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4K86
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BU of 4k86 by Molmil
Crystal structure of human prolyl-tRNA synthetase (apo form)
Descriptor: Proline--tRNA ligase, ZINC ION
Authors:Hwang, K.Y, Son, J.H, Lee, E.H.
Deposit date:2013-04-18
Release date:2013-10-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational changes in human prolyl-tRNA synthetase upon binding of the substrates proline and ATP and the inhibitor halofuginone.
Acta Crystallogr.,Sect.D, 69, 2013
4K8L
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BU of 4k8l by Molmil
Crystal structure of a putative 4-hydroxyproline epimerase/3-hydroxyproline dehydratse from the soil bacterium ochrobacterium anthropi, target efi-506495, disordered loops
Descriptor: Proline racemase
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Washington, E, Scott Glen, A, Chowdhury, S, Evens, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-04-18
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a putative 4-hydroxyproline epimerase/3-hydroxyproline dehydratse from the soil bacterium ochrobacterium anthropi, target efi-506495, disordered loops
To be Published
9F3E
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BU of 9f3e by Molmil
Single acyclic phosphonate nucleotide (R)-ZNA modification on DNA duplex
Descriptor: C modified (R)-ZNA
Authors:Li, X, Groaz, E, Herdewyn, P, Lescrinier, E.
Deposit date:2024-04-25
Release date:2024-06-05
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:Impact of Single Acyclic Phosphonate Nucleotide (ZNA) Modifications on DNA Duplex Stability.
Chemistry, 30, 2024
9EUU
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BU of 9euu by Molmil
Structure of recombinant alpha-synuclein fibrils 1B capable of seeding GCIs in vivo
Descriptor: Alpha-synuclein
Authors:Burger, D, Kashyrina, M, Lewis, A, De Nuccio, F, Mohammed, I, de La Seigliere, H, van den Heuvel, L, Feuillie, C, Verchere, J, Berbon, M, Arotcarena, M, Retailleau, A, Bezard, E, Laferriere, F, Loquet, A, Bousset, L, Baron, T, Lofrumento, D.D, De Giorgi, F, Stahlberg, H, Ichas, F.
Deposit date:2024-03-28
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (1.93 Å)
Cite:Multiple System Atrophy: Insights from aSyn Fibril Structure
To Be Published
9FQ2
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BU of 9fq2 by Molmil
Poliovirus 3C protease in H32 spacegroup
Descriptor: Protease 3C
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Poliovirus 3C protease in H32 spacegroup
To Be Published
9IIX
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BU of 9iix by Molmil
A Cryo-EM structure of Bitter taste receptor TAS2R14 with Ggust
Descriptor: 4-methyl-N-[(2M)-2-(1H-tetrazol-5-yl)phenyl]-6-(trifluoromethyl)pyrimidin-2-amine, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yuan, Q, Duan, J, Tao, L, Xu, E.H.
Deposit date:2024-06-21
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Bitter taste receptor TAS2R14 activation and G protein assembly by an intracellular agonist.
Cell Res., 2024
8ZJE
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BU of 8zje by Molmil
Cryo-EM structure of kisspeptin receptor bound to TAK-448
Descriptor: ACY-DTY-HYP-ASN-THR-PHE-XZA-LEU-NMM-TRP-NH2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Shen, S, Liu, H, Xu, H.E.
Deposit date:2024-05-14
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Cryo-EM structure of kisspeptin receptor bound to TAK-448
To Be Published
6DTM
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BU of 6dtm by Molmil
Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
Descriptor: CHLORIDE ION, Methyl-accepting chemotaxis protein TlpA
Authors:Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
Deposit date:2018-06-17
Release date:2018-09-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
4KI9
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BU of 4ki9 by Molmil
Crystal structure of the catalytic domain of human DUSP12 at 2.0 A resolution
Descriptor: Dual specificity protein phosphatase 12, PHOSPHATE ION
Authors:Jeon, T.J, Chien, P.N, Ku, B, Kim, S.J, Ryu, S.E.
