PDB: 224931 resultsInfo pagesStatus searchChemie searchBIRD

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2NXN	T. thermophilus ribosomal protein L11 methyltransferase (PrmA) in complex with ribosomal protein L11 Descriptor: 50S ribosomal protein L11, Ribosomal protein L11 methyltransferase Authors: Demirci, H, Gregory, S.T, Dahlberg, A.E, Jogl, G. Deposit date: 2006-11-17 Release date: 2006-12-26 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Recognition of ribosomal protein L11 by the protein trimethyltransferase PrmA. Embo J., 26, 2007
2NXO	Crystal structure of protein SCO4506 from Streptomyces coelicolor, Pfam DUF178 Descriptor: Hypothetical protein SCO4506 Authors: Tyagi, R, Eswaramoorthy, S, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2006-11-17 Release date: 2006-12-19 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.04 Å) Cite: The crystal structure of a hypothetical protein SCO4506 (gene ID: Q9L0T8) from Streptomyces coelicolor to 2.04 Angstrom resolution To be Published
2NXP	Structure of NTD2 domain of the human TAF5 subunit of TFIID Descriptor: CALCIUM ION, Transcription initiation factor TFIID subunit 5 Authors: Bhattacharya, S, Takada, S, Jacobson, R.H. Deposit date: 2006-11-17 Release date: 2007-01-09 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.17 Å) Cite: Structural analysis and dimerization potential of the human TAF5 subunit of TFIID. Proc.Natl.Acad.Sci.Usa, 104, 2007
2NXQ	Crystal structure of calcium binding protein 1 from Entamoeba histolytica: a novel arrangement of EF hand motifs Descriptor: ACETATE ION, CALCIUM ION, Calcium-binding protein Authors: Kumar, S, Padhan, N, Alam, N, Gourinath, S. Deposit date: 2006-11-18 Release date: 2007-08-21 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of calcium binding protein-1 from Entamoeba histolytica: A novel arrangement of EF hand motifs. Proteins, 68, 2007
2NXR	Structural effects of hydrophobic mutations on the active site of human carbonic anhydrase II Descriptor: SULFATE ION, ZINC ION, carbonic anhydrase 2 Authors: Fisher, S.Z, McKenna, R. Deposit date: 2006-11-19 Release date: 2007-04-24 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Speeding Up Proton Transfer in a Fast Enzyme: Kinetic and Crystallographic Studies on the Effect of Hydrophobic Amino Acid Substitutions in the Active Site of Human Carbonic Anhydrase II. Biochemistry, 46, 2007
2NXS	Structural and kinetic effects of hydrophobic mutations in the active site of human carbonic anhydrase II Descriptor: SULFATE ION, ZINC ION, carbonic anhydrase 2 Authors: Fisher, S.Z, McKenna, R. Deposit date: 2006-11-19 Release date: 2007-04-24 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Speeding Up Proton Transfer in a Fast Enzyme: Kinetic and Crystallographic Studies on the Effect of Hydrophobic Amino Acid Substitutions in the Active Site of Human Carbonic Anhydrase II. Biochemistry, 46, 2007
2NXT	Structural and kinetic effects of hydrophobic mutations in the active site of human carbonic anhydrase II Descriptor: ZINC ION, carbonic anhydrase 2 Authors: Fisher, S.Z, McKenna, R. Deposit date: 2006-11-19 Release date: 2007-04-24 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.15 Å) Cite: Speeding Up Proton Transfer in a Fast Enzyme: Kinetic and Crystallographic Studies on the Effect of Hydrophobic Amino Acid Substitutions in the Active Site of Human Carbonic Anhydrase II. Biochemistry, 46, 2007
2NXU	Atomic structure of translation initiation factor aIF2 beta-subunit from Archaebacteria sulfolobus solfataricus: high resolution NMR in solution Descriptor: Translation initiation factor 2 beta subunit Authors: Vasile, F, Pechkova, E, Stolboushkina, E, Garber, M, Nicolini, C. Deposit date: 2006-11-20 Release date: 2007-10-30 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Solution structure of the beta-subunit of the translation initiation factor aIF2 from archaebacteria Sulfolobus solfataricus. Proteins, 70, 2007
2NXV	Structure of the 6th ORF of the Rhodobacter blastica ATPase operon; Majastridin Descriptor: ATP synthase subunits region ORF 6, GLYCEROL Authors: Enroth, C, Strid, A. Deposit date: 2006-11-20 Release date: 2007-12-18 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.1 Å) Cite: Crystal structure of a protein, structurally related to glycosyltransferases, encoded in the Rhodobacter blasticus atp operon. Biochim.Biophys.Acta, 1784, 2008
