 60, 2021
6B2K
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BU of 6b2k by Molmil
E45A/R132T mutant of HIV-1 capsid protein
Descriptor: CHLORIDE ION, HIV-1 capsid protein, IODIDE ION
Authors:Gres, A.T, Kirby, K.A, Sarafianos, S.G.
Deposit date:2017-09-20
Release date:2018-09-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Multidisciplinary studies with mutated HIV-1 capsid proteins reveal structural mechanisms of lattice stabilization.
Nat Commun, 14, 2023
7JST
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BU of 7jst by Molmil
Crystal structure of SARS-CoV-2 3CL in apo form
Descriptor: 3C-like proteinase, PHOSPHATE ION
Authors:Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Huang, Y, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D.
Deposit date:2020-08-16
Release date:2021-03-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors.
Nat Commun, 12, 2021
6POA
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BU of 6poa by Molmil
Structure of human neuronal nitric oxide synthase R354A/G357D mutant heme domain in complex with 7-(3-(Aminomethyl)-4-(pyridin-3-ylmethoxy)phenyl)-4-methylquinolin-2-amine
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, 7-{3-(aminomethyl)-4-[(pyridin-3-yl)methoxy]phenyl}-4-methylquinolin-2-amine, Nitric oxide synthase, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2019-07-03
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.809 Å)
Cite:First Contact: 7-Phenyl-2-Aminoquinolines, Potent and Selective Neuronal Nitric Oxide Synthase Inhibitors That Target an Isoform-Specific Aspartate.
J.Med.Chem., 63, 2020
8PRT
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BU of 8prt by Molmil
The structure of nvBagel8 in the presence of Co(II)
Descriptor: COBALT (II) ION, Cell surface protein
Authors:Vandebroek, L, Voet, A.R.D, Lee, X.Y.
Deposit date:2023-07-12
Release date:2024-07-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structure of nvBagel8 in the presence of Co(II)
To Be Published
6EBR
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BU of 6ebr by Molmil
Activation of RR02 bound to BeF3
Descriptor: BERYLLIUM TRIFLUORIDE ION, DNA-binding response regulator, MANGANESE (II) ION
Authors:Riboldi-Tunnicliffe, A, Panjikar, S.
Deposit date:2018-08-06
Release date:2019-11-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.816 Å)
Cite:Activation of RR02 bound to BeF3
To Be Published
8PGC
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BU of 8pgc by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2868
Descriptor: 7-[(1~{S})-1-[5-[2-(1-azanylcyclopropyl)ethyl]-2-oxidanylidene-1,3-oxazol-3-yl]ethyl]-3-[3-fluoranyl-4-(methylsulfonylmethyl)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-18
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2868
To Be Published
5EMZ
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BU of 5emz by Molmil
Crystal structure of K48-linked diubiquitin with F45W mutation in the proximal unit
Descriptor: Polyubiquitin-B, SULFATE ION
Authors:Nakasone, M.A, Paukstelis, P.J, Fushman, D.
Deposit date:2015-11-07
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural characterization and practical fluorescence applications of the F45W ubiquitin mutant
To Be Published
6EBU
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BU of 6ebu by Molmil
Crystal structure of Aquifex aeolicus LpxE
Descriptor: LpxE, SULFATE ION, octyl beta-D-glucopyranoside
Authors:Wu, Q, Wang, S, Zhou, P.
Deposit date:2018-08-07
Release date:2019-06-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.372 Å)
Cite:The Lipid A 1-Phosphatase, LpxE, Functionally Connects Multiple Layers of Bacterial Envelope Biogenesis.
Mbio, 10, 2019
8PGV
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BU of 8pgv by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 3396
Descriptor: 7-[(1~{S})-1-[2-(aminomethyl)-6-oxidanylidene-5-oxa-7-azaspiro[3.4]octan-7-yl]ethyl]-3-[3-fluoranyl-4-(oxetan-3-ylsulfonylamino)phenyl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-18
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 3396
To Be Published
5EO7
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BU of 5eo7 by Molmil
Crystal structure of AOL
Descriptor: Predicted protein, SULFATE ION, methyl 1-seleno-alpha-L-fucopyranoside
Authors:Kato, R, Kiso, M, Ishida, H, Ando, H, Suzuki, T, Shimabukuro, S, Makyio, H.
Deposit date:2015-11-10
Release date:2016-06-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Six independent fucose-binding sites in the crystal structure of Aspergillus oryzae lectin
Biochem.Biophys.Res.Commun., 477, 2016
6PGE
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BU of 6pge by Molmil
WDR5delta32 bound to ethyl 3-(4-(hydroxymethyl)-1H-imidazol-2-yl)propanoate
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, WD repeat-containing protein 5, ...
Authors:Dennis, M.L, Peat, T.S.
Deposit date:2019-06-24
Release date:2019-12-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Fragment screening for a protein-protein interaction inhibitor to WDR5.
Struct Dyn., 6, 2019
6XZK
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BU of 6xzk by Molmil
Structure of zVDR LBD-Calcitriol in complex with chimera 13
Descriptor: 5-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANE-1,3-DIOL, ACETATE ION, GLU-ASN-ALA-UIA-URL-URY-URV-UZN-LYS, ...
Authors:Buratto, J, Belorusova, A.Y, Rochel, N, Guichard, G.
Deposit date:2020-02-04
Release date:2021-02-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for alpha-Helix Mimicry and Inhibition of Protein-Protein Interactions with Oligourea Foldamers.
Angew.Chem.Int.Ed.Engl., 60, 2021
8PGF
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BU of 8pgf by Molmil
Crystal structure of the metallo-beta-lactamase VIM1 with 2941
Descriptor: 7-[(1~{S})-1-[[4-(aminomethyl)phenyl]carbonylamino]ethyl]-3-[6-(morpholin-4-ylmethyl)pyridin-3-yl]-1~{H}-indole-2-carboxylic acid, Beta-lactamase VIM-1, ZINC ION
Authors:Calvopina, K, Brem, J, Farley, A.J.M, Allen, M.D, Schofield, C.J.
Deposit date:2023-06-18
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the metallo-beta-lactamase VIM1 with 2941
To Be Published
6B3E
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BU of 6b3e by Molmil
Crystal structure of human CDK12/CyclinK in complex with an inhibitor
Descriptor: 1,2-ETHANEDIOL, 2-[(2S)-1-(6-{[(4,5-difluoro-1H-benzimidazol-2-yl)methyl]amino}-9-ethyl-9H-purin-2-yl)piperidin-2-yl]ethan-1-ol, Cyclin-K, ...
Authors:Ferguson, A.D.
Deposit date:2017-09-21
Release date:2017-12-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Structure-Based Design of Selective Noncovalent CDK12 Inhibitors.
ChemMedChem, 13, 2018
5ENE
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BU of 5ene by Molmil
Crystal structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in complex with 5-Amino-2-benzyl-1,3-oxazole-4-carbonitrile (SGC - Diamond I04-1 fragment screening)
Descriptor: 5-azanyl-2-(phenylmethyl)-1,3-oxazole-4-carbonitrile, PH-interacting protein
Authors:Krojer, T, Talon, R, Collins, P, Bradley, A, Cox, O, Amin, J, Szykowska, A, Burgess-Brown, N, Spencer, J, Brennan, P, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2015-11-09
Release date:2016-04-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A poised fragment library enables rapid synthetic expansion yielding the first reported inhibitors of PHIP(2), an atypical bromodomain.
Chem Sci, 7, 2016

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