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2GDE
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BU of 2gde by Molmil
Thrombin in complex with inhibitor
Descriptor: (R)-3-((2S,3R)-1-((2S,3AR,5S,6S,7AS)-2-(2-(1-CARBAMIMIDOYL-2,5-DIHYDRO-1H-PYRROL-3-YL)ETHYLCARBAMOYL)-5,6-DIHYDROXYOCTAHYDRO-1H-INDOL-1-YL)-3-CHLORO-4-METHYL-1-OXOPENTAN-2-YLAMINO)-2-METHOXY-3-OXOPROPYL HYDROGEN SULFATE, Hirudin, SODIUM ION, ...
Authors:Xue, Y.
Deposit date:2006-03-16
Release date:2007-03-20
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Total synthesis and structural confirmation of chlorodysinosin A.
J.Am.Chem.Soc., 128, 2006
2GG5
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BU of 2gg5 by Molmil
Novel bacterial methionine aminopeptidase inhibitors
Descriptor: 5-IMINO-4-(2-TRIFLUOROMETHYL-PHENYLAZO)-5H-PYRAZOL-3-YLAMINE, COBALT (II) ION, Methionine aminopeptidase, ...
Authors:Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M.
Deposit date:2006-03-23
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
Proteins, 66, 2007
2GG9
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BU of 2gg9 by Molmil
Novel bacterial methionine aminopeptidase inhibitors
Descriptor: COBALT (II) ION, METHYL N-[(2S,3R)-3-AMINO-2-HYDROXY-3-(4-ISOPROPYLPHENYL)PROPANOYL]-D-ALANYL-D-LEUCINATE, Methionine aminopeptidase, ...
Authors:Evdokimov, A.G, Pokross, M.E, Walter, R.L, Mekel, M.
Deposit date:2006-03-23
Release date:2006-06-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
Proteins, 66, 2007
2GKP
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BU of 2gkp by Molmil
Protein of Unknown Function NMB0488 from Neisseria meningitidis
Descriptor: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, SODIUM ION, ...
Authors:Osipiuk, J, Volkart, L, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-04-03
Release date:2006-05-02
Last modified:2021-03-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:X-ray crystal structure of hypothetical protein NMB0488 from Neisseria meningitidis.
To be Published
2GL3
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BU of 2gl3 by Molmil
Crystal structure of Mycobacterium tuberculosis trHbN, TyrB10Phe GlnE11Val mutant
Descriptor: CYANIDE ION, Hemoglobin-like protein HbN, PHOSPHATE ION, ...
Authors:Milani, M, Bolognesi, M.
Deposit date:2006-04-04
Release date:2006-09-19
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Ligand interactions in the distal heme pocket of Mycobacterium tuberculosis truncated hemoglobin N: roles of TyrB10 and GlnE11 residues
Biochemistry, 45, 2006
2GVK
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BU of 2gvk by Molmil
Crystal structure of a dye-decolorizing peroxidase (DyP) from Bacteroides thetaiotaomicron VPI-5482 at 1.6 A resolution
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-05-02
Release date:2006-05-16
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif.
Proteins, 69, 2007
2HC9
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BU of 2hc9 by Molmil
Structure of Caenorhabditis elegans leucine aminopeptidase-zinc complex (LAP1)
Descriptor: BICARBONATE ION, GLYCEROL, Leucine aminopeptidase 1, ...
Authors:Zhan, C, Patskovsky, Y, Wengerter, B.C, Ramagopal, U, Milstein, S, Vidal, M, Almo, S.C, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-06-15
Release date:2006-08-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure and Function of Caenorhabditis Elegans Leucine Aminopeptidase
To be Published
2GJR
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BU of 2gjr by Molmil
Structure of bacillus halmapalus alpha-amylase without any substrate analogues
Descriptor: ACETATE ION, CALCIUM ION, SODIUM ION, ...
Authors:Lyhne-Iversen, L, Hobley, T.J, Kaasgaard, S.G, Harris, P.
Deposit date:2006-03-31
Release date:2006-09-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of Bacillus halmapalus alpha-amylase crystallized with and without the substrate analogue acarbose and maltose.
Acta Crystallogr.,Sect.F, 62, 2006
2H4V
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BU of 2h4v by Molmil
Crystal Structure of the Human Tyrosine Receptor Phosphatase Gamma
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Ugochukwu, E, Barr, A, Das, S, Eswaran, J, Savitsky, P, Sundstrom, M, Edwards, A, Arrowsmith, C, Weigelt, J, Debreczeni, J, von Delft, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2006-05-25
Release date:2006-07-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Large-scale structural analysis of the classical human protein tyrosine phosphatome.
