PDB: 45953 resultsInfo pagesStatus searchChemie searchBIRD

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8CXF	Crystal structure of an i-motif from the HRAS promoter region Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, HRAS DNA Authors: Yatsunyk, L.A, Li, K.S. Deposit date: 2022-05-20 Release date: 2023-05-10 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Crystal Structure of an i-Motif from the HRAS Oncogene Promoter. Angew.Chem.Int.Ed.Engl., 62, 2023
8DHC	Crystal structure of an i-motif from the HRAS promoter region Descriptor: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE, HRAS DNA Authors: Yatsunyk, L.A, Li, K.S. Deposit date: 2022-06-27 Release date: 2023-05-10 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Crystal Structure of an i-Motif from the HRAS Oncogene Promoter. Angew.Chem.Int.Ed.Engl., 62, 2023
3K05	The crystal structure of MDC1 BRCT T2067D in complex with a minimal recognition tetrapeptide with an amidated C-terminus Descriptor: GLYCEROL, Mediator of DNA damage checkpoint protein 1, phospho peptide Authors: Campbell, S.J, Edwards, R.A, Glover, J.N. Deposit date: 2009-09-24 Release date: 2010-03-02 Last modified: 2021-10-13 Method: X-RAY DIFFRACTION (1.33 Å) Cite: Comparison of the Structures and Peptide Binding Specificities of the BRCT Domains of MDC1 and BRCA1 Structure, 18, 2010
4BCS	Crystal structure of an avidin mutant Descriptor: ACETATE ION, BIOTIN, CHIMERIC AVIDIN, ... Authors: Airenne, T.T, Niederhauser, B, Hytonen, V.P, Kulomaa, M.S, Johnson, M.S. Deposit date: 2012-10-03 Release date: 2013-10-16 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A Novel Chimeric Avidin with Increased Thermal Stability Using DNA Shuffling. Plos One, 9, 2014
2ADL	Solution structure of the bacterial antitoxin CcdA: Implications for DNA and toxin binding Descriptor: CcdA Authors: Madl, T, VanMelderen, L, Oberer, M, Keller, W, Khatai, L, Zangger, K. Deposit date: 2005-07-20 Release date: 2006-08-22 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Structural basis for nucleic acid and toxin recognition of the bacterial antitoxin CcdA J.Mol.Biol., 364, 2006
2ADN	Solution structure of the bacterial antitoxin CcdA: Implications for DNA and toxin binding Descriptor: CcdA Authors: Madl, T, VanMelderen, L, Oberer, M, Keller, W, Khatai, L, Zangger, K. Deposit date: 2005-07-20 Release date: 2006-08-22 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Structural basis for nucleic acid and toxin recognition of the bacterial antitoxin CcdA J.Mol.Biol., 364, 2006
1HUS	RIBOSOMAL PROTEIN S7 Descriptor: RIBOSOMAL PROTEIN S7 Authors: Hosaka, H, Nakagawa, A, Tanaka, I. Deposit date: 1997-08-08 Release date: 1998-01-28 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Ribosomal protein S7: a new RNA-binding motif with structural similarities to a DNA architectural factor. Structure, 5, 1997
1MU5	Structure of topoisomerase subunit Descriptor: CALCIUM ION, Type II DNA topoisomerase VI Subunit B Authors: Corbett, K.D, Berger, J.M. Deposit date: 2002-09-23 Release date: 2003-01-07 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2 Å) Cite: Structure of the topoisomerase VI-B subunit: implications for type II topoisomerase mechanism and evolution Embo J., 22, 2003
1OLO	Hexameric Replicative DNA Helicase RepA from Plasmid RSF1010 - Cubic Crystal Structure Descriptor: REGULATORY PROTEIN REPA, SULFATE ION Authors: Niedenzu, T, Saenger, W. Deposit date: 2003-08-08 Release date: 2003-09-19 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Hexameric Rsf1010 Helicase Repa: The Structural and Functional Importance of Single Amino Acid Residues Nucleic Acids Res., 31, 2003
1X9Z	Crystal structure of the MutL C-terminal domain Descriptor: CHLORIDE ION, DNA mismatch repair protein mutL, GLYCEROL, ... Authors: Guarne, A, Ramon-Maiques, S, Wolff, E.M, Ghirlando, R, Hu, X, Miller, J.H, Yang, W. Deposit date: 2004-08-24 Release date: 2004-10-26 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair Embo J., 23, 2004
5WI2	Crystal structure of the KA1 domain from human Chk1 Descriptor: ACETATE ION, GLYCEROL, cDNA FLJ56409, ... Authors: Emptage, R.P, Marmorstein, R. Deposit date: 2017-07-18 Release date: 2017-10-04 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.495 Å) Cite: Intramolecular autoinhibition of checkpoint kinase 1 is mediated by conserved basic motifs of the C-terminal kinase-associated 1 domain. J. Biol. Chem., 292, 2017
1QYK	GCATGCT + Barium Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', BARIUM ION Authors: Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A. Deposit date: 2003-09-11 Release date: 2003-10-21 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT) To be published
1QZL	GCATGCT + Cobalt Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', COBALT (II) ION Authors: Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A. Deposit date: 2003-09-17 Release date: 2003-10-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT) To be published
1QYL	GCATGCT + Vanadium Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', VANADIUM ION Authors: Cardin, C.J, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A. Deposit date: 2003-09-11 Release date: 2003-10-21 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1 Å) Cite: Metal Ion Distribution and Stabilisation of the DNA Quadruplex Structure Formed by d(GCATGCT) To be Published
