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2HA8
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BU of 2ha8 by Molmil
Methyltransferase Domain of Human TAR (HIV-1) RNA binding protein 1
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, TAR (HIV-1) RNA loop binding protein
Authors:Min, J, Wu, H, Zeng, H, Loppnau, P, Battaile, K, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-06-12
Release date:2006-07-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The Crystal Structure of Methyltransferase Domain of Human TAR (HIV-1) RNA binding protein 1 in complex with S-adenosyl-L-homocystein.
To be Published
2MKE
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BU of 2mke by Molmil
Solution structure of CPEB1 ZZ domain in the free state
Descriptor: Cytoplasmic polyadenylation element-binding protein 1, ZINC ION
Authors:Afroz, T, Skrisovska, L, Belloc, E, Boixet, J.G, Mendez, R, Allain, F.H.-T.
Deposit date:2014-02-06
Release date:2014-07-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A fly trap mechanism provides sequence-specific RNA recognition by CPEB proteins
Genes Dev., 28, 2014
4BTG
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BU of 4btg by Molmil
Coordinates of the bacteriophage phi6 capsid subunits (P1A and P1B) fitted into the cryoEM reconstruction of the procapsid at 4.4 A resolution
Descriptor: MAJOR INNER PROTEIN P1
Authors:Nemecek, D, Boura, E, Wu, W, Cheng, N, Plevka, P, Qiao, J, Mindich, L, Heymann, J.B, Hurley, J.H, Steven, A.C.
Deposit date:2013-06-17
Release date:2013-08-14
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Subunit Folds and Maturation Pathway of a Dsrna Virus Capsid.
Structure, 21, 2013
8ZJB
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BU of 8zjb by Molmil
Oomycete Nudix effectors display WY-Nudix conformations with mRNA decapping activity
Descriptor: Nudix hydrolase domain-containing protein
Authors:Xing, W, Xing, W.
Deposit date:2024-05-14
Release date:2024-07-03
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:Oomycete Nudix effectors display WY-Nudix conformation and mRNA decapping activity.
J Integr Plant Biol, 66, 2024
1YN9
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BU of 1yn9 by Molmil
Crystal structure of baculovirus RNA 5'-phosphatase complexed with phosphate
Descriptor: PHOSPHATE ION, polynucleotide 5'-phosphatase
Authors:Changela, A, Martins, A, Shuman, S, Mondragon, A.
Deposit date:2005-01-24
Release date:2005-02-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of baculovirus RNA triphosphatase complexed with phosphate
J.Biol.Chem., 280, 2005
4PZK
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BU of 4pzk by Molmil
Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Maltseva, N, Kim, Y, Shatsman, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-03-31
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.
To be Published
7CT9
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BU of 7ct9 by Molmil
Crystal structure of SAH bound CmoB from Vibrio Vulnificus
Descriptor: MALONATE ION, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Kim, J, Jeong, S.
Deposit date:2020-08-18
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural snapshots of CmoB in various states during wobble uridine modification of tRNA.
Biochem.Biophys.Res.Commun., 534, 2021
7CTA
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BU of 7cta by Molmil
Crystal structure of Cx-SAM bound CmoB from Vibrio vulnificus
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, SULFATE ION, tRNA U34 carboxymethyltransferase
Authors:Kim, J, Jeong, S.
Deposit date:2020-08-18
Release date:2021-03-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural snapshots of CmoB in various states during wobble uridine modification of tRNA.
Biochem.Biophys.Res.Commun., 534, 2021
4DQJ
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BU of 4dqj by Molmil
Structural Investigation of Bacteriophage Phi6 Lysin (in complex with chitotetraose)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, Membrane protein Phi6 P5
Authors:Dessau, M.A, Modis, Y.
Deposit date:2012-02-16
Release date:2013-01-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.
PLoS Genet, 8, 2012
3JD7
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BU of 3jd7 by Molmil
The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Lee, H, Shingler, K.L, Organtini, L.J, Ashley, R.E, Makhov, A.M, Conway, J.F, Hafenstein, S.
Deposit date:2016-04-29
Release date:2016-09-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The novel asymmetric entry intermediate of a picornavirus captured with nanodiscs.
Sci Adv, 2, 2016
4DQ5
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BU of 4dq5 by Molmil
Structural Investigation of Bacteriophage Phi6 Lysin (WT)
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, Membrane protein Phi6 P5wt
Authors:Dessau, M.A, Modis, Y.
Deposit date:2012-02-15
Release date:2013-01-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.395 Å)
Cite:Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.
PLoS Genet, 8, 2012
6C3R
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BU of 6c3r by Molmil
Cricket paralysis virus RNAi suppressor protein CrPV-1A
Descriptor: Cricket paralysis virus 1A protein
Authors:Nayak, A, Kim, D.Y, Andino, R, Gross, J.
Deposit date:2018-01-10
Release date:2018-10-17
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A Viral Protein Restricts Drosophila RNAi Immunity by Regulating Argonaute Activity and Stability.
