Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8J0O
DownloadVisualize
BU of 8j0o by Molmil
cryo-EM structure of human EMC and VDAC
Descriptor: ER membrane protein complex subunit 1, ER membrane protein complex subunit 10, ER membrane protein complex subunit 2, ...
Authors:Li, M, Zhang, C, Wu, J, Lei, M.
Deposit date:2023-04-11
Release date:2024-04-03
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Structural insights into human EMC and its interaction with VDAC.
Aging (Albany NY), 16, 2024
6G6U
DownloadVisualize
BU of 6g6u by Molmil
The dynamic nature of the VDAC1 channels in bilayers: human VDAC1 at 2.7 Angstrom resolution
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, NITRATE ION, Voltage-dependent anion-selective channel protein 1
Authors:Razeto, A, Gribbon, P, Loew, C.
Deposit date:2018-04-03
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:The dynamic nature of the VDAC1 channels in bilayers as revealed by two crystal structures of the human isoform in bicelles at 2.7 and 3.3 Angstrom resolution: implications for VDAC1 voltage-dependent mechanism and for its oligomerization
To Be Published
7QGJ
DownloadVisualize
BU of 7qgj by Molmil
Apo structure of BIR2 Domain of BIRC2
Descriptor: 1,2-ETHANEDIOL, Baculoviral IAP repeat-containing protein 2, ZINC ION
Authors:Kraemer, A, Farges, F, Schwalm, M.P, Saxena, K, Preuss, F, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2021-12-08
Release date:2022-02-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Apo structure BIR2 Domain of BIRC2
To Be Published
5K20
DownloadVisualize
BU of 5k20 by Molmil
Caspase-7 S239E Phosphomimetic
Descriptor: Caspase-7 large subunit, Caspase-7 small subunit, FORMIC ACID
Authors:Eron, S.J, Hardy, J.A.
Deposit date:2016-05-18
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PAK2 Phosphorylation Inhibits Caspase-7 by Two Divergent Mechanisms: Slowing Activation and Blocking Substrate Binding
To Be Published
1K86
DownloadVisualize
BU of 1k86 by Molmil
Crystal structure of caspase-7
Descriptor: caspase-7
Authors:Chai, J, Wu, Q, Shiozaki, E, Srinivasa, S.M, Alnemri, E.S, Shi, Y.
Deposit date:2001-10-23
Release date:2001-11-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding
Cell(Cambridge,Mass.), 107, 2001
1K88
DownloadVisualize
BU of 1k88 by Molmil
Crystal structure of procaspase-7
Descriptor: procaspase-7
Authors:Chai, J, Wu, Q, Shiozaki, E, Srinivasa, S.M, Alnemri, E.S, Shi, Y.
Deposit date:2001-10-23
Release date:2001-11-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a procaspase-7 zymogen: mechanisms of activation and substrate binding
Cell(Cambridge,Mass.), 107, 2001
1U62
DownloadVisualize
BU of 1u62 by Molmil
NMR structure analysis of the lactoferrin-based peptide FQWQRNIRKVR in complex with lipopolysaccharide
Descriptor: lactoferrin-based peptide
Authors:Japelj, B, Pristovsek, P, Majerle, A, Jerala, R.
Deposit date:2004-07-29
Release date:2005-03-22
Last modified:2020-06-24
Method:SOLUTION NMR
Cite:Structural Origin of Endotoxin Neutralization and Antimicrobial Activity of a Lactoferrin-based Peptide
J.Biol.Chem., 280, 2005
1VHN
DownloadVisualize
BU of 1vhn by Molmil
Crystal structure of a putative flavin oxidoreductase with flavin
Descriptor: FLAVIN MONONUCLEOTIDE, SULFATE ION, putative flavin oxidoreductase
Authors:Structural GenomiX
Deposit date:2003-12-01
Release date:2003-12-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:The 1.59 A resolution crystal structure of TM0096, a flavin mononucleotide binding protein from Thermotoga maritima.
Proteins, 55, 2004
6TIQ
DownloadVisualize
BU of 6tiq by Molmil
Refined solution NMR structure of hVDAC-1 in detergent micelles
Descriptor: Voltage-dependent anion-selective channel protein 1
Authors:Boehm, R, Hiller, S, Wagner, G.
Deposit date:2019-11-22
Release date:2019-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structural Basis for Low Conductance in the Membrane Protein VDAC upon beta-NADH Binding and Voltage Gating.
