PDB: 72372 resultsInfo pagesStatus searchChemie searchBIRD

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8VC5	Crystal structure of glutamyl-tRNA synthetase GluRS from Pseudomonas aeruginosa (Zinc bound) Descriptor: CITRATE ANION, GLYCEROL, Glutamate--tRNA ligase, ... Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2023-12-13 Release date: 2023-12-27 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of glutamyl-tRNA synthetase GluRS from Pseudomonas aeruginosa (Zinc bound) To be published
8RGK	Structure of Human Serum Albumin in complex with Aristolochic Acid at 1.9 A resolution Descriptor: 1,2-ETHANEDIOL, 8-methoxy-6-nitro-naphtho[1,2-e][1,3]benzodioxole-5-carboxylic acid, MYRISTIC ACID, ... Authors: Pomyalov, S, Sidorenko, V.S, Grollman, A.P, Shoham, G. Deposit date: 2023-12-13 Release date: 2024-06-26 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural and mechanistic insights into the transport of aristolochic acids and their active metabolites by human serum albumin. J.Biol.Chem., 300, 2024
8RGL	Structure of Human Serum Albumin in complex with Aristolochic Acid I at 1.9 A resolution - Optimized Descriptor: 1,2-ETHANEDIOL, 8-methoxy-6-nitro-naphtho[1,2-e][1,3]benzodioxole-5-carboxylic acid, MYRISTIC ACID, ... Authors: Pomyalov, S, Sidorenko, V.S, Grollman, A.P, Shoham, G. Deposit date: 2023-12-13 Release date: 2024-06-26 Last modified: 2024-07-03 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural and mechanistic insights into the transport of aristolochic acids and their active metabolites by human serum albumin. J.Biol.Chem., 300, 2024
8RFM	Human NOQ1 enzyme in complex with NADH by serial crystallography Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE Authors: Martin-Garcia, J.M, Grieco, A, Medina, M, Boneta, S, Pey, A.L. Deposit date: 2023-12-13 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural dynamics and functional cooperativity of human NQO1 by ambient temperature serial crystallography and simulations. Protein Sci., 33, 2024
8RFN	Human NOQ1 enzyme in its holo form by serial crystallography Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H dehydrogenase [quinone] 1 Authors: Martin-Garcia, J.M, Grieco, A, Medina, M, Boneta, S, Pey, A.L. Deposit date: 2023-12-13 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural dynamics and functional cooperativity of human NQO1 by ambient temperature serial crystallography and simulations. Protein Sci., 33, 2024
8XEG	Cryo-EM structure of Adeno-associated Virus 9P31 in 1.76 angstrom. Descriptor: Capsid protein VP1 Authors: Zhang, R, Liu, Y, Lou, Z. Deposit date: 2023-12-12 Release date: 2024-01-24 Last modified: 2024-02-28 Method: ELECTRON MICROSCOPY (1.76 Å) Cite: Structural basis of the recognition of adeno-associated virus by the neurological system-related receptor carbonic anhydrase IV. Plos Pathog., 20, 2024
8REV	Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent DNA helicase CHL1, DNA (46-MER), ... Authors: Kuper, J, Hove, T, Kisker, C. Deposit date: 2023-12-12 Release date: 2024-05-29 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: XPD stalled on cross-linked DNA provides insight into damage verification. Nat.Struct.Mol.Biol., 2024
8VAW	Magnesium catalyzed primer extension product with 14mer primer and mixed phosphorothioate activated G monomer Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, Magnesium catalyzed nonenzymatic RNA primer extension product Authors: Fang, Z, Szostak, J.W. Deposit date: 2023-12-11 Release date: 2024-04-17 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension. J.Am.Chem.Soc., 146, 2024
8VAP	Structure of the E. coli clamp loader bound to the beta clamp in a Fully-Open conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAR	Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA2 conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAL	Structure of the E. coli clamp loader bound to the beta clamp in a Open-DNAp/t conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAQ	Structure of the E. coli clamp loader bound to the beta clamp in a Closed-DNA1 conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAC	Cryogenic electron microscopy structure of human serum albumin in complex with teniposide Descriptor: (5S,5aR,8aR,9R)-9-(4-hydroxy-3,5-dimethoxyphenyl)-8-oxo-5,5a,6,8,8a,9-hexahydrofuro[3',4':6,7]naphtho[2,3-d][1,3]dioxol -5-yl 4,6-O-(thiophen-2-ylmethylidene)-beta-D-glucopyranoside, Serum albumin Authors: Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G. Deposit date: 2023-12-11 Release date: 2024-06-26 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: The CryoEM structure of human serum albumin in complex with ligands. J.Struct.Biol., 216, 2024
