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7KHR
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BU of 7khr by Molmil
Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, R, Li, X.
Deposit date:2020-10-21
Release date:2021-03-17
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Molecular basis of V-ATPase inhibition by bafilomycin A1.
Nat Commun, 12, 2021
6WLW
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BU of 6wlw by Molmil
The Vo region of human V-ATPase in state 1 (focused refinement)
Descriptor: (2~{S})-2-$l^{4}-azanyl-3-[[(2~{R})-3-octadecanoyloxy-2-oxidanyl-propoxy]-oxidanyl-oxidanylidene-$l^{6}-phosphanyl]oxy-propanoic acid, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, L, Wu, H, Fu, T.-M.
Deposit date:2020-04-20
Release date:2020-11-11
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
6U9D
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BU of 6u9d by Molmil
Saccharomyces cerevisiae acetohydroxyacid synthase
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Acetolactate synthase catalytic subunit, mitochondrial, ...
Authors:Guddat, L.W, Lonhienne, T.
Deposit date:2019-09-08
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.194 Å)
Cite:Structures of fungal and plant acetohydroxyacid synthases.
Nature, 586, 2020
7UW9
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BU of 7uw9 by Molmil
Citrus V-ATPase State 1, H in contact with subunit a
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWB
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BU of 7uwb by Molmil
Citrus V-ATPase State 2, Highest-Resolution Class
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWA
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BU of 7uwa by Molmil
Citrus V-ATPase State 1, H in contact with subunits AB
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Abdelaziz, R.A, Keon, K.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UWC
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BU of 7uwc by Molmil
Citrus V-ATPase State 2, H in contact with subunit a
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit AP1 fragment, V-type proton ATPase subunit AP2 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
7UNF
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BU of 7unf by Molmil
CryoEM structure of a mEAK7 bound human V-ATPase complex
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2022-06-29
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7UWD
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BU of 7uwd by Molmil
Citrus V-ATPase State 2, H in contact with subunits AB
Descriptor: V-type proton ATPase catalytic subunit A, V-type proton ATPase subunit, V-type proton ATPase subunit AP1 fragment, ...
Authors:Keon, K.A, Abdelaziz, R.A, Schulze, W.X, Schumacher, K, Rubinstein, J.L.
Deposit date:2022-05-03
Release date:2022-07-06
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structure of V-ATPase from citrus fruit.
Structure, 30, 2022
6VQ7
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BU of 6vq7 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 2 bound to ADP and SidK (built from focused refinement models)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ6
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BU of 6vq6 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 1 bound to ADP and SidK (built from focused refinement models)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQA
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BU of 6vqa by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with SidK and ADP (from focused refinement)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQ9
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BU of 6vq9 by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 1 with SidK and ADP (from focused refinement)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6VQB
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BU of 6vqb by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with SidK and ADP (from focused refinement)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
7UNE
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BU of 7une by Molmil
The V1 region of bovine V-ATPase in complex with human mEAK7 (focused refinement)
Descriptor: KIAA1609 protein, isoform CRA_a, V-type proton ATPase catalytic subunit A, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
7Z18
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BU of 7z18 by Molmil
E. coli C-P lyase bound to a PhnK ABC dimer and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, ...
Authors:Amstrup, S.K, Sofos, N, Karlsen, J.L, Skjerning, R.B, Boesen, T, Enghild, J.J, Hove-Jensen, B, Brodersen, D.E.
Deposit date:2022-02-24
Release date:2022-05-25
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (1.98 Å)
Cite:Structural remodelling of the carbon-phosphorus lyase machinery by a dual ABC ATPase.
Nat Commun, 14, 2023
8IGU
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BU of 8igu by Molmil
Hexameric Ring Complex of Engineered V1-ATPase: A3(De)3_empty
Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8IGW
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BU of 8igw by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 4 ADPs: A3(De)3_(ADP)3cat,1non-cat, Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP)3cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, V-type sodium ATPase catalytic subunit A, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
6UIA
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BU of 6uia by Molmil
Structure of ATP citrate lyase with CoA in a partially open conformation
Descriptor: ATP-citrate synthase, COENZYME A
Authors:Wei, X, Marmorstein, R.
Deposit date:2019-09-30
Release date:2019-12-25
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Molecular basis for acetyl-CoA production by ATP-citrate lyase.
Nat.Struct.Mol.Biol., 27, 2020
4QYR
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BU of 4qyr by Molmil
Streptomyces platensis isomigrastatin ketosynthase domain MgsE KS3
Descriptor: ACETIC ACID, AT-less polyketide synthase, CHLORIDE ION, ...
Authors:Kim, Y, Li, H, Endres, M, Babnigg, J, Bingman, C.A, Yennamalli, R, Lohman, J.R, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-07-25
Release date:2014-08-20
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.
Proc.Natl.Acad.Sci.USA, 112, 2015
5B0O
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BU of 5b0o by Molmil
Structure of the FliH-FliI complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellar assembly protein FliH, Flagellum-specific ATP synthase
Authors:Imada, K, Uchida, Y, Kinoshita, M, Namba, K, Minamino, T.
Deposit date:2015-11-02
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insight into the flagella type III export revealed by the complex structure of the type III ATPase and its regulator
Proc.Natl.Acad.Sci.USA, 113, 2016
7TMO
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BU of 7tmo by Molmil
V1 complex lacking subunit C from Saccharomyces cerevisiae, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, H(+)-transporting two-sector ATPase, ...
Authors:Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
Deposit date:2022-01-19
Release date:2022-04-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022
3VR2
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BU of 3vr2 by Molmil
Crystal structure of nucleotide-free A3B3 complex from Enterococcus hirae V-ATPase [eA3B3]
Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
Authors:Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR4
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BU of 3vr4 by Molmil
Crystal structure of Enterococcus hirae V1-ATPase [eV1]
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Saijo, S, Arai, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.172 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013
3VR6
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BU of 3vr6 by Molmil
Crystal structure of AMP-PNP bound Enterococcus hirae V1-ATPase [bV1]
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, V-type sodium ATPase catalytic subunit A, ...
Authors:Arai, S, Saijo, S, Suzuki, K, Mizutani, K, Kakinuma, Y, Ishizuka-Katsura, Y, Ohsawa, N, Terada, T, Shirouzu, M, Yokoyama, S, Iwata, S, Yamato, I, Murata, T.
Deposit date:2012-04-03
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Rotation mechanism of Enterococcus hirae V(1)-ATPase based on asymmetric crystal structures
Nature, 493, 2013

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