Structure, 28, 2020
1E2A
DownloadVisualize
BU of 1e2a by Molmil
ENZYME IIA FROM THE LACTOSE SPECIFIC PTS FROM LACTOCOCCUS LACTIS
Descriptor: ENZYME IIA, MAGNESIUM ION
Authors:Sliz, P, Engelmann, R, Hengstenberg, W, Pai, E.F.
Deposit date:1997-04-25
Release date:1998-04-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of enzyme IIAlactose from Lactococcus lactis reveals a new fold and points to possible interactions of a multicomponent system.
Structure, 5, 1997
1EUD
DownloadVisualize
BU of 1eud by Molmil
CRYSTAL STRUCTURE OF PHOSPHORYLATED PIG HEART, GTP-SPECIFIC SUCCINYL-COA SYNTHETASE
Descriptor: SUCCINYL-COA SYNTHETASE, ALPHA CHAIN, BETA CHAIN, ...
Authors:Fraser, M.E, James, M.N.G, Bridger, W.A, Wolodko, W.T.
Deposit date:2000-04-14
Release date:2000-07-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phosphorylated and dephosphorylated structures of pig heart, GTP-specific succinyl-CoA synthetase.
J.Mol.Biol., 299, 2000
6OAJ
DownloadVisualize
BU of 6oaj by Molmil
HUaE34K 19bp SYM DNA
Descriptor: DNA (5'-D(P*CP*GP*GP*TP*TP*CP*AP*AP*TP*TP*GP*GP*CP*AP*CP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*GP*TP*GP*CP*CP*AP*AP*TP*TP*GP*AP*AP*CP*CP*GP*C)-3'), DNA-binding protein HU-alpha
Authors:Remesh, S.G, Hammel, M.
Deposit date:2019-03-16
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (4.092 Å)
Cite:Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020
1EUC
DownloadVisualize
BU of 1euc by Molmil
CRYSTAL STRUCTURE OF DEPHOSPHORYLATED PIG HEART, GTP-SPECIFIC SUCCINYL-COA SYNTHETASE
Descriptor: PHOSPHATE ION, SUCCINYL-COA SYNTHETASE, ALPHA CHAIN, ...
Authors:Fraser, M.E, James, M.N.G, Bridger, W.A, Wolodko, W.T.
Deposit date:2000-04-14
Release date:2000-07-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Phosphorylated and dephosphorylated structures of pig heart, GTP-specific succinyl-CoA synthetase.
J.Mol.Biol., 299, 2000
1F1J
DownloadVisualize
BU of 1f1j by Molmil
CRYSTAL STRUCTURE OF CASPASE-7 IN COMPLEX WITH ACETYL-ASP-GLU-VAL-ASP-CHO
Descriptor: ACE-ASP-GLU-VAL-ASP-CHO, CASPASE-7 PROTEASE, SULFATE ION
Authors:Wei, Y, Charifson, P.S.
Deposit date:2000-05-19
Release date:2001-05-23
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structures of caspases-1, -3, -7 and -8 reveal the basis for substrate and inhibitor selectivity.
Chem.Biol., 7, 2000
6O8Q
DownloadVisualize
BU of 6o8q by Molmil
HUaa 19bp SYM DNA pH 4.5
Descriptor: DNA (57-MER), DNA-binding protein HU-alpha
Authors:Remesh, S.G, Hammel, M.
Deposit date:2019-03-11
Release date:2020-03-18
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.216 Å)
Cite:Nucleoid remodeling during environmental adaptation is regulated by HU-dependent DNA bundling.
Nat Commun, 11, 2020
6TIR
DownloadVisualize
BU of 6tir by Molmil
NOE based model of hVDAC-1 bound to beta-NADH in detergent micelles
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Voltage-dependent anion-selective channel protein 1
Authors:Boehm, R, Hiller, S, Wagner, G.
Deposit date:2019-11-22
Release date:2019-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structural Basis for Low Conductance in the Membrane Protein VDAC upon beta-NADH Binding and Voltage Gating.
Structure, 28, 2020
1KMC
DownloadVisualize
BU of 1kmc by Molmil
Crystal Structure of the Caspase-7 / XIAP-BIR2 Complex
Descriptor: Caspase-7, X-LINKED INHIBITOR OF APOPTOSIS PROTEIN
Authors:Riedl, S.J, Salvesen, G.S, Bode, W.
