PDB: 298 resultsInfo pagesStatus searchChemie searchBIRD

---

2JDL	Structure of C-terminal region of acidic P2 ribosomal protein complexed with trichosanthin Descriptor: ACIDIC RIBOSOMAL PROTEIN P2, RIBOSOME-INACTIVATING PROTEIN ALPHA-TRICHOSANTHIN Authors: Too, P.H, Mak, A.N, Zhu, G, Au, S.W, Wong, K.B, Shaw, P.C. Deposit date: 2007-01-11 Release date: 2008-02-05 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: The C-Terminal Fragment of the Ribosomal P Protein Complexed to Trichosanthin Reveals the Interaction between the Ribosome-Inactivating Protein and the Ribosome. Nucleic Acids Res., 37, 2009
6URX	Crystal structure of ricin A chain in complex with inhibitor 5-phenyl-2-thiophenecarboxylic acid Descriptor: 1,2-ETHANEDIOL, 5-phenylthiophene-2-carboxylic acid, DIMETHYL SULFOXIDE, ... Authors: Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L. Deposit date: 2019-10-24 Release date: 2020-06-17 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes. Acs Infect Dis., 6, 2020
6URW	Crystal structure of ricin A chain in complex with inhibitor 4-(2-thienylmethyl)benzoic acid Descriptor: 1,2-ETHANEDIOL, 4-[(thiophen-2-yl)methyl]benzoic acid, DIMETHYL SULFOXIDE, ... Authors: Harijan, R.K, Li, X.P, Bonanno, J.B, Almo, S.C, Tumer, N.E, Schramm, V.L. Deposit date: 2019-10-24 Release date: 2020-06-17 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Small Molecule Inhibitors Targeting the Interaction of Ricin Toxin A Subunit with Ribosomes. Acs Infect Dis., 6, 2020
2K6H	NMR structure of an unusually 28 kDa Active Mutant of Maize Ribosome-Inactivating protein (MOD) Descriptor: Ribosome-inactivating protein Authors: Yang, Y, Mak, A.N, Shaw, P.C, Sze, K.H. Deposit date: 2008-07-09 Release date: 2009-07-14 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of an active mutant of maize ribosome-inactivating protein (MOD) and its interaction with the ribosomal stalk protein P2. J.Mol.Biol., 395, 2010
1BRY	BRYODIN TYPE I RIP Descriptor: BRYODIN I Authors: Klei, H.E, Chang, C.Y. Deposit date: 1997-02-14 Release date: 1998-03-04 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Molecular, biological, and preliminary structural analysis of recombinant bryodin 1, a ribosome-inactivating protein from the plant Bryonia dioica. Biochemistry, 36, 1997
1CF5	BETA-MOMORCHARIN STRUCTURE AT 2.55 A Descriptor: PROTEIN (BETA-MOMORCHARIN), beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Yuan, Y.-R, He, Y.-N, Xiong, J.-P, Xia, Z.-X. Deposit date: 1999-03-24 Release date: 1999-06-07 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.55 Å) Cite: Three-dimensional structure of beta-momorcharin at 2.55 A resolution. Acta Crystallogr.,Sect.D, 55, 1999
5E1H	Ricin toxin in complex with neutralizing single chain monoclonal antibodies (VHHs) Descriptor: CHLORIDE ION, F8(JOB10) VHH antibody, Ricin Authors: Rudolph, M.J, Vance, D, Shoemaker, C, Mantis, N. Deposit date: 2015-09-29 Release date: 2016-08-03 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.032 Å) Cite: Structural analysis of nested neutralizing and non-neutralizing B cell epitopes on ricin toxin's enzymatic subunit. Proteins, 84, 2016
8T9V	RTA-RUNT-59 complex structure Descriptor: (9aP)-7-fluoro-4,5-dihydronaphtho[1,2-b]thiophene-2-carboxylic acid, NONAETHYLENE GLYCOL, Ricin Authors: Rudolph, M.J, Tumer, N. Deposit date: 2023-06-26 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (1.945 Å) Cite: Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem., 100, 2024