Cell(Cambridge,Mass.), 136, 2009
2GKO
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BU of 2gko by Molmil
S41 Psychrophilic Protease
Descriptor: CALCIUM ION, SODIUM ION, microbial serine proteinases; subtilisin, ...
Authors:Walter, R.L, Mekel, M.J, Grayling, R.A, Arnold, F.H, Wintrode, P.L, Almog, O.
Deposit date:2006-04-03
Release date:2007-05-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The crystal structures of the psychrophilic subtilisin S41 and the mesophilic subtilisin Sph reveal the same calcium-loaded state.
Proteins, 74, 2009
2GN1
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BU of 2gn1 by Molmil
Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 2.2A resolution (Triclinic form with one dimer of TdcB in the asymmetric unit)
Descriptor: SODIUM ION, Threonine dehydratase catabolic
Authors:Simanshu, D.K, Savithri, H.S, Murthy, M.R.N.
Deposit date:2006-04-09
Release date:2006-11-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of Salmonella typhimurium biodegradative threonine deaminase and its complex with CMP provide structural insights into ligand-induced oligomerization and enzyme activation.
J.Biol.Chem., 281, 2006
5OK2
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BU of 5ok2 by Molmil
Structure of the D10N mutant of beta-phosphoglucomutase from Lactococcus lactis inhibited with glucose 6-phosphate and tetrafluoroaluminate to 1.1A resolution.
Descriptor: 1,2-ETHANEDIOL, 6-O-phosphono-beta-D-glucopyranose, Beta-phosphoglucomutase, ...
Authors:Robertson, A.J, Bisson, C.
Deposit date:2017-07-25
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:van der Waals Contact between Nucleophile and Transferring Phosphorus Is Insufficient To Achieve Enzyme Transition-State Architecture
Acs Catalysis, 2018
6T89
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BU of 6t89 by Molmil
Thrombin in complex with (S)-N-(tert-butyl)-4-(3-(3-carbamimidoylphenyl)-2-((2',4'-dimethoxy-[1,1'-biphenyl])-3-sulfonamido)propanoyl)piperazine-1-carboxamide (MI-498)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-[(2~{S})-3-(3-carbamimidoylphenyl)-2-[[3-(4-methoxy-2-oxidanyl-phenyl)phenyl]sulfonylamino]propanoyl]-~{N}-methyl-piperazine-1-carboxamide, DIMETHYL SULFOXIDE, ...
Authors:Ngaha, S.A, Sandner, A, Huber, S, Heine, A, Steinmetzer, T, Pilgram, O.
Deposit date:2019-10-24
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Improving the selectivity of 3-amidinophenylalanine-derived matriptase inhibitors
Eur.J.Med.Chem., 2022
6TKL
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BU of 6tkl by Molmil
Non-cleavable tsetse thrombin inhibitor in complex with human alpha-thrombin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Prothrombin, ...
Authors:Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
Deposit date:2019-11-28
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
6GVR
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BU of 6gvr by Molmil
TAILSPIKE PROTEIN MUTANT E372Q (DELTA N471/S472) OF E. COLI BACTERIOPHAGE HK620 IN COMPLEX WITH PENTASACCHARIDE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, SODIUM ION, ...
Authors:Roske, Y, Gohlke, U.
Deposit date:2018-06-21
Release date:2018-07-11
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Solvent Networks Tune Thermodynamics of Oligosaccharide Complex Formation in an Extended Protein Binding Site.
J. Am. Chem. Soc., 140, 2018
5L7I
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BU of 5l7i by Molmil
Structure of human Smoothened in complex with Vismodegib
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-chloranyl-~{N}-(4-chloranyl-3-pyridin-2-yl-phenyl)-4-methylsulfonyl-benzamide, SODIUM ION, ...
Authors:Byrne, E.X.B, Sircar, R, Miller, P.S, Hedger, G, Luchetti, G, Nachtergaele, S, Tully, M.D, Mydock-McGrane, L, Covey, D.F, Rambo, R.F, Sansom, M.S.P, Newstead, S, Rohatgi, R, Siebold, C.
Deposit date:2016-06-03
Release date:2016-07-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of Smoothened regulation by its extracellular domains.
