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3G50
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Crystal Structure of NiSOD D3A mutant at 1.9 A
Descriptor: NICKEL (II) ION, Superoxide dismutase [Ni]
Authors:Garman, S.C, Guce, A.I, Herbst, R.W, Bryngelson, P.A, Cabelli, D.E, Higgins, K.A, Ryan, K.C, Maroney, M.J.
Deposit date:2009-02-04
Release date:2009-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of conserved tyrosine residues in NiSOD catalysis: a case of convergent evolution
Biochemistry, 48, 2009
3G4Z
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Crystal Structure of NiSOD Y9F mutant at 1.9 A
Descriptor: BROMIDE ION, NICKEL (II) ION, Superoxide dismutase [Ni]
Authors:Garman, S.C, Guce, A.I, Herbst, R.W, Bryngelson, P.A, Cabelli, D.E, Higgins, K.A, Ryan, K.C, Maroney, M.J.
Deposit date:2009-02-04
Release date:2009-04-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Role of conserved tyrosine residues in NiSOD catalysis: a case of convergent evolution
Biochemistry, 48, 2009
3G84
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BU of 3g84 by Molmil
Crystal structure of the trimeric neck and carbohydrate recognition domain of R343V mutant of human surfactant protein D in complex with alpha 1,2 dimannose.
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Head, J.F.
Deposit date:2009-02-11
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Recognition of mannosylated ligands and influenza A virus by human surfactant protein D: contributions of an extended site and residue 343.
Biochemistry, 48, 2009
3FU7
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BU of 3fu7 by Molmil
Melanocarpus albomyces laccase crystal soaked (4 sec) with 2,6-dimethoxyphenol
Descriptor: 2,6-dimethoxycyclohexa-2,5-diene-1,4-dione, 2,6-dimethoxyphenol, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kallio, J.P, Hakulinen, N, Rouvinen, J.
Deposit date:2009-01-14
Release date:2009-09-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure Function Studies of a Melanocarpus albomyces Laccase Suggest a Pathway for Oxidation of Phenolic Compounds.
J.Mol.Biol., 392, 2009
3FV6
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Crystal Structure of the CBS domains from the Bacillus subtilis CcpN repressor
Descriptor: YqzB protein
Authors:Chaix, D, Arold, S, Hoh, F, Declerck, N.
Deposit date:2009-01-15
Release date:2010-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Ligand recognition by the energy sensor domain of the CcpN repressor
To be Published
3FYC
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Crystal Structure of Dim1 from the thermophilic archeon, Methanocaldococcus jannaschi
Descriptor: PHOSPHATE ION, Probable dimethyladenosine transferase
Authors:Scarsdale, J.N, Musayev, F.N, Rife, J.P.
Deposit date:2009-01-22
Release date:2009-06-30
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional divergence within the Dim1/KsgA family of rRNA methyltransferases.
J.Mol.Biol., 391, 2009
3G08
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BU of 3g08 by Molmil
Crystal structure of the alpha-galactosylceramide analog OCH in complex with mouse CD1d
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2 microglobulin, ...
Authors:Zajonc, D.M.
Deposit date:2009-01-27
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanisms for glycolipid antigen-driven cytokine polarization by Valpha14i NKT cells.
J.Immunol., 184, 2010
3G86
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Hepatitis C virus polymerase NS5B (BK 1-570) with thiazine inhibitor
Descriptor: N-{3-[6-fluoro-1-(4-fluorobenzyl)-4-hydroxy-2-oxo-1,2-dihydroquinolin-3-yl]-1,1-dioxido-4H-1,4-benzothiazin-7-yl}methanesulfonamide, NICKEL (II) ION, RNA-directed RNA polymerase
Authors:Harris, S.F, Ghate, M.
