4CYB
| DpsC from Streptomyces coelicolor | Descriptor: | FE (III) ION, PUTATIVE DNA PROTECTION PROTEIN, SODIUM ION | Authors: | Townsend, P.D, Hitchings, M.D, Del Sol, R, Pohl, E. | Deposit date: | 2014-04-10 | Release date: | 2014-06-25 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (1.78 Å) | Cite: | A Tale of Tails: Deciphering the Contribution of Terminal Tails to the Biochemical Properties of Two Dps Proteins from Streptomyces Coelicolor Cell.Mol.Life Sci., 71, 2014
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5JPA
| Hexameric HIV-1 CA H12Y mutant | Descriptor: | Capsid Protein P24 | Authors: | Jacques, D.A, James, L.C. | Deposit date: | 2016-05-03 | Release date: | 2016-08-10 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | HIV-1 uses dynamic capsid pores to import nucleotides and fuel encapsidated DNA synthesis. Nature, 536, 2016
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7Y60
| Cryo-EM structure of human CAF1LC bound right-handed Di-tetrasome | Descriptor: | Chromatin assembly factor 1 subunit A, Chromatin assembly factor 1 subunit B, Histone H3.1, ... | Authors: | Liu, C.P, Yu, C, Yu, Z.Y, Xu, R.M. | Deposit date: | 2022-06-18 | Release date: | 2023-08-16 | Last modified: | 2023-09-06 | Method: | ELECTRON MICROSCOPY (3.8 Å) | Cite: | Structural insights into histone binding and nucleosome assembly by chromatin assembly factor-1. Science, 381, 2023
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5KED
| Structure of the 2.65 Angstrom P2(1) crystal of K. pneumonia MrkH | Descriptor: | Flagellar brake protein YcgR | Authors: | Schumacher, M. | Deposit date: | 2016-06-09 | Release date: | 2016-08-17 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.65 Å) | Cite: | To be released:
Structures of K. pneumonia MrkH: dual utilization of the PilZ fold for c-di-GMP and DNA binding by a novel activator of biofilm genes To Be Published
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1K8J
| NMR STRUCTURE OF THE CK14 DNA DUPLEX: A PORTION OF THE KNOWN NF-kB SEQUENCE CK1 | Descriptor: | FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX | Authors: | Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G. | Deposit date: | 2001-10-24 | Release date: | 2003-04-15 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB Bioorg.Chem., 30, 2002
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1T5L
| Crystal structure of the DNA repair protein UvrB point mutant Y96A revealing a novel fold for domain 2 | Descriptor: | UvrABC system protein B, ZINC ION | Authors: | Truglio, J.J, Croteau, D.L, Skorvaga, M, DellaVecchia, M.J, Theis, K, Mandavilli, B.S, Van Houten, B, Kisker, C. | Deposit date: | 2004-05-04 | Release date: | 2004-06-22 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Interactions between UvrA and UvrB: the role of UvrB's domain 2 in nucleotide excision repair Embo J., 23, 2004
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1IXR
| RuvA-RuvB complex | Descriptor: | Holliday junction DNA helicase ruvA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, RuvB | Authors: | Yamada, K, Miyata, T, Tsuchiya, D, Oyama, T, Fujiwara, Y, Ohnishi, T, Iwasaki, H, Shinagawa, H, Ariyoshi, M, Mayanagi, K, Morikawa, K. | Deposit date: | 2002-07-04 | Release date: | 2002-11-06 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Crystal Structure of the RuvA-RuvB Complex: A Structural Basis for the Holliday Junction Migrating Motor Machinery Mol.Cell, 10, 2002
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7KH1
| Baseplate Complex for Myoviridae Phage XM1 | Descriptor: | baseplate organization protein, gp11, baseplate stabilizing protein, ... | Authors: | Wang, Z, Klose, T, Jiang, W, Kuhn, R.J. | Deposit date: | 2020-10-19 | Release date: | 2021-10-27 | Last modified: | 2024-05-29 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Structure of Vibrio phage XM1, a simple contractile DNA injection machine Biorxiv, 2021
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7KLN
| Myoviridae Phage XM1 Neck Region (12-fold) | Descriptor: | Head completion protein, gp1, Portal protein | Authors: | Wang, Z, Klose, T, Jiang, W, Kuhn, R.J. | Deposit date: | 2020-10-30 | Release date: | 2021-11-03 | Last modified: | 2022-05-25 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Structure of Vibrio phage XM1, a simple contractile DNA injection machine Biorxiv, 2021
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7KJK
| The Neck region of Phage XM1 (6-fold symmetry) | Descriptor: | Collar spike protein, Head completion protein, Tail sheath protein, ... | Authors: | Wang, Z, Klose, T, Jiang, W, Kuhn, R.J. | Deposit date: | 2020-10-26 | Release date: | 2021-11-03 | Last modified: | 2024-05-29 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Structure of Vibrio phage XM1, a simple contractile DNA injection machine Biorxiv, 2021
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7KMX
| The capsid of Myoviridae Phage XM1 | Descriptor: | Major capsid protein, Minor capsid protein | Authors: | Wang, Z, Klose, T, Jiang, W, Kuhn, R.J. | Deposit date: | 2020-11-03 | Release date: | 2021-11-10 | Last modified: | 2024-05-29 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Structure of Vibrio phage XM1, a simple contractile DNA injection machine Biorxiv, 2021
