PDB: 222415 resultsInfo pagesStatus searchChemie searchBIRD

---

7LNB	X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 2 (merged) Descriptor: L(+)-TARTARIC ACID, Thaumatin I Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-06 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.22 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
7LPT	X-ray radiation damage series on Proteinase K at 277K, crystal structure, dataset 4 Descriptor: CALCIUM ION, Proteinase K, SULFATE ION Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-12 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.43 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
4TXA	Crystal structure of N-terminus of Roquin Descriptor: Roquin-1, ZINC ION Authors: Kershaw, N.J, Vinuesa, C.G, Babon, J.J. Deposit date: 2014-07-03 Release date: 2015-03-11 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.75 Å) Cite: N/A To Be Published
5KFS	Human DNA polymerase eta R61A-DNA ternary complex: ground state at pH7.0 (K+ MES) with 1 Ca2+ ion Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-29 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
7LQC	X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 4 (merged) Descriptor: CALCIUM ION, Proteinase K, SULFATE ION Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-13 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.02 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
5KG3	Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Mn2+ for 60s Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
7LQB	X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 3 (merged) Descriptor: CALCIUM ION, Proteinase K, SULFATE ION Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-13 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.02 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
7LOR	X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 3 Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-10 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.52 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
7LK6	X-ray radiation damage series on Thaumatin at 277K, multi-conformer model, dataset 4 Descriptor: L(+)-TARTARIC ACID, Thaumatin I Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-01 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
6QNB	Liquid Application Method for time-resolved Analyses (LAMA) by serial synchrotron crystallography, Lysozyme with GlcNAc3 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysozyme C Authors: Mehrabi, P, Schulz, E.C, Miller, R.J.D. Deposit date: 2019-02-10 Release date: 2019-10-02 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Liquid application method for time-resolved analyses by serial synchrotron crystallography. Nat.Methods, 16, 2019
7LP6	X-ray radiation damage series on Lysozyme at 277K, multi-conformer model, dataset 2 (merged) Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-11 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.13 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
7LQ8	X-ray radiation damage series on Proteinase K at 277K, multi-conformer model, dataset 3 Descriptor: CALCIUM ION, Proteinase K, SULFATE ION Authors: Yabukarski, F, Doukov, T, Herschlag, D. Deposit date: 2021-02-13 Release date: 2022-02-23 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals. Acta Crystallogr D Struct Biol, 78, 2022
7LRB	Ni-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Ni(II) (M1) and Cu(II) (M2) Descriptor: COBALT (II) ION, HEME C, Soluble cytochrome b562 Authors: Choi, T.S, Tezcan, F.A. Deposit date: 2021-02-16 Release date: 2022-02-23 Last modified: 2024-04-17 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Overcoming universal restrictions on metal selectivity by protein design. Nature, 603, 2022
7LV4	Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2 - H97A, crystallized in the presence of Cu(II) Descriptor: CALCIUM ION, COPPER (II) ION, HEME C, ... Authors: Choi, T.S, Tezcan, F.A. Deposit date: 2021-02-23 Release date: 2022-03-02 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structure-guided metal selectivity in malleable protein interface mediated by single disulfide bond To Be Published
5KFF	Human DNA polymerase eta-DNA ternary complex: reaction with 1 mM Mn2+ for 1800s Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
5KFQ	Human DNA polymerase eta-DNA ternary complex with Sp-dATP-alpha-S: reaction with 10 mM Mn2+ for 600s Descriptor: 2'-DEOXYADENOSINE 5'-O-(1-THIOTRIPHOSPHATE), CALCIUM ION, DIPHOSPHATE, ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-29 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
7LV1	Cu-bound crystal structure of the engineered cyt cb562 variant, DiCyt2, crystallized in the presence of Cu(II) Descriptor: CALCIUM ION, COPPER (II) ION, HEME C, ... Authors: Choi, T.S, Tezcan, F.A. Deposit date: 2021-02-23 Release date: 2022-03-02 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.91 Å) Cite: Overcoming universal restrictions on metal selectivity by protein design. Nature, 603, 2022
5KG2	Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 5 mM Mn2+ for 60s at 37 degree Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
6KMR	Crystal structure of human N6amt1-Trm112 in complex with SAM (space group P6122) Descriptor: 1,2-ETHANEDIOL, Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein, ... Authors: Li, W.J, Shi, Y, Zhang, T.L, Ye, J, Ding, J.P. Deposit date: 2019-08-01 Release date: 2019-09-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural insight into human N6amt1-Trm112 complex functioning as a protein methyltransferase. Cell Discov, 5, 2019
7M0N	The crystal structure of wild type PA endonuclease (A/Vietnam/1203/2004) in complex with Raltegravir Descriptor: GLYCEROL, MANGANESE (II) ION, N-(4-fluorobenzyl)-5-hydroxy-1-methyl-2-(1-methyl-1-{[(5-methyl-1,3,4-oxadiazol-2-yl)carbonyl]amino}ethyl)-6-oxo-1,6-di hydropyrimidine-4-carboxamide, ... Authors: Cuypers, M.G, Slavish, P.J, Yun, M.K, Dubois, R, Rankovic, Z, White, S.W. Deposit date: 2021-03-11 Release date: 2022-03-02 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential. Eur.J.Med.Chem., 247, 2023
5KFI	Human DNA polymerase eta-DNA ternary complex: reaction with 10 mM Mn2+ for 120s Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DIPHOSPHATE, ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-29 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
5KFT	Human DNA polymerase eta R61A-DNA ternary complex: reaction with 1 mM Mg2+ for 40s Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.52 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
7LWE	Crystal structure of the BCL6 BTB domain in complex with OICR-7629 Descriptor: ACETATE ION, B-cell lymphoma 6 protein, CHLORIDE ION, ... Authors: Kuntz, D.A, Prive, G.G. Deposit date: 2021-03-01 Release date: 2022-03-09 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.17 Å) Cite: Discovery of OICR12694: A Novel, Potent, Selective, and Orally Bioavailable BCL6 BTB Inhibitor. Acs Med.Chem.Lett., 14, 2023
5KG5	Human DNA polymerase eta-DNA ternary complex: reaction first with 1 mM Mn2+ for 1800s then with 10 mM Cd2+ for 60s Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*TP*A)-3'), ... Authors: Gao, Y, Yang, W. Deposit date: 2016-06-12 Release date: 2016-06-22 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Capture of a third Mg2+ is essential for catalyzing DNA synthesis. Science, 352, 2016
7RSK	The crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus Descriptor: Glycosyl hydrolase family 2, sugar binding domain protein Authors: Kim, Y, Nocek, B, Endres, M, Joachimiak, G, Johnson, J, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) Deposit date: 2021-08-11 Release date: 2021-08-25 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus To Be Published

<315316317318319320321322323324325326327328329330>