Deposit date:2009-02-11
Release date:2009-09-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Non-nucleoside inhibitors of HCV polymerase NS5B. Part 2: Synthesis and structure-activity relationships of benzothiazine-substituted quinolinediones
Bioorg.Med.Chem.Lett., 19, 2009
3DSJ
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Crystal Structure of Arabidopsis thaliana Allene Oxide Synthase Variant (F137L) (At-AOS(F137L), cytochrome P450 74A, CYP74A) Complexed with 13(S)-HOD at 1.60 A Resolution
Descriptor: (9Z,11E,13S)-13-hydroxyoctadeca-9,11-dienoic acid, Cytochrome P450 74A, chloroplast, ...
Authors:Lee, D.S, Nioche, P, Raman, C.S.
Deposit date:2008-07-12
Release date:2008-08-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the evolutionary paths of oxylipin biosynthetic enzymes
Nature, 455, 2008
3DYG
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BU of 3dyg by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-461
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-FLUORO-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM, ACETATE ION, ...
Authors:Cao, R, Gao, Y, Robinson, H, Goddard, A, Oldfield, E.
Deposit date:2008-07-27
Release date:2009-05-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Lipophilic bisphosphonates as dual farnesyl/geranylgeranyl diphosphate synthase inhibitors: an X-ray and NMR investigation.
J.Am.Chem.Soc., 131, 2009
3G83
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BU of 3g83 by Molmil
Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with alpha 1,2 dimannose.
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
Authors:Head, J.F.
Deposit date:2009-02-11
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recognition of mannosylated ligands and influenza A virus by human surfactant protein D: contributions of an extended site and residue 343.
Biochemistry, 48, 2009
3FU8
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BU of 3fu8 by Molmil
Melanocarpus albomyces laccase crystal soaked (10 sec) with 2,6-dimethoxyphenol
Descriptor: 2,6-dimethoxyphenol, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kallio, J.P, Hakulinen, N, Rouvinen, J.
Deposit date:2009-01-14
Release date:2009-09-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Function Studies of a Melanocarpus albomyces Laccase Suggest a Pathway for Oxidation of Phenolic Compounds.
J.Mol.Biol., 392, 2009
3FXD
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BU of 3fxd by Molmil
Crystal structure of interacting domains of IcmR and IcmQ
Descriptor: Protein IcmQ, Protein IcmR
Authors:Raychaudhury, S, Akey, C.W, Head, J.F.
Deposit date:2009-01-20
Release date:2009-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Function of Interacting IcmR-IcmQ Domains from a Type IVb Secretion System in Legionella pneumophila.
Structure, 17, 2009
3G7K
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BU of 3g7k by Molmil
Crystal Structure of Methylitaconate-delta-isomerase
Descriptor: 3-methylitaconate isomerase
Authors:Messerschmidt, A, Macieira, S, Velarde, M.
Deposit date:2009-02-10
Release date:2009-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure and putative mechanism of 3-methylitaconate-delta-isomerase from Eubacterium barkeri
J.Mol.Biol., 391, 2009
3G81
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BU of 3g81 by Molmil
Crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein D in complex with alpha methyl mannoside
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, methyl alpha-D-mannopyranoside
Authors:Head, J.F.
Deposit date:2009-02-11
Release date:2009-03-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Recognition of mannosylated ligands and influenza A virus by human surfactant protein D: contributions of an extended site and residue 343.
Biochemistry, 48, 2009
5V8K
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BU of 5v8k by Molmil
Homodimeric reaction center of H. modesticaldum
Descriptor: 1-[GLYCEROLYLPHOSPHONYL]-2-[8-(2-HEXYL-CYCLOPROPYL)-OCTANAL-1-YL]-3-[HEXADECANAL-1-YL]-GLYCEROL, 4,4'-Diaponeurosporene, 8(1)-OH-Chlorophyll aF, ...
Authors:Gisriel, C, Sarrou, I, Ferlez, B, Golbeck, J, Redding, K.E, Fromme, R.
Deposit date:2017-03-22
Release date:2017-09-06
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a symmetric photosynthetic reaction center-photosystem.
