PDB: 93172 resultsInfo pagesStatus searchChemie searchBIRD

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5X70	Crystal structure of Rice Dwarf Virus P5 in complex with a ssRNA oligomer Descriptor: RNA (5'-R(P*GP*GP*CP*AP*AP*A)-3'), mRNA capping enzyme P5 Authors: Nakamichi, Y, Higashiura, A, Nakagawa, A. Deposit date: 2017-02-23 Release date: 2018-02-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Crystal structure of capping enzyme from Rice dwarf virus To Be Published
5OO3	Cdk2(F80C, C177A) with covalent ligand at F80C Descriptor: 1-(4-ethyl-2,3-dihydroquinoxalin-1-yl)propan-1-one, Cyclin-dependent kinase 2 Authors: Craven, G, Morgan, R.M.L, Mann, D.J. Deposit date: 2017-08-05 Release date: 2018-08-29 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.73 Å) Cite: High-throughput kinetic analysis for target-directed covalent ligand discovery To Be Published
5F64	Putative positive transcription regulator (sensor EvgS) from Shigella flexneri Descriptor: Positive transcription regulator EvgA Authors: Nocek, B, Osipiuk, J, Mulligan, R, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2015-12-05 Release date: 2015-12-30 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.71 Å) Cite: Putative positive transcription regulator (sensor EvgS) from Shigella flexneri. to be published
5X6X	Crystal structure of the capping enzyme P5 from Rice Dwarf Virus Descriptor: 1,2-ETHANEDIOL, mRNA capping enzyme P5 Authors: Nakamichi, Y, Higashiura, A, Nakagawa, A. Deposit date: 2017-02-23 Release date: 2018-02-28 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of the capping enzyme P5 from Rice Dwarf Virus To Be Published
4XDT	Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, a bifunctional FMN transferase/FAD pyrophosphatase, N55Y mutant, FAD bound form Descriptor: 1,2-ETHANEDIOL, ACETATE ION, FAD:protein FMN transferase, ... Authors: Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V. Deposit date: 2014-12-19 Release date: 2015-10-14 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.452 Å) Cite: Evidence for Posttranslational Protein Flavinylation in the Syphilis Spirochete Treponema pallidum: Structural and Biochemical Insights from the Catalytic Core of a Periplasmic Flavin-Trafficking Protein. Mbio, 6, 2015
5X9S	Crystal structure of fully modified H-Ras-GppNHp Descriptor: CALCIUM ION, GTPase HRas, MAGNESIUM ION, ... Authors: Matsumoto, S, Ke, H, Murashima, Y, Taniguchi-Tamura, H, Miyamoto, R, Yoshikawa, Y, Kumasaka, T, Mizohata, E, Edamatsu, H, Kataoka, T. Deposit date: 2017-03-09 Release date: 2017-08-30 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for intramolecular interaction of post-translationally modified H-RasGTP prepared by protein ligation FEBS Lett., 591, 2017
5XFA	Crystal structure of NAD+-reducing [NiFe]-hydrogenase in the H2-reduced state Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, ... Authors: Shomura, Y, Taketa, M, Nakashima, H, Tai, H, Nakagawa, H, Ikeda, Y, Ishii, M, Igarashi, Y, Nishihara, H, Yoon, K.S, Ogo, S, Hirota, S, Higuchi, Y. Deposit date: 2017-04-09 Release date: 2017-08-23 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural basis of the redox switches in the NAD(+)-reducing soluble [NiFe]-hydrogenase Science, 357, 2017
3UA7	Crystal Structure of the Human Fyn SH3 domain in complex with a peptide from the Hepatitis C virus NS5A-protein Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ... Authors: Martin-Garcia, J.M, Ruiz-Sanz, J, Luque, I, Camara-Artigas, A. Deposit date: 2011-10-21 Release date: 2012-07-25 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The promiscuous binding of the Fyn SH3 domain to a peptide from the NS5A protein. Acta Crystallogr.,Sect.D, 68, 2012
