PDB: 45677 resultsInfo pagesStatus searchChemie searchBIRD

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8BSD	SARS-CoV-2 nsp10-16 methyltransferase in complex with tubercidin Descriptor: '2-(4-AMINO-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-HYDROXYMETHYL-TETRAHYDRO-FURAN-3,4-DIOL, 1,2-ETHANEDIOL, 2'-O-methyltransferase nsp16, ... Authors: Kremling, V, Oberthuer, D, Sprenger, J. Deposit date: 2022-11-24 Release date: 2022-12-07 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structures of Tubercidin bound to the active site of the SARS-CoV-2 methyltransferase nsp10-16 To Be Published
7UHC	SARS-CoV-2 spike in complex with AHB2-2GS-SB175 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Multivalent miniprotein inhibitor AHB2-2GS-SB175, ... Authors: Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D. Deposit date: 2022-03-26 Release date: 2022-06-08 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Multivalent designed proteins neutralize SARS-CoV-2 variants of concern and confer protection against infection in mice. Sci Transl Med, 14, 2022
7V76	Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351), uncleavable form, one RBD-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351), uncleavable form, one RBD-up conformation To Be Published
7V7T	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 1 To Be Published
7V7Z	Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form To Be Published
7V8C	Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351), Cleavable form, one RBD-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351), Cleavable form, one RBD-up conformation To Be Published
7V7O	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 1 To Be Published
7V7E	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), one RBD-up conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), one RBD-up conformation 1 To Be Published
7V7N	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), all RBD-down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), all RBD-down conformation To Be Published
8BET	Structure of D188A-fructofuranosidase from Rhodotorula dairenesis in complex with sucrose Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-fructofuranosidase, ... Authors: Jimenez-Ortega, E, Sanz-Aparicio, J. Deposit date: 2022-10-21 Release date: 2022-12-28 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential. Int J Mol Sci, 23, 2022
7V82	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 1 To Be Published
7V78	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), one RBD-up conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), one RBD-up conformation 1 To Be Published
7V79	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), one RBD-up conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), one RBD-up conformation 2 To Be Published
7H7S	Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain -- Crystal structure of Chikungunya virus nsP3 macrodomain in complex with Z335807570 (CHIKV_MacB-x0935) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ... Authors: Aschenbrenner, J.C, Fairhead, M, Godoy, A.S, Balcomb, B.H, Capkin, E, Chandran, A.V, Dolci, I, Golding, M, Koekemoer, L, Lithgo, R.M, Marples, P.G, Ni, X, Oliva, G, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Fearon, D, von Delft, F. Deposit date: 2024-04-26 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (1.37 Å) Cite: Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain To Be Published
7V7A	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), two RBD-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), two RBD-up conformation To Be Published
7V81	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, two ACE2-bound form To Be Published
7H87	Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain -- Crystal structure of Chikungunya virus nsP3 macrodomain in complex with Z1741968196 (CHIKV_MacB-x1132) Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, DIMETHYL SULFOXIDE, ... Authors: Aschenbrenner, J.C, Fairhead, M, Godoy, A.S, Balcomb, B.H, Capkin, E, Chandran, A.V, Dolci, I, Golding, M, Koekemoer, L, Lithgo, R.M, Marples, P.G, Ni, X, Oliva, G, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Fearon, D, von Delft, F. Deposit date: 2024-04-26 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain To Be Published
7V7U	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 2 To Be Published
7V7R	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 4 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 4 To Be Published
7H8L	Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain -- Crystal structure of Chikungunya virus nsP3 macrodomain in complex with Z212053854 (CHIKV_MacB-x1213) Descriptor: 1,2,3,4-tetrahydro-1,5-naphthyridine, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, ... Authors: Aschenbrenner, J.C, Fairhead, M, Godoy, A.S, Balcomb, B.H, Capkin, E, Chandran, A.V, Dolci, I, Golding, M, Koekemoer, L, Lithgo, R.M, Marples, P.G, Ni, X, Oliva, G, Thompson, W, Tomlinson, C.W.E, Wild, C, Winokan, M, Xavier, M.-A.E, Fearon, D, von Delft, F. Deposit date: 2024-04-26 Release date: 2024-05-29 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain To Be Published
7V7F	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), one RBD-up conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), one RBD-up conformation 2 To Be Published
8BES	Structure of D188A-fructofuranosidase from Rhodotorula dairenensis in complex with fructose Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Jimenez-Ortega, E, Sanz-Aparicio, J. Deposit date: 2022-10-21 Release date: 2022-12-28 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.86 Å) Cite: Insights into the Structure of the Highly Glycosylated Ffase from Rhodotorula dairenensis Enhance Its Biotechnological Potential. Int J Mol Sci, 23, 2022
7V7D	Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), all RBD-down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), all RBD-down conformation To Be Published
7V83	Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2,Green fluorescent protein, ... Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-22 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form conformation 2 To Be Published
7V7S	Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 5 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Yang, T.J, Yu, P.Y, Chang, Y.C, Hsu, S.T.D. Deposit date: 2021-08-21 Release date: 2021-10-06 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 5 To Be Published

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