Science, 357, 2017
3EQ4
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BU of 3eq4 by Molmil
Model of tRNA(Leu)-EF-Tu in the ribosomal pre-accommodated state revealed by cryo-EM
Descriptor: 30S ribosomal protein S12, 50S ribosomal protein L11, Elongation factor Tu, ...
Authors:Frank, J, Li, W, Agirrezabala, X.
Deposit date:2008-09-30
Release date:2008-12-16
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Recognition of aminoacyl-tRNA: a common molecular mechanism revealed by cryo-EM.
Embo J., 27, 2008
3EQU
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BU of 3equ by Molmil
Crystal structure of penicillin-binding protein 2 from Neisseria gonorrhoeae
Descriptor: GLYCEROL, Penicillin-binding protein 2, SULFATE ION
Authors:Powell, A.J, Deacon, A.M, Nicholas, R.A, Davies, C.
Deposit date:2008-10-01
Release date:2008-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structures of Penicillin-binding Protein 2 from Penicillin-susceptible and -resistant Strains of Neisseria gonorrhoeae Reveal an Unexpectedly Subtle Mechanism for Antibiotic Resistance.
J.Biol.Chem., 284, 2009
3EIZ
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BU of 3eiz by Molmil
Crystal structure of inorganic pyrophosphatase from burkholderia pseudomallei, H32 crystal form
Descriptor: Inorganic pyrophosphatase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-09-17
Release date:2008-09-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
3E65
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BU of 3e65 by Molmil
Murine INOS dimer with HEME, pterin and inhibitor AR-C120011
Descriptor: 1-[4-(AMINOMETHYL)BENZOYL]-5'-FLUORO-1'H-SPIRO[PIPERIDINE-4,2'-QUINAZOLIN]-4'-AMINE, 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric oxide synthase, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Getzoff, E.D.
Deposit date:2008-08-14
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3DYJ
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BU of 3dyj by Molmil
Crystal Structure of the R11R12 Domains of Talin
Descriptor: TALIN-1
Authors:Gingras, A.R, Joyce, M.G, Critchley, D.R, Emsley, J.
Deposit date:2008-07-28
Release date:2009-01-27
Last modified:2021-08-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural determinants of integrin binding to the talin rod
J.Biol.Chem., 284, 2009
3DK6
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BU of 3dk6 by Molmil
Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
Descriptor: 2-amino-5-[3-(1-ethyl-1H-pyrazol-5-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N,N-dimethylbenzamide, Proto-oncogene tyrosine-protein kinase ABL1
Authors:Lewis, H.A.
Deposit date:2008-06-24
Release date:2008-07-29
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
To be Published
3DK7
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BU of 3dk7 by Molmil
Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
Descriptor: 2-amino-5-[3-(1-ethyl-1H-pyrazol-5-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]-N,N-dimethylbenzamide, Proto-oncogene tyrosine-protein kinase ABL1, SULFATE ION
Authors:Lewis, H.A.
Deposit date:2008-06-24
Release date:2008-07-29
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of mutant ABL kinase domain in complex with small molecule fragment
To be Published
3GW3
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BU of 3gw3 by Molmil
human UROD mutant K297N
Descriptor: Uroporphyrinogen decarboxylase
Authors:Hill, C.P, Phillips, J.D, Whitby, F.G, Warby, C, Kushner, J.P.
Deposit date:2009-03-31
Release date:2009-07-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and kinetic characterization of mutant human uroporphyrinogen decarboxylases.
Cell Mol Biol (Noisy-le-grand), 55, 2009
3H5H
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BU of 3h5h by Molmil
LeuD_1-186 small subunit of isopropylmalate isomerase (Rv2987c) from mycobacterium tuberculosis
Descriptor: 3-isopropylmalate dehydratase small subunit
Authors:Manikandan, K, Geerlof, A, Weiss, M.S.
Deposit date:2009-04-22
Release date:2010-04-07
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural studies on the enzyme complex isopropylmalate isomerase (LeuCD) from Mycobacterium tuberculosis
Proteins, 79, 2011

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