PDB: 5725 resultsInfo pagesStatus searchChemie searchBIRD

---

8KA7	De novo design protein -NB7 Descriptor: De novo design protein -NB7 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: De novo design protein -NB7 To Be Published
8KC5	De novo design protein -T09 Descriptor: De novo design protein -T09 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.3 Å) Cite: De novo design protein -T09 To Be Published
8KA6	De novo design protein -NA7 Descriptor: De novo design protein -NA7 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-02 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.2 Å) Cite: De novo design protein -NA7 To Be Published
8KC8	De novo design protein -T11 Descriptor: De novo design protein -T11 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-06 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (2.65 Å) Cite: De novo design protein -T11 To Be Published
8KC1	De novo design protein -NX5 Descriptor: De novo design protein -NX5 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-05 Release date: 2024-08-07 Method: X-RAY DIFFRACTION (1.8 Å) Cite: De novo design protein -NX5 To Be Published
8KCJ	De novo design protein -N7 Descriptor: De novo design protein -N7, GLYCEROL Authors: Wang, S, Liu, Y. Deposit date: 2023-08-07 Release date: 2024-08-14 Method: X-RAY DIFFRACTION (1.45 Å) Cite: De novo design protein -N7 To Be Published
8KCK	De novo design protein -N9 Descriptor: De novo design protein -N9 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-07 Release date: 2024-08-14 Method: X-RAY DIFFRACTION (1.35 Å) Cite: De novo design protein -N9 To Be Published
8KDQ	De novo design protein -T03 Descriptor: De novo design protein -T03 Authors: Wang, S, Liu, Y. Deposit date: 2023-08-09 Release date: 2024-08-14 Method: X-RAY DIFFRACTION (1.7 Å) Cite: De novo design protein -T03 To Be Published
7CBC	Crystal structure of a de novo designed switch protein caging a hemagglutinin binder Descriptor: De novo designed switch protein caging a hemagglutinin binder (sCageHA267_1S), ETHANOL Authors: Lee, H, Oh, B.-H, Baker, D. Deposit date: 2020-06-11 Release date: 2020-12-23 Last modified: 2021-03-31 Method: X-RAY DIFFRACTION (1.99 Å) Cite: De novo design of modular and tunable protein biosensors. Nature, 591, 2021
6MRR	De novo designed protein Foldit1 Descriptor: Foldit1 Authors: Koepnick, B, Bick, M.J, Estep, R.D, Kleinfelter, S, Wei, L, Baker, D. Deposit date: 2018-10-15 Release date: 2019-06-12 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.18 Å) Cite: De novo protein design by citizen scientists. Nature, 570, 2019
6MRS	De novo designed protein Peak6 Descriptor: Peak6, SULFATE ION Authors: Koepnick, B, Boykov, A, Baker, D. Deposit date: 2018-10-15 Release date: 2019-06-12 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.541 Å) Cite: De novo protein design by citizen scientists. Nature, 570, 2019
8TNC	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo niraparib Descriptor: 2-{4-[(3S)-piperidin-3-yl]phenyl}-2H-indazole-7-carboxamide, De novo designed protein Authors: Lu, L, DeGrado, W.F. Deposit date: 2023-08-01 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TND	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo veliparib Descriptor: (2R)-2-(7-carbamoyl-1H-benzimidazol-2-yl)-2-methylpyrrolidinium, De novo designed protein, SULFATE ION Authors: Lu, L, DeGrado, W.F. Deposit date: 2023-08-01 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.29 Å) Cite: De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8TNB	De novo designed protein binds poly ADP ribose polymerase inhibitors (PARPi) - holo mefuparib Descriptor: 5-fluoro-2-{4-[(methylamino)methyl]phenyl}-1-benzofuran-7-carboxamide, De novo designed protein Authors: Lu, L, DeGrado, W.F. Deposit date: 2023-08-01 Release date: 2024-04-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: De novo design of drug-binding proteins with predictable binding energy and specificity. Science, 384, 2024