Deposit date:2001-12-14
Release date:2002-01-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Caspase-7 / XIAP-BIR2 Complex
TO BE PUBLISHED
6CL1
DownloadVisualize
BU of 6cl1 by Molmil
Caspase-7 in complex with Ac-DW3-KE
Descriptor: ACE-1MH-ASP-B3L-PHE-1U8, Caspase-7 subunit p11, Caspase-7 subunit p20
Authors:Solania, A.T, Gonzalez-Paez, G.E, Wolan, D.W.
Deposit date:2018-03-01
Release date:2019-03-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.651 Å)
Cite:Selective and Rapid Cell-Permeable Inhibitor of Human Caspase-3.
Acs Chem.Biol., 14, 2019
1LR1
DownloadVisualize
BU of 1lr1 by Molmil
Solution Structure of the Oligomerization Domain of the Bacterial Chromatin-Structuring Protein H-NS
Descriptor: dna-binding protein h-ns
Authors:Esposito, D, Petrovic, A, Harris, R, Ono, S, Eccleston, J, Mbabaali, A, Haq, I, Higgins, C.F, Hinton, J.C.D, Driscoll, P.C, Ladbury, J.E.
Deposit date:2002-05-14
Release date:2003-01-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:H-NS Oligomerization Domain Structure Reveals the Mechanism for High Order Self-association of the Intact Protein
J.Mol.Biol., 324, 2002
5CAE
DownloadVisualize
BU of 5cae by Molmil
Succinate bound to pig GTP-specific succinyl-CoA synthetase
Descriptor: CHLORIDE ION, COENZYME A, GLYCEROL, ...
Authors:Huang, J, Fraser, M.E.
Deposit date:2015-06-29
Release date:2016-06-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the binding of succinate to succinyl-CoA synthetase.
Acta Crystallogr D Struct Biol, 72, 2016
1MUL
DownloadVisualize
BU of 1mul by Molmil
Crystal structure of the E. coli HU alpha2 protein
Descriptor: DNA binding protein HU-alpha
Authors:Ramstein, J, Hervouet, N, Coste, F, Zelwer, C, Oberto, J, Castaing, B.
Deposit date:2002-09-24
Release date:2003-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evidence of a Thermal Unfolding Dimeric Intermediate for the Escherichia coli Histone-like HU Proteins: Thermodynamics and Structure.
J.Mol.Biol., 331, 2003
5DKO
DownloadVisualize
BU of 5dko by Molmil
The structure of Escherichia coli ZapD
Descriptor: Cell division protein ZapD, SULFATE ION
Authors:Wroblewski, C, Kimber, M.S.
Deposit date:2015-09-03
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and Mutational Analyses of Escherichia coli ZapD Reveal Charged Residues Involved in FtsZ Filament Bundling.
J.Bacteriol., 198, 2016
1NI8
DownloadVisualize
BU of 1ni8 by Molmil
H-NS dimerization motif
Descriptor: DNA-binding protein H-NS
Authors:Bloch, V, Yang, Y, Margeat, E, Chavanieu, A, Aug, M.T, Robert, B, Arold, S, Rimsky, S, Kochoyan, M.
Deposit date:2002-12-22
Release date:2003-02-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The H-NS dimerisation domain defines a new fold contributing to DNA recognition
Nat.Struct.Biol., 10, 2003
1B2M
DownloadVisualize
BU of 1b2m by Molmil
THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.
Descriptor: 5'-R(*GP*(U34))-3', RIBONUCLEASE T1
Authors:Arni, R.K, Watanabe, L, Ward, R.J, Kreitman, R.J, Kumar, K, Walz Jr, F.G.
Deposit date:1998-11-27
Release date:1999-03-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of ribonuclease T1 complexed with an isosteric phosphonate substrate analogue of GpU: alternate substrate binding modes and catalysis.
Biochemistry, 38, 1999
6FGM
DownloadVisualize
BU of 6fgm by Molmil
The NMR solution structure of the peptide AC12 from Hypsiboas raniceps
Descriptor: ALA-CYS-PHE-LEU-THR-ARG-LEU-GLY-THR-TYR-VAL-CYS
Authors:Popov, C.S.F.C, Simas, B.S, Goodfellow, B.J, Bocca, A.L, Andrade, P.B, Pereira, D, Valentao, P, Pereira, P.J.B, Rodrigues, J.E, Veloso Jr, P.H.H, Rezende, T.M.B.
Deposit date:2018-01-11
Release date:2019-01-09
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Host-defense peptides AC12, DK16 and RC11 with immunomodulatory activity isolated from Hypsiboas raniceps skin secretion.
Peptides, 113, 2019

221716

건을2024-06-26부터공개중

PDB statisticsPDBj update infoContact PDBjnumon