PDB: 925 resultsInfo pagesStatus searchChemie searchBIRD

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2H5P	Crystal structure of mStrawberry at pH 9.5 Descriptor: mStrawberry Authors: Shu, X, Remington, S.J. Deposit date: 2006-05-26 Release date: 2006-08-22 Last modified: 2017-10-18 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Novel Chromophores and Buried Charges Control Color in mFruits Biochemistry, 45, 2006
2G6Y	Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata Descriptor: green fluorescent protein 2 Authors: Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. Deposit date: 2006-02-26 Release date: 2006-03-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
2G2S	Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis Descriptor: Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P. Deposit date: 2006-02-16 Release date: 2006-04-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation. J.Am.Chem.Soc., 128, 2006
2G6X	Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata Descriptor: green fluorescent protein 2 Authors: Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. Deposit date: 2006-02-26 Release date: 2006-03-28 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
2GW3	Crystal structure of stony coral fluorescent protein Kaede, green form Descriptor: Kaede, NICKEL (II) ION Authors: Hayashi, I, Mizuno, H, Miyawaki, A, Ikura, M. Deposit date: 2006-05-03 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic evidence for water-assisted photo-induced peptide cleavage in the stony coral fluorescent protein Kaede. J.Mol.Biol., 372, 2007
2GX2	Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa Descriptor: MAGNESIUM ION, fluorescent protein Dronpa Authors: Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K. Deposit date: 2006-05-08 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S Biochem.Biophys.Res.Commun., 354, 2007
2HJO	Crystal structure of V224H design intermediate for GFP metal ion reporter Descriptor: 1,2-ETHANEDIOL, Green Fluorescent Protein, MAGNESIUM ION Authors: Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-06-30 Release date: 2008-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter To be Published
2HQZ	Crystal structure of L42H design intermediate for GFP metal ion reporter Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION Authors: Barondeau, D.P, Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2006-07-19 Release date: 2008-04-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Iterative Structure-Based Design of a Green Fluorescent Protein Metal Ion Reporter To be Published
3U0L	Crystal structure of the engineered fluorescent protein mRuby, crystal form 1, pH 4.5 Descriptor: ACETATE ION, mRuby Authors: Akerboom, J, Looger, L.L, Schreiter, E.R. Deposit date: 2011-09-28 Release date: 2012-10-03 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
3U0M	Crystal structure of the engineered fluorescent protein mRuby, crystal form 1, pH 8.5 Descriptor: mRuby Authors: Akerboom, J, Looger, L.L, Schreiter, E.R. Deposit date: 2011-09-28 Release date: 2012-10-03 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics. Front Mol Neurosci, 6, 2013
3SRY	Engineered high-affinity halide-binding protein derived from YFP: halide-free Descriptor: Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-07 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.159 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SVB	Engineered medium-affinity halide-binding protein derived from YFP: fluoride complex Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-12 Release date: 2012-07-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SST	Engineered low-affinity halide-binding protein derived from YFP: chloride complex Descriptor: CHLORIDE ION, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.403 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SVE	Engineered low-affinity halide-binding protein derived from YFP: bromide complex Descriptor: BROMIDE ION, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-12 Release date: 2012-07-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.492 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SV5	Engineered medium-affinity halide-binding protein derived from YFP: iodide complex Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein, ... Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-12 Release date: 2012-07-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation. J.Neurosci., 33, 2013
3ST0	Engineered medium-affinity halide-binding protein derived from YFP: halide-free Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.19 Å) Cite: Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation. J.Neurosci., 33, 2013
3SS0	Engineered high-affinity halide-binding protein derived from YFP: fluoride complex Descriptor: Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-07 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.492 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SSL	Engineered high-affinity halide-binding protein derived from YFP: iodide complex Descriptor: Green fluorescent protein, IODIDE ION Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.449 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be published
3SSH	Engineered high-affinity halide-binding protein derived from YFP: chloride complex Descriptor: CHLORIDE ION, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.277 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SSY	Engineered low-affinity halide-binding protein derived from YFP: iodide complex Descriptor: Green fluorescent protein, IODIDE ION Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.769 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3SVC	Engineered medium-affinity halide-binding protein derived from YFP: chloride complex Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-12 Release date: 2012-07-18 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.31 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3UG0	Crystal structure of a Trp-less green fluorescent protein translated by the simplified genetic code Descriptor: Green fluorescent protein Authors: Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D. Deposit date: 2011-11-02 Release date: 2012-10-17 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.093 Å) Cite: Simplification of the genetic code: restricted diversity of genetically encoded amino acids. Nucleic Acids Res., 40, 2012
3SSK	Engineered high-affinity halide-binding protein derived from YFP: bromide complex Descriptor: BROMIDE ION, Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.361 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published
3VIC	Green-fluorescent variant of the non-fluorescent chromoprotein Rtms5 Descriptor: CHLORIDE ION, GFP-like non-fluorescent chromoprotein, IODIDE ION Authors: Battad, J.M, Traore, D.A.K, Byres, E, Wilce, M, Devenish, R.J, Rossjohn, J, Prescott, M. Deposit date: 2011-09-28 Release date: 2012-06-06 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: A Green Fluorescent Protein Containing a QFG Tri-Peptide Chromophore: Optical Properties and X-Ray Crystal Structure. Plos One, 7, 2012
3SSP	Engineered low-affinity halide-binding protein derived from YFP: halide-free Descriptor: Green fluorescent protein Authors: Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W. Deposit date: 2011-07-08 Release date: 2012-07-11 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.628 Å) Cite: Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition To be Published

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