Deposit date:2013-05-02
Release date:2014-02-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The family-wide structure and function of human dual-specificity protein phosphatases
Acta Crystallogr.,Sect.D, 70, 2014
8ZJD
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BU of 8zjd by Molmil
Cryo-EM structure of kisspeptin receptor bound to KP-10
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1,Guanine nucleotide-binding protein G(q) subunit alpha, ...
Authors:Shen, S, Liu, H, Xu, H.E.
Deposit date:2024-05-14
Release date:2024-07-03
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Cryo-EM structure of kisspeptin receptor bound to KP-10
To Be Published
4KJO
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BU of 4kjo by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L36A/V66T/V99T at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2013-05-03
Release date:2013-05-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cavities in proteins
To be Published
4KML
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BU of 4kml by Molmil
Probing the N-terminal beta-sheet conversion in the crystal structure of the full-length human prion protein bound to a Nanobody
Descriptor: Major prion protein, Nanobody
Authors:Abskharon, R.N.N, Giachin, G, Wohlkonig, A, Soror, S.H, Pardon, E, Legname, G, Steyaert, J.
Deposit date:2013-05-08
Release date:2014-02-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Probing the N-Terminal beta-Sheet Conversion in the Crystal Structure of the Human Prion Protein Bound to a Nanobody.
J.Am.Chem.Soc., 136, 2014
4JZQ
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BU of 4jzq by Molmil
Crystal structure of human CLIC1 C24D mutant
Descriptor: Chloride intracellular channel protein 1
Authors:Phang, J.M, Harrop, S.J, Duff, A.P, Wilk, K.E, Curmi, P.M.G.
Deposit date:2013-04-03
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure analysis of CLIC1 C24 mutants
To be Published
4U6S
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BU of 4u6s by Molmil
CtBP1 in complex with substrate phenylpyruvate
Descriptor: 3-PHENYLPYRUVIC ACID, C-terminal-binding protein 1, CALCIUM ION, ...
Authors:Hilbert, B.J, Morris, B.L, Ellis, K.C, Paulsen, J.L, Schiffer, C.A, Grossman, S.R, Royer Jr, W.E.
Deposit date:2014-07-29
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Design of a High Affinity Inhibitor to Human CtBP.
Acs Chem.Biol., 10, 2015
4K0N
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BU of 4k0n by Molmil
Crystal structure of human CLIC1 C24A mutant
Descriptor: Chloride intracellular channel protein 1, MALONATE ION
Authors:Phang, J.M, Harrop, S.J, Duff, A.P, Wilk, K.E, Curmi, P.M.G.
Deposit date:2013-04-04
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure analysis of CLIC1 C24 mutants
To be Published
4KP2
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BU of 4kp2 by Molmil
Crystal structure of homoaconitase large subunit from methanococcus jannaschii (MJ1003)
Descriptor: Homoaconitase large subunit
Authors:Hwang, K.Y, Lee, E.H.
Deposit date:2013-05-13
Release date:2014-04-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.504 Å)
Cite:Structural characterization and comparison of the large subunits of IPM isomerase and homoaconitase from Methanococcus jannaschii
Acta Crystallogr.,Sect.D, 70, 2014
4K23
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BU of 4k23 by Molmil
Structure of anti-uPAR Fab ATN-658
Descriptor: anti-uPAR antibody, heavy chain, light chain
Authors:Yuan, C, Huang, M, Chen, L.
Deposit date:2013-04-08
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Identification of a New Epitope in uPAR as a Target for the Cancer Therapeutic Monoclonal Antibody ATN-658, a Structural Homolog of the uPAR Binding Integrin CD11b ( alpha M)
Plos One, 9, 2014
4U2L
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BU of 4u2l by Molmil
Dithionite reduced cholesterol in complex with sulfite
Descriptor: (S)-10-((2S,3S,4R)-5-((S)-((S)-(((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHOXY)(HYDROXY)PHOSPHORYLOXY)(HYDROXY)PHOSPHORYLOXY)-2,3,4-TRIHYDROXYPENTYL)-7,8-DIMETHYL-2,4-DIOXO-2,3,4,4A-TETRAHYDROBENZO[G]PTERIDINE-5(10H)-SULFONIC ACID, Cholesterol oxidase, SULFATE ION
Authors:Golden, E.A, Vrielink, A.