8TAB	RTA-PD00589 Descriptor: 1,2-ETHANEDIOL, 4H,5H-naphtho[1,2-b]thiophene-2-carboxylic acid, CHLORIDE ION, ... Authors: Rudolph, M.J, Tumer, N. Deposit date: 2023-06-27 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem., 100, 2024
8TAD	RTA in complex with inhibitor RUNT-206 Descriptor: (9aM)-5,5-dimethyl-4,5-dihydronaphtho[1,2-b]thiophene-2-carboxylic acid, CHLORIDE ION, NONAETHYLENE GLYCOL, ... Authors: Rudolph, M.J, Tumer, N. Deposit date: 2023-06-27 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Structure-based design and optimization of a new class of small molecule inhibitors targeting the P-stalk binding pocket of ricin. Bioorg.Med.Chem., 100, 2024
1D8V	THE RESTRAINED AND MINIMIZED AVERAGE NMR STRUCTURE OF MAP30. Descriptor: ANTI-HIV AND ANTI-TUMOR PROTEIN MAP30 Authors: Wang, Y.-X, Neamati, N, Jacob, J, Palmer, I, Stahl, S.J. Deposit date: 1999-10-26 Release date: 1999-11-19 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure of anti-HIV-1 and anti-tumor protein MAP30: structural insights into its multiple functions. Cell(Cambridge,Mass.), 99, 1999
3BWH	Atomic resolution structure of cucurmosin, a novel type 1 RIP from the sarcocarp of Cucurbita moschata Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Chen, L. Deposit date: 2008-01-09 Release date: 2008-10-07 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1 Å) Cite: Atomic resolution structure of cucurmosin, a novel type 1 ribosome-inactivating protein from the sarcocarp of Cucurbita moschata. J.Struct.Biol., 164, 2008
1D6A	STRUCTURE OF POKEWEED ANTIVIRAL PROTEIN COMPLEXED WITH GUANINE Descriptor: GUANINE, POKEWEED ANTIVIRAL PROTEIN Authors: Kurinov, I.V, Rajamohan, F, Venkatachalam, T.K, Uckun, F.M. Deposit date: 1999-10-12 Release date: 1999-12-16 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.1 Å) Cite: X-ray crystallographic analysis of the structural basis for the interaction of pokeweed antiviral protein with guanine residues of ribosomal RNA. Protein Sci., 8, 1999
5WV1	Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with ribose sugar at 1.90 A resolution. Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ribosome inactivating protein, ... Authors: Shokeen, A, Singh, P.K, Pandey, S, Kaur, P, Sharma, S, Singh, T.P. Deposit date: 2016-12-21 Release date: 2017-01-25 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with ribose sugar at 1.90 A resolution. To Be Published
3CTK	Crystal structure of the type 1 RIP bouganin Descriptor: rRNA N-glycosidase Authors: Fermani, S, Tosi, G, Falini, G, Ripamonti, A, Farini, V, Bolognesi, A, Polito, L. Deposit date: 2008-04-14 Release date: 2008-05-27 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure/function studies on two type 1 ribosome inactivating proteins: Bouganin and lychnin. J.Struct.Biol., 168, 2009
5Y48	Crystal structure of the complex of Ribosome inactivating protein from Momordica balsamina with Pyrimidine-2,4-dione at 1.70 Angstrom resolution Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome inactivating protein, URACIL Authors: Singh, P.K, Pandey, S, Iqbal, N, Kaur, P, Sharma, S, Singh, T.P. Deposit date: 2017-08-01 Release date: 2017-09-20 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Binding and structural studies of the complexes of type 1 ribosome inactivating protein from Momordica balsamina with uracil and uridine. Proteins, 87, 2019