5X6Z	Crystal structure of Rice Dwarf Virus P5 in complex with GTP and GDP Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, mRNA capping enzyme P5 Authors: Nakamichi, Y, Higashiura, A, Nakagawa, A. Deposit date: 2017-02-23 Release date: 2018-02-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of the capping enzyme P5 from Rice Dwarf Virus To Be Published
4C7W	Crystal structure of Mouse Hepatitis virus strain S Hemagglutinin- esterase in complex with 4-O-acetylated sialic acid Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... Authors: Zeng, Q.H, Huizinga, E.G. Deposit date: 2013-09-26 Release date: 2013-10-16 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: The Murine Coronavirus Hemagglutinin-Esterase Receptor-Binding Site: A Major Shift in Ligand Specificity Through Modest Changes in Architecture. Plos Pathog., 8, 2012
4XDU	Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein,a bifunctional FMN transferase/FAD pyrophosphatase, N55Y mutant, ADP bound form Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, ... Authors: Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V. Deposit date: 2014-12-20 Release date: 2015-10-14 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Evidence for Posttranslational Protein Flavinylation in the Syphilis Spirochete Treponema pallidum: Structural and Biochemical Insights from the Catalytic Core of a Periplasmic Flavin-Trafficking Protein. Mbio, 6, 2015
3OLL	Crystal structure of phosphorylated estrogen receptor beta ligand binding domain Descriptor: ESTRADIOL, Estrogen receptor beta, Nuclear receptor coactivator 1 Authors: Moecklinghoff, S, Rose, R, Ottmann, C, Brunsveld, L. Deposit date: 2010-08-26 Release date: 2010-11-17 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Synthesis and crystal structure of a phosphorylated estrogen receptor ligand binding domain. Chembiochem, 11, 2010
4XQR	Crystal structure of unliganded human FPPS at 2.15 angstrom resolution Descriptor: Farnesyl pyrophosphate synthase, PHOSPHATE ION Authors: Park, J, Berghuis, A.M. Deposit date: 2015-01-20 Release date: 2016-01-20 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structure of unliganded human FPPS at 2.15 angstrom resolution To Be Published
4XGX	Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase, Y60N mutant, ADP-inhibited Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FAD:protein FMN transferase, ... Authors: Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V. Deposit date: 2015-01-02 Release date: 2015-12-16 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm. Microbiologyopen, 5, 2016
4XDR	Crystal structure of Treponema pallidum TP0796 Flavin trafficking protein, a bifunctional FMN transferase/FAD pyrophosphatase, D284A mutant, ADN bound form Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ADENOSINE, ... Authors: Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V. Deposit date: 2014-12-19 Release date: 2015-10-14 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Evidence for Posttranslational Protein Flavinylation in the Syphilis Spirochete Treponema pallidum: Structural and Biochemical Insights from the Catalytic Core of a Periplasmic Flavin-Trafficking Protein. Mbio, 6, 2015
4NSS	A structural and functional investigation of a novel protein from Mycobacterium smegmatis implicated in mycobacterial macrophage survivability Descriptor: GLYCEROL, Mycobacterial protein Authors: Shahine, A.E, Littler, D, Brammananath, R, Chan, P.Y, Crellin, P.K, Coppel, R.L, Rossjohn, J, Beddoe, T. Deposit date: 2013-11-28 Release date: 2014-09-10 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: A structural and functional investigation of a novel protein from Mycobacterium smegmatis implicated in mycobacterial macrophage survivability. Acta Crystallogr.,Sect.D, 70, 2014
5X6Y	Crystal structure of Rice Dwarf Virus P5 in complex with S-adenosylmethionine Descriptor: 1,2-ETHANEDIOL, CITRATE ANION, S-ADENOSYLMETHIONINE, ... Authors: Nakamichi, Y, Higashiura, A, Nakagawa, A. Deposit date: 2017-02-23 Release date: 2018-02-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Crystal structure of the capping enzyme P5 from Rice Dwarf Virus To Be Published