Deposit date:2014-07-17
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.337 Å)
Cite:High-resolution structures of cholesterol oxidase in the reduced state provide insights into redox stabilization.
Acta Crystallogr.,Sect.D, 70, 2014
4K2B
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BU of 4k2b by Molmil
Crystal structure of ntda from bacillus subtilis in complex with the internal aldimine
Descriptor: NTD biosynthesis operon protein NtdA
Authors:Van Straaten, K.E, Palmer, D.R.J, Sanders, D.A.R.
Deposit date:2013-04-08
Release date:2013-10-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:The Structure of NtdA, a Sugar Aminotransferase Involved in the Kanosamine Biosynthetic Pathway in Bacillus subtilis, Reveals a New Subclass of Aminotransferases.
J.Biol.Chem., 288, 2013
4KEE
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BU of 4kee by Molmil
Crystal Structure of Cofilin Mutant (cof1-158p)
Descriptor: Cofilin
Authors:Kish-Trier, E, Haarer, B, Cingolani, G, Amberg, D.C.
Deposit date:2013-04-25
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.448 Å)
Cite:Crystal Structure of Cofilin Mutant (cof1-158p)
To be Published
4U6T
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BU of 4u6t by Molmil
Crystal structure of the Clostridium histolyticum colH collagenase polycystic kidney disease-like domain 2a at 1.76 Angstrom resolution
Descriptor: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ColH protein
Authors:Bauer, R, Janowska, K, Sakon, J, Matsushita, O, Latimer, E.
Deposit date:2014-07-29
Release date:2015-03-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structures of three polycystic kidney disease-like domains from Clostridium histolyticum collagenases ColG and ColH.
Acta Crystallogr.,Sect.D, 71, 2015
4KJL
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BU of 4kjl by Molmil
Room Temperature N23PPS148A DHFR
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:van den Bedem, H, Bhabha, G, Yang, K, Wright, P.E, Fraser, J.S.
Deposit date:2013-05-03
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Automated identification of functional dynamic contact networks from X-ray crystallography.
Nat.Methods, 10, 2013
4K88
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BU of 4k88 by Molmil
Crystal structure of human prolyl-tRNA synthetase (halofuginone bound form)
Descriptor: 7-bromo-6-chloro-3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, Proline--tRNA ligase, ZINC ION
Authors:Hwang, K.Y, Son, J.H, Lee, E.H.
Deposit date:2013-04-18
Release date:2013-10-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.619 Å)
Cite:Conformational changes in human prolyl-tRNA synthetase upon binding of the substrates proline and ATP and the inhibitor halofuginone.
Acta Crystallogr.,Sect.D, 69, 2013
4KEF
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BU of 4kef by Molmil
Structure of Cofilin Mutant (cof1-159p)
Descriptor: Cofilin
Authors:Kish-Trier, E, Haarer, B, Cingolani, G, Amberg, D.C.
Deposit date:2013-04-25
Release date:2013-05-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.098 Å)
Cite:Structure of Cofilin Mutant (cof1-159p)
To be Published
4UFF
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BU of 4uff by Molmil
Thrombin in complex with (2R)-2-(benzylsulfonylamino)-N-(2-((4- carbamimidoylphenyl)methylamino)-2-oxo-ethyl)-N-methyl-3-phenyl- propanamide
Descriptor: (2R)-2-(benzylsulfonylamino)-N-(2-((4-carbamimidoylphenyl)methylamino)-2-oxo-ethyl)-N-methyl-3-phenyl-propanamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, HIRUDIN VARIANT-2, ...
Authors:Ruehmann, E, Heine, A, Klebe, G.
Deposit date:2015-03-16
Release date:2016-01-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Boosting Affinity by Correct Ligand Preorganization for the S2 Pocket of Thrombin: A Study by Isothermal Titration Calorimetry, Molecular Dynamics, and High-Resolution Crystal Structures.
Chemmedchem, 11, 2016

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