5GU4	rRNA N-glycosylase RTA Descriptor: GLY-PHE-GLY-LEU-PHE-ASP, GLYCEROL, Ricin Authors: Shi, W.W, Tang, Y.S, Sze, S.Y, Zhu, Z.N, Wong, K.B, Shaw, P.C. Deposit date: 2016-08-24 Release date: 2016-11-02 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Crystal Structure of Ribosome-Inactivating Protein Ricin A Chain in Complex with the C-Terminal Peptide of the Ribosomal Stalk Protein P2 Toxins, 8, 2016
3EJ5	complex of Ricin A chain and pyrimidine-based inhibitor Descriptor: 4-[3-(2-amino-4-hydroxy-6-oxo-1,6-dihydropyrimidin-5-yl)propyl]benzoic acid, Ricin A chain Authors: Bai, Y, Monzingo, A.F, Robertus, J.D. Deposit date: 2008-09-17 Release date: 2009-04-07 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: The X-ray structure of ricin A chain with a novel inhibitor Arch.Biochem.Biophys., 483, 2009
5GM7	Crystal structure of Ribosome inactivating protein from Momordica balsamina at 1.78 Angstrom resolution Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Ribosome inactivating protein Authors: Singh, B, Singh, P.K, Pandey, S.N, Kaur, P, Sharma, S, Singh, T.P. Deposit date: 2016-07-13 Release date: 2016-07-27 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Crystal structure of Ribosome inactivating protein from Momordica balsamina at 1.78 Angstrom resolution To Be Published
5GZ7	Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ... Authors: Tiwari, P, Pandey, S.N, Kaur, P, Sharma, S, Singh, T.P. Deposit date: 2016-09-26 Release date: 2016-10-26 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal Structure of the complex of Ribosome Inactivating Protein with 1,2-ethanediol at 1.95 Angstrom resolution. To Be Published
5Z3J	Crystal Structure of Abrin A chain (Recombinant) in complex with Nicotinamide at 1.7 Angstroms Descriptor: Abrin A-chain, IMIDAZOLE, NICOTINAMIDE Authors: Bansia, H, Karande, A.A, Ramakumar, S. Deposit date: 2018-01-08 Release date: 2019-01-02 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10. FEBS J., 286, 2019
5Z3I	Crystal Structure of Abrin A chain (Recombinant) in complex with Adenine at 1.65 Angstroms Descriptor: ADENINE, Abrin A-chain Authors: Bansia, H, Karande, A.A, Ramakumar, S. Deposit date: 2018-01-08 Release date: 2019-01-02 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10. FEBS J., 286, 2019
5Z37	Crystal Structure of Abrin A chain (Recombinant) at 1.3 Angstroms Descriptor: Abrin A-chain, IMIDAZOLE Authors: Bansia, H, Karande, A.A, Ramakumar, S. Deposit date: 2018-01-05 Release date: 2019-01-02 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural basis for neutralization of cytotoxic abrin by monoclonal antibody D6F10. FEBS J., 286, 2019
5ILX	Crystal structure of Ribosome inactivating protein from Momordica balsamina with Uracil at 1.70 Angstrom resolution Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome inactivating protein, ... Authors: Singh, P.K, Singh, A, Pandey, S, Kaur, P, Sharma, S, Singh, T.P. Deposit date: 2016-03-05 Release date: 2016-03-23 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of Ribosome inactivating protein from Momordica balsamina with Uracil at 1.70 Angstrom resolution To Be Published
3H5K	Crystal structure of the ribosome inactivating protein PDL1 Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Ribosome-inactivating protein PD-L1/PD-L2 Authors: Ruggiero, A, Di Maro, A, Severino, V, Chambery, A, Berisio, R. Deposit date: 2009-04-22 Release date: 2009-10-13 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Crystal structure of PD-L1, a ribosome inactivating protein from Phytolacca dioica L. Leaves with the property to induce DNA cleavage Biopolymers, 91, 2009

<123456789101112>