8VAS	Structure of the E. coli clamp loader bound to the beta clamp in an Altered-Collar conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAE	Cryogenic electron microscopy structure of human serum albumin in complex with salicylic acid Descriptor: 2-HYDROXYBENZOIC ACID, Serum albumin Authors: Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G. Deposit date: 2023-12-11 Release date: 2024-06-26 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: The CryoEM structure of human serum albumin in complex with ligands. J.Struct.Biol., 216, 2024
8VAF	Cryogenic electron microscopy structure of apo human serum albumin Descriptor: Serum albumin Authors: Catalano, C, Lucier, K.W, To, D, Senko, S, Tran, N.L, Farwell, A.C, Silva, S.M, Dip, P.V, Poweleit, N, Scapin, G. Deposit date: 2023-12-11 Release date: 2024-06-26 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: The CryoEM structure of human serum albumin in complex with ligands. J.Struct.Biol., 216, 2024
8VAN	Structure of the E. coli clamp loader bound to the beta clamp in an Initial-Binding conformation Descriptor: Beta sliding clamp, DNA polymerase III subunit delta, DNA polymerase III subunit delta', ... Authors: Landeck, J.T, Pajak, J, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (7.7 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAT	Structure of the E. coli clamp loader bound to the beta clamp in a Open-RNAp/t conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAM	Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ... Authors: Landeck, J.T, Kelch, B.A. Deposit date: 2023-12-11 Release date: 2024-03-27 Last modified: 2024-05-01 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication. J.Biol.Chem., 300, 2024
8VAX	Cadmium catalyzed primer extension product with 14mer primer and mixed phosphorothioate activated G monomer Descriptor: 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE, Cadmium catalyzed nonenzymatic RNA primer extension product, MAGNESIUM ION Authors: Fang, Z, Szostak, J.W. Deposit date: 2023-12-11 Release date: 2024-04-17 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.417 Å) Cite: Catalytic Metal Ion-Substrate Coordination during Nonenzymatic RNA Primer Extension. J.Am.Chem.Soc., 146, 2024
8REF	Crystal structure of HLA B*13:01 in complex with SVLNDILARL, an 10-mer epitope from SARS-CoV-2 Spike (S975-984) Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ... Authors: Ahn, Y.M, Maddumage, J.C, Szeto, C, Gras, S. Deposit date: 2023-12-11 Release date: 2024-05-15 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: The impact of SARS-CoV-2 spike mutation on peptide presentation is HLA allomorph-specific. Curr Res Struct Biol, 7, 2024
8VA2	Symmetry expanded map of 2 gamma-tubulins bound to 2 alpha tubulins in gamma tubulin ring complex capped microtubule end. Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Aher, A, Urnavicius, L, Kapoor, T.M. Deposit date: 2023-12-10 Release date: 2024-03-27 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Symmetry expanded map of 2 gamma-tubulins bound to 2 alpha tubulins. To Be Published
8RE4	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 5nt pre-translocated complex Descriptor: DNA (47-MER), DNA (50-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8RED	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 8nt complex Descriptor: DNA (46-MER), DNA (51-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024
8REE	Cryo-EM structure of bacterial RNA polymerase-sigma54 initial transcribing complex - 9nt complex Descriptor: DNA (45-MER), DNA (49-MER), DNA-directed RNA polymerase subunit alpha, ... Authors: Gao, F, Zhang, X. Deposit date: 2023-12-10 Release date: 2024-01-17 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural basis of sigma 54 displacement and promoter escape in bacterial transcription. Proc.Natl.Acad.Sci.USA, 121, 2024

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