Cell Host Microbe, 24, 2018
4DQ7
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BU of 4dq7 by Molmil
Structural Investigation of Bacteriophage Phi6 Lysin (V207F mutant)
Descriptor: Membrane protein Phi6 P5
Authors:Dessau, M.A, Modis, Y.
Deposit date:2012-02-15
Release date:2013-01-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Selective pressure causes an RNA virus to trade reproductive fitness for increased structural and thermal stability of a viral enzyme.
PLoS Genet, 8, 2012
4DIN
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BU of 4din by Molmil
Novel Localization and Quaternary Structure of the PKA RI beta Holoenzyme
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Ilouz, R, Bubis, J, Wu, J, Yim, Y.Y, Deal, M.S, Kornev, A.P, Ma, Y, Blumenthal, D.K, Taylor, S.S.
Deposit date:2012-01-31
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Localization and quaternary structure of the PKA RI Beta holoenzyme
Proc.Natl.Acad.Sci.USA, 109, 2012
3BMB
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BU of 3bmb by Molmil
Crystal structure of a new RNA polymerase interacting protein
Descriptor: CHLORIDE ION, Regulator of nucleoside diphosphate kinase, SULFATE ION
Authors:Darst, S.A, Lamour, V.
Deposit date:2007-12-12
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein.
J.Mol.Biol., 383, 2008
2HOJ
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BU of 2hoj by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions
Descriptor: MAGNESIUM ION, MANGANESE (II) ION, THIAMINE DIPHOSPHATE, ...
Authors:Edwards, T.E, Ferre-D'Amare, A.R.
Deposit date:2006-07-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOP
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BU of 2hop by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to pyrithiamine
Descriptor: 1-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-3-(2-HYDROXYETHYL)-2-METHYLPYRIDINIUM, CALCIUM ION, MAGNESIUM ION, ...
Authors:Edwards, T.E, Ferre-D'Amare, A.R.
Deposit date:2006-07-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOO
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BU of 2hoo by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine
Descriptor: CALCIUM ION, S-BENZOYLTHIAMINE O-MONOPHOSPHATE, thi-box riboswitch
Authors:Edwards, T.E, Ferre-D'Amare, A.R.
Deposit date:2006-07-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
3BOR
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BU of 3bor by Molmil
Crystal structure of the DEADc domain of human translation initiation factor 4A-2
Descriptor: Human initiation factor 4A-II
Authors:Dimov, S, Hong, B, Tempel, W, MacKenzie, F, Karlberg, T, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2007-12-17
Release date:2008-01-01
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
2HOK
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BU of 2hok by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ions
Descriptor: CALCIUM ION, THIAMINE DIPHOSPHATE, thi-box riboswitch
Authors:Edwards, T.E, Ferre-D'Amare, A.R.
Deposit date:2006-07-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOM
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BU of 2hom by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphate
Descriptor: CALCIUM ION, MAGNESIUM ION, THIAMIN PHOSPHATE, ...
Authors:Edwards, T.E, Ferre-D'Amare, A.R.
Deposit date:2006-07-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
2HOL
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BU of 2hol by Molmil
Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ions
Descriptor: BARIUM ION, CALCIUM ION, MAGNESIUM ION, ...
Authors:Edwards, T.E, Ferre-D'Amare, A.R.
Deposit date:2006-07-14
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structures of the Thi-Box Riboswitch Bound to Thiamine Pyrophosphate Analogs Reveal Adaptive RNA-Small Molecule Recognition
Structure, 14, 2006
5VM8
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BU of 5vm8 by Molmil
Crystal structure of a Ribosomal RNA small subunit methyltransferase E from Neisseria gonorrhoeae bound to S-adenosyl methionine
Descriptor: Ribosomal RNA small subunit methyltransferase E, S-ADENOSYLMETHIONINE
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-04-26
Release date:2017-05-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a Ribosomal RNA small subunit methyltransferase E from Neisseria gonorrhoeae bound to S-adenosyl methionine
To Be Published
1MV2
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BU of 1mv2 by Molmil
The tandem, Face-to-Face AP Pairs in 5'(rGGCAPGCCU)2
Descriptor: 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3'
Authors:Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H.
Deposit date:2002-09-24
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002
1MV6
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BU of 1mv6 by Molmil
The tandem, Sheared PP Pairs in 5'(rGGCPPGCCU)2
Descriptor: 5'-R(*GP*GP*CP*(P5P)P*(P5P)P*GP*CP*CP*U)-3'
Authors:Znosko, B.M, Burkard, M.E, Krugh, T.R, Turner, D.H.
Deposit date:2002-09-24
Release date:2002-12-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Molecular Recognition in Purine-Rich Internal Loops: Thermodynamic, Structural, and Dynamic Consequences of Purine for Adenine Substitutions in 5'(rGGCAAGCCU)2
Biochemistry, 41, 2002

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