8K83	De novo design protein -N2 Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, De novo design protein, GLYCEROL Authors: Wang, S, Liu, Y. Deposit date: 2023-07-28 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (1.8 Å) Cite: De novo design protein -N2 To Be Published
8K84	De novo design protein -N3 Descriptor: DI(HYDROXYETHYL)ETHER, De novo design protein Authors: Wang, S, Liu, Y. Deposit date: 2023-07-28 Release date: 2024-07-31 Method: X-RAY DIFFRACTION (2 Å) Cite: De novo design protein -N3 To Be Published
1PBZ	DE NOVO DESIGNED PEPTIDE-METALLOPORPHYRIN COMPLEX, SOLUTION STRUCTURE Descriptor: COPROPORPHYRIN I CONTAINING CO(III), De novo designed cyclic peptide Authors: Wang, J, Rosenblatt, M.M, Suslick, K.S. Deposit date: 2003-05-15 Release date: 2003-12-09 Last modified: 2022-02-23 Method: SOLUTION NMR Cite: De novo designed cyclic-peptide heme complexes Proc.Natl.Acad.Sci.USA, 100, 2003
6X1K	Solution NMR structure of de novo designed TMB2.3 Descriptor: De novo designed transmembrane beta-barrel TMB2.3 Authors: Liang, B, Vorobieva, A.A, Chow, C.M, Baker, D, Tamm, L.K. Deposit date: 2020-05-19 Release date: 2021-02-17 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: De novo design of transmembrane beta barrels. Science, 371, 2021
6E5C	Solution NMR structure of a de novo designed double-stranded beta-helix Descriptor: De novo beta protein Authors: Marcos, E, Chidyausiku, T.M, McShan, A, Evangelidis, T, Nerli, S, Sgourakis, N, Tripsianes, K, Baker, D. Deposit date: 2018-07-19 Release date: 2018-11-07 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: De novo design of a non-local beta-sheet protein with high stability and accuracy. Nat. Struct. Mol. Biol., 25, 2018
7UWY	NMR solution structure of the De novo designed small beta-barrel protein 29_bp_sh3 Descriptor: De novo designed small beta-barrel protein 29_bp_sh3 Authors: Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D. Deposit date: 2022-05-04 Release date: 2023-03-22 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: De novo design of small beta barrel proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
7UWZ	NMR solution structure of the De novo designed small beta-barrel protein 33_bp_sh3 Descriptor: De novo designed small beta-barrel protein 33_bp_sh3 Authors: Peterson, F.C, Kim, D.E, Jensen, D.R, Saleem, A, Chow, C.M, Volkman, B.F, Baker, D. Deposit date: 2022-05-04 Release date: 2023-03-22 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: De novo design of small beta barrel proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
6YWD	De novo designed protein 4H_01 in complex with Mota antibody Descriptor: Antibody Mota, Heavy Chain, Light Chain, ... Authors: Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E. Deposit date: 2020-04-29 Release date: 2020-10-07 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Bottom-up de novo design of functional proteins with complex structural features. Nat.Chem.Biol., 17, 2021
6YWC	De novo designed protein 4E1H_95 in complex with 101F antibody Descriptor: Antibody 101F, Heavy Chain, light chain, ... Authors: Yang, C, Sesterhenn, F, Pojer, F, Correia, B.E. Deposit date: 2020-04-29 Release date: 2020-10-07 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Bottom-up de novo design of functional proteins with complex structural features. Nat.Chem.Biol., 17, 2021
6VG7	De novo designed Rossmann fold protein ROS2_49223 Descriptor: De novo designed protein RO2_25 Authors: Pan, X, Zhang, Y, Kelly, M, Kortemme, T. Deposit date: 2020-01-07 Release date: 2020-08-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Expanding the space of protein geometries by computational design of de novo fold families. Science, 369, 2020
6VGA	De novo designed Rossmann fold protein ROS2_835 Descriptor: De novo designed protein RO2_1 Authors: Pan, X, Zhang, Y, Kelly, M, Kortemme, T. Deposit date: 2020-01-07 Release date: 2020-08-19 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Expanding the space of protein geometries by computational design of de novo fold families. Science, 369, 2020

<12345678910111213141516>