1R2O	d(GCATGCT) + Ni2+ Descriptor: 5'-D(*GP*CP*AP*TP*GP*CP*T)-3', NICKEL (II) ION Authors: Cardin, J.C, Gan, Y, Thorpe, J.H, Teixeira, S.C.M, Gale, B.C, Moraes, M.I.A. Deposit date: 2003-09-29 Release date: 2003-10-21 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Metal Ion Distribution and Stabilization of the DNA Quadruplex Structure Formed by d(GCATGCT) To be published
1VDE	PI-SCEI, A HOMING ENDONUCLEASE WITH PROTEIN SPLICING ACTIVITY Descriptor: PI-SCEI Authors: Duan, X, Quiocho, F.A. Deposit date: 1997-04-01 Release date: 1998-04-08 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of PI-SceI, a homing endonuclease with protein splicing activity. Cell(Cambridge,Mass.), 89, 1997
2CW8	Crystal structure of intein homing endonuclease II Descriptor: Endonuclease PI-PkoII, GLYCEROL, SULFATE ION Authors: Matsumura, H, Takahashi, H, Inoue, T, Hashimoto, H, Nishioka, M, Fujiwara, S, Takagi, M, Imanaka, T, Kai, Y. Deposit date: 2005-06-17 Release date: 2006-04-18 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal structure of intein homing endonuclease II encoded in DNA polymerase gene from hyperthermophilic archaeon Thermococcus kodakaraensis strain KOD1 Proteins, 63, 2006
2LCJ	Solution NMR structure of Pab PolII Intein Descriptor: Pab polC intein Authors: Jiajing, L, Mills, K.V, Albracht, C.D. Deposit date: 2011-04-29 Release date: 2011-09-21 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural and Mutational Studies of a Hyperthermophilic Intein from DNA Polymerase II of Pyrococcus abyssi. J.Biol.Chem., 286, 2011
2C0N	Crystal Structure of A197 from STIV Descriptor: 1,4-DIETHYLENE DIOXIDE, A197, NICKEL (II) ION, ... Authors: Larson, E.T, Reiter, D, Young, M, Lawrence, C.M. Deposit date: 2005-09-06 Release date: 2005-09-29 Last modified: 2019-05-08 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Structure of A197 from Sulfolobus Turreted Icosahedral Virus: A Crenarchaeal Viral Glycosyltransferase Exhibiting the Gt-A Fold. J.Virol., 80, 2006
6GRG	E. coli Microcin synthetase McbBCD complex with pro-MccB17, ADP and phosphate bound Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... Authors: Ghilarov, D, Stevenson, C.E.M, Travin, D.Y, Piskunova, J, Serebryakova, M, Maxwell, A, Lawson, D.M, Severinov, K. Deposit date: 2018-06-11 Release date: 2019-01-30 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Architecture of Microcin B17 Synthetase: An Octameric Protein Complex Converting a Ribosomally Synthesized Peptide into a DNA Gyrase Poison. Mol. Cell, 73, 2019
6GRI	E. coli Microcin synthetase McbBCD complex Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, Microcin B17-processing protein McbB, ... Authors: Ghilarov, D, Stevenson, C.E.M, Travin, D.Y, Piskunova, J, Serebryakova, M, Maxwell, A, Lawson, D.M, Severinov, K. Deposit date: 2018-06-11 Release date: 2019-01-30 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Architecture of Microcin B17 Synthetase: An Octameric Protein Complex Converting a Ribosomally Synthesized Peptide into a DNA Gyrase Poison. Mol. Cell, 73, 2019
6GRH	E. coli Microcin synthetase McbBCD complex with truncated pro-MccB17 bound Descriptor: 1,2-ETHANEDIOL, Bacteriocin microcin B17, CHLORIDE ION, ... Authors: Ghilarov, D, Stevenson, C.E.M, Travin, D.Y, Piskunova, J, Serebryakova, M, Maxwell, A, Lawson, D.M, Severinov, K. Deposit date: 2018-06-11 Release date: 2019-01-30 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Architecture of Microcin B17 Synthetase: An Octameric Protein Complex Converting a Ribosomally Synthesized Peptide into a DNA Gyrase Poison. Mol. Cell, 73, 2019
3TAZ	Crystal structure of NurA bound to dAMP and manganese Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, DNA double-strand break repair protein nurA, GLYCEROL, ... Authors: Chae, J, Kim, Y.C, Cho, Y. Deposit date: 2011-08-04 Release date: 2011-11-23 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Crystal structure of the NurA-dAMP-Mn2+ complex Nucleic Acids Res., 40, 2012
6GOS	E. coli Microcin synthetase McbBCD complex with pro-MccB17 bound Descriptor: 1,2-ETHANEDIOL, Bacteriocin microcin B17, CHLORIDE ION, ... Authors: Ghilarov, D, Stevenson, C.E.M, Travin, D.Y, Piskunova, J, Serebryakova, M, Maxwell, A, Lawson, D.M, Severinov, K. Deposit date: 2018-06-04 Release date: 2019-01-30 Last modified: 2019-03-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Architecture of Microcin B17 Synthetase: An Octameric Protein Complex Converting a Ribosomally Synthesized Peptide into a DNA Gyrase Poison. Mol. Cell, 73, 2019
2A40	Ternary complex of the WH2 domain of WAVE with Actin-DNAse I Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Chereau, D, Kerff, F, Dominguez, R. Deposit date: 2005-06-27 Release date: 2005-11-01 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Actin-bound structures of Wiskott-Aldrich syndrome protein (WASP)-homology domain 2 and the implications for filament assembly Proc.Natl.Acad.Sci.Usa, 102, 2005

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