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4BAE
| Optimisation of pyrroleamides as mycobacterial GyrB ATPase inhibitors: Structure Activity Relationship and in vivo efficacy in the mouse model of tuberculosis | Descriptor: | 2-[(3S,4R)-4-[(3-bromanyl-4-chloranyl-5-methyl-1H-pyrrol-2-yl)carbonylamino]-3-methoxy-piperidin-1-yl]-4-(2-methyl-1,2,4-triazol-3-yl)-1,3-thiazole-5-carboxylic acid, CALCIUM ION, DNA GYRASE SUBUNIT B, ... | Authors: | Read, J.A, Gingell, H.G, Madhavapeddi, P. | Deposit date: | 2012-09-13 | Release date: | 2013-10-30 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.35 Å) | Cite: | Optimization of Pyrrolamides as Mycobacterial Gyrb ATPase Inhibitors: Structure Activity Relationship and in Vivo Efficacy in the Mouse Model of Tuberculosis. Antimicrob.Agents Chemother., 58, 2014
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1KG3
| Crystal structure of the core fragment of MutY from E.coli at 1.55A resolution | Descriptor: | A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ... | Authors: | Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G. | Deposit date: | 2001-11-26 | Release date: | 2002-11-26 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis To be Published
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4DA2
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7BOZ
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7BOY
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7BOX
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1KG6
| Crystal structure of the K142R mutant of E.coli MutY (core fragment) | Descriptor: | A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ... | Authors: | Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G. | Deposit date: | 2001-11-26 | Release date: | 2002-11-26 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis To be Published
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1KG4
| Crystal structure of the K142A mutant of E. coli MutY (core fragment) | Descriptor: | A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ... | Authors: | Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G. | Deposit date: | 2001-11-26 | Release date: | 2002-11-26 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis To be Published
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1KG2
| Crystal structure of the core fragment of MutY from E.coli at 1.2A resolution | Descriptor: | A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ... | Authors: | Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G. | Deposit date: | 2001-11-26 | Release date: | 2002-11-26 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.2 Å) | Cite: | Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis To be Published
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1KG7
| Crystal Structure of the E161A mutant of E.coli MutY (core fragment) | Descriptor: | A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ... | Authors: | Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G. | Deposit date: | 2001-11-26 | Release date: | 2002-11-26 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis To be Published
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1KG5
| Crystal structure of the K142Q mutant of E.coli MutY (core fragment) | Descriptor: | A/G-specific adenine glycosylase, GLYCEROL, IRON/SULFUR CLUSTER, ... | Authors: | Gilboa, R, Kilshtein, A, Zharkov, D.O, Kycia, J.H, Gerchman, S.E, Grollman, A.P, Shoham, G. | Deposit date: | 2001-11-26 | Release date: | 2002-11-26 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Analysis of the E.coli MutY DNA glycosylase structure and function by site-directed mutagenesis To be Published
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5D7D
| Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 7-propyl-3-[2-(pyridin-3-yl)-1,3-thiazol-5-yl]-1,7-dihydro-6H-pyrazolo[3,4-b]pyridin-6-one, CHLORIDE ION, ... | Authors: | Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C. | Deposit date: | 2015-08-13 | Release date: | 2015-11-11 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Discovery of Indazole Derivatives as a Novel Class of Bacterial Gyrase B Inhibitors. Acs Med.Chem.Lett., 6, 2015
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5D7R
| Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 3-hydroxy-5-[5-(6-hydroxy-7-propyl-2H-indazol-3-yl)-1,3-thiazol-2-yl]pyridine-2-carboxylic acid, CHLORIDE ION, ... | Authors: | Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C. | Deposit date: | 2015-08-14 | Release date: | 2015-11-18 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Discovery of Indazole Derivatives as a Novel Class of Bacterial Gyrase B Inhibitors. Acs Med.Chem.Lett., 6, 2015
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2ETX
| Crystal Structure of MDC1 Tandem BRCT Domains | Descriptor: | Mediator of DNA damage checkpoint protein 1 | Authors: | Wasielewski, E, Kim, Y, Joachimiak, A, Thompson, J.R, Mer, G. | Deposit date: | 2005-10-27 | Release date: | 2005-11-15 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.33 Å) | Cite: | Molecular Basis for the Association of Microcephalin (MCPH1) Protein with the Cell Division Cycle Protein 27 (Cdc27) Subunit of the Anaphase-promoting Complex. J.Biol.Chem., 287, 2012
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