Nature, 535, 2016
6TKI
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BU of 6tki by Molmil
Tsetse thrombin inhibitor in complex with human alpha-thrombin - tetragonal form at 12.7keV
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SODIUM ION, Thrombin heavy chain, ...
Authors:Calisto, B.M, Ripoll-Rozada, J, de Sanctis, D, Pereira, P.J.B.
Deposit date:2019-11-28
Release date:2020-11-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sulfotyrosine-Mediated Recognition of Human Thrombin by a Tsetse Fly Anticoagulant Mimics Physiological Substrates.
Cell Chem Biol, 28, 2021
5OHI
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BU of 5ohi by Molmil
Crystal structure of autotaxin in complex with BI-2545
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15-PENTAOXAHEPTADECANE, CALCIUM ION, ...
Authors:Hoerer, S.
Deposit date:2017-07-17
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Discovery of BI-2545: A Novel Autotaxin Inhibitor That Significantly Reduces LPA Levels in Vivo.
ACS Med Chem Lett, 8, 2017
6T56
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BU of 6t56 by Molmil
Thrombin in Complex with Benzylamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BENZYLAMINE, GLYCEROL, ...
Authors:Ngo, K, Abazi, N, Heine, A, Klebe, G.
Deposit date:2019-10-15
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Thrombin in Complex with Benzylamine
To Be Published
6T99
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BU of 6t99 by Molmil
Crystal structrue of RSL W31YW76Y lectin mutant in complex with alpha-methylfucoside
Descriptor: Fucose-binding lectin protein, SODIUM ION, methyl alpha-L-fucopyranoside
Authors:Houser, J, Kozmon, S, Wimmerova, M.
Deposit date:2019-10-26
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The CH-pi Interaction in Protein-Carbohydrate Binding: Bioinformatics and In Vitro Quantification.
Chemistry, 26, 2020
5OLB
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BU of 5olb by Molmil
crystal structure of autotaxin in complex with PF-8380
Descriptor: (3,5-dichlorophenyl)methyl 4-[3-oxo-3-(2-oxo-2,3-dihydro-1,3-benzoxazol-6-yl)propyl]piperazine-1-carboxylate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Hoerer, S, Lammens, A.
Deposit date:2017-07-27
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Discovery of BI-2545: A Novel Autotaxin Inhibitor That Significantly Reduces LPA Levels in Vivo.
ACS Med Chem Lett, 8, 2017
6GRE
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BU of 6gre by Molmil
Crystal structure of the tandem DUF26 ectodomain from the Arabidopsis thaliana cysteine-rich receptor-like protein PDLP5.
Descriptor: 1,2-ETHANEDIOL, 2-(2-ETHOXYETHOXY)ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brandt, B, Hothorn, M.
Deposit date:2018-06-11
Release date:2018-12-26
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Mechanistic insights into the evolution of DUF26-containing proteins in land plants.
Commun Biol, 2, 2019
5DLW
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BU of 5dlw by Molmil
Crystal structure of Autotaxin (ENPP2) with tauroursodeoxycholic acid (TUDCA) and lysophosphatidic acid (LPA)
Descriptor: (2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate, 2-{[(3alpha,5beta,7alpha,8alpha,14beta,17alpha)-3,7-dihydroxy-24-oxocholan-24-yl]amino}ethanesulfonic acid, CALCIUM ION, ...
Authors:Keune, W.J, Heidebrecht, T, Joosten, R.P, Perrakis, A.
Deposit date:2015-09-07
Release date:2016-04-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Steroid binding to Autotaxin links bile salts and lysophosphatidic acid signalling.
Nat Commun, 7, 2016
5KWS
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BU of 5kws by Molmil
Crystal Structure of Galactose Binding Protein from Yersinia pestis in the Complex with beta D Glucose
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ...
Authors:Kim, Y, Maltseva, N, Mulligan, R, Grimshaw, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-07-19
Release date:2016-08-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.316 Å)
Cite:Crystal Structure of Galactose Binding Protein from Yersinia pestis in the Complex with beta D Glucose
To Be Published
6TSN
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BU of 6tsn by Molmil
Marasmius oreades agglutinin (MOA), papain back.swap W208Q-Q276W variant
Descriptor: 1,2-ETHANEDIOL, Agglutinin, CALCIUM ION, ...
Authors:Cordara, G, Manna, D, Krengel, U.
Deposit date:2019-12-20
Release date:2020-07-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of MOA in complex with a peptide fragment: A protease caught in flagranti .
Curr Res Struct Biol, 2, 2020

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