2NXW	Crystal structure of phenylpyruvate decarboxylase of Azospirillum brasilense Descriptor: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... Authors: Versees, W, Spaepen, S, Vanderleyden, J, Steyaert, J. Deposit date: 2006-11-20 Release date: 2007-05-29 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The crystal structure of phenylpyruvate decarboxylase from Azospirillum brasilense at 1.5 A resolution. Implications for its catalytic and regulatory mechanism. Febs J., 274, 2007
2NXX	Crystal Structure of the Ligand-Binding Domains of the T.castaneum (Coleoptera) Heterodimer EcrUSP Bound to Ponasterone A Descriptor: 2,3,14,20,22-PENTAHYDROXYCHOLEST-7-EN-6-ONE, Ecdysone Receptor (EcR, NRH1), ... Authors: Iwema, T, Billas, I, Moras, D. Deposit date: 2006-11-20 Release date: 2007-10-02 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Structural and functional characterization of a novel type of ligand-independent RXR-USP receptor. Embo J., 26, 2007
2NXY	HIV-1 gp120 Envelope Glycoprotein(S334A) Complexed with CD4 and Antibody 17b Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NXZ	HIV-1 gp120 Envelope Glycoprotein (T257S, S334A, S375W) Complexed with CD4 and Antibody 17b Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY0	HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, T257S, V275C, S334A, S375W, A433M) Complexed with CD4 and Antibody 17b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY1	HIV-1 gp120 Envelope Glycoprotein (I109C, T257S, S334A, S375W, Q428C) Complexed with CD4 and Antibody 17b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY2	HIV-1 gp120 Envelope Glycoprotein (T123C, T257S, S334A, S375W, G431C) Complexed with CD4 and Antibody 17b Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY3	HIV-1 gp120 Envelope Glycoprotein (K231C, T257S, E267C, S334A, S375W) Complexed with CD4 and Antibody 17b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY4	HIV-1 gp120 Envelope Glycoprotein (K231C, T257S, E268C, S334A, S375W) Complexed with CD4 and Antibody 17b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY5	HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, I109C, T257S, V275C, S334A, S375W, Q428C, A433M) Complexed with CD4 and Antibody 17b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY6	HIV-1 gp120 Envelope Glycoprotein (M95W, W96C, I109C, T123C, T257S, V275C,S334A, S375W, Q428C, G431C) Complexed with CD4 and Antibody 17b Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY7	HIV-1 gp120 Envelope Glycoprotein Complexed with the Broadly Neutralizing CD4-Binding-Site Antibody b12 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY b12, HEAVY CHAIN, ... Authors: Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D. Deposit date: 2006-11-20 Release date: 2007-02-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural definition of a conserved neutralization epitope on HIV-1 gp120. Nature, 445, 2007
2NY8	NMR structure of antibacterial defensin DEF-AAA from the insect anopheles gambiae Descriptor: defensin Authors: Landon, C, Barbault, F, Vovelle, F. Deposit date: 2006-11-20 Release date: 2007-11-13 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Rational design of peptides active against the gram positive bacteria Staphylococcus aureus Proteins, 72, 2008
2NY9	NMR structure of DEF-ABB, a mutant of anopheles defensin DEF-AAA Descriptor: defensin, mutant DEF-ABB Authors: Landon, C, Barbault, F, Vovelle, F. Deposit date: 2006-11-20 Release date: 2007-11-13 Last modified: 2023-12-27 Method: SOLUTION NMR Cite: Rational design of peptides active against the gram positive bacteria Staphylococcus aureus Proteins, 72, 2008
2NYA	Crystal structure of the periplasmic nitrate reductase (NAP) from Escherichia coli Descriptor: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, IRON/SULFUR CLUSTER, MOLYBDENUM(VI) ION, ... Authors: Jepson, B.J.N, Richardson, D.J, Hemmings, A.M. Deposit date: 2006-11-20 Release date: 2006-12-05 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Spectropotentiometric and structural analysis of the periplasmic nitrate reductase from Escherichia coli J.Biol.Chem., 282, 2007
2NYB	Crystal structure of E.Coli Iron Superoxide Dismutase Q69E at 1.1 Angstrom resolution Descriptor: FE (II) ION, OXYGEN ATOM, Superoxide dismutase [FE] Authors: Porta, J.C, Vahedi-Faridi, A, Borgstahl, G.E.O. Deposit date: 2006-11-20 Release date: 2006-12-05 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.1 Å) Cite: How Can a Single Second Sphere Amino Acid Substitution Cause Reduction Midpoint Potential Changes of Hundreds of Millivolts? J.Am.Chem.Soc., 129, 2007

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