5FFY	Crystal structure of the bromodomain of human BRPF1 in complex with a benzimidazole ligand Descriptor: 4-ethyl-~{N}-(6-methoxy-1,3-dimethyl-2-oxidanylidene-benzimidazol-5-yl)benzenesulfonamide, Peregrin Authors: Tallant, C, Savitsky, P, Nunez-Alonso, G, Kopec, J, Fedorov, O, Filippakopoulos, P, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S. Deposit date: 2015-12-19 Release date: 2015-12-30 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal structure of the bromodomain of human BRPF1 in complex with a benzimidazole ligand To Be Published
4XGW	Crystal structure of Escherichia coli Flavin trafficking protein, an FMN transferase, E169K mutant Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, FAD:protein FMN transferase, ... Authors: Tomchick, D.R, Brautigam, C.A, Deka, R.K, Norgard, M.V. Deposit date: 2015-01-02 Release date: 2015-12-16 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.747 Å) Cite: Molecular insights into the enzymatic diversity of flavin-trafficking protein (Ftp; formerly ApbE) in flavoprotein biogenesis in the bacterial periplasm. Microbiologyopen, 5, 2016
4R88	Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine Descriptor: 1,2-ETHANEDIOL, 5-fluorocytosine, ACETIC ACID, ... Authors: Fedorov, A.A, Fedorov, E.V, Hitchcock, D.S, Raushel, F.M, Almo, S.C. Deposit date: 2014-08-29 Release date: 2014-09-17 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.952 Å) Cite: Crystal structure of 5-methylcytosine deaminase from Klebsiella pneumoniae liganded with 5-fluorocytosine To be Published
3UG0	Crystal structure of a Trp-less green fluorescent protein translated by the simplified genetic code Descriptor: Green fluorescent protein Authors: Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D. Deposit date: 2011-11-02 Release date: 2012-10-17 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.093 Å) Cite: Simplification of the genetic code: restricted diversity of genetically encoded amino acids. Nucleic Acids Res., 40, 2012
5X71	Crystal structure of Rice Dwarf Virus P5 in space group P212121 Descriptor: GUANOSINE-5'-MONOPHOSPHATE, mRNA capping enzyme P5 Authors: Nakamichi, Y, Higashiura, A, Nakagawa, A. Deposit date: 2017-02-23 Release date: 2018-02-28 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.568 Å) Cite: Crystal structure of the capping enzyme P5 from Rice Dwarf Virus To Be Published
3HFS	Structure of apo anthocyanidin reductase from vitis vinifera Descriptor: Anthocyanidin reductase, CHLORIDE ION Authors: Gargouri, M, Mauge, C, Langlois d'Estaintot, B, Granier, T, Manigan, C, Gallois, B. Deposit date: 2009-05-12 Release date: 2009-09-01 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.17 Å) Cite: Structure and epimerase activity of anthocyanidin reductase from Vitis vinifera. Acta Crystallogr.,Sect.D, 65, 2009
3PO9	Crystal structure of PPARgamma ligand binding domain in complex with tripropyltin Descriptor: 1-[chloro(dipropyl)-lambda~4~-sulfanyl]propane, Peroxisome proliferator-activated receptor gamma, S-1,2-PROPANEDIOL Authors: le Maire, A, Bourguet, W. Deposit date: 2010-11-22 Release date: 2011-11-23 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Crystal structure of PPARgamma ligand binding domain in complex with tripropyltin To be Published
7D5G	Crystal structure of the CsCE with ligand to have a insight into the catalytic mechanism Descriptor: CHLORIDE ION, Cellobiose 2-epimerase, beta-D-glucopyranose-(1-4)-beta-D-fructofuranose Authors: Yang, R.J, Feng, Y.H, Andrew, J.F. Deposit date: 2020-09-25 Release date: 2021-12-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Crystal structure of the CsCE with ligand to have a insight into the catalytic mechanism To Be Published

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