PDB: 98078 resultsInfo pagesStatus searchChemie searchBIRD

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1NVF	Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+, ADP and carbaphosphonate Descriptor: 3-DEHYDROQUINATE SYNTHASE, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ... Authors: Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K. Deposit date: 2003-02-03 Release date: 2003-03-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase J.MOL.BIOL., 327, 2003
4R1M	Crystal structure of a Putative Acyl-CoA ligase (BT_0428) from Bacteroides thetaiotaomicron VPI-5482 at 2.48 A resolution Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, CHLORIDE ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2014-08-06 Release date: 2014-08-27 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Crystal structure of a Hypothetical Acyl-CoA ligase (BT_0428) from Bacteroides thetaiotaomicron VPI-5482 at 2.48 A resolution To be published
1NVE	Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and NAD Descriptor: 3-DEHYDROQUINATE SYNTHASE, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K. Deposit date: 2003-02-03 Release date: 2003-03-18 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.58 Å) Cite: Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase J.MOL.BIOL., 327, 2003
1VWP	STREPTAVIDIN COMPLEXED WITH CYCLO-AC-[CHPQGPPC]-NH2 MONOMER, PH 2.5 Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.75 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
1VWJ	STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 2.5, I222 COMPLEX Descriptor: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.45 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
2YZN	Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8. Descriptor: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER Authors: Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-05-06 Release date: 2007-11-06 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8 To be Published
3NIL	The structure of UBR box (RDAA) Descriptor: ACETATE ION, E3 ubiquitin-protein ligase UBR1, Peptide RDAA, ... Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
2QIZ	Structure of the yeast U-box-containing ubiquitin ligase Ufd2p Descriptor: POTASSIUM ION, Ubiquitin conjugation factor E4 Authors: Tu, D, Brunger, A.T. Deposit date: 2007-07-06 Release date: 2007-09-18 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.56 Å) Cite: Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p. Proc.Natl.Acad.Sci.Usa, 104, 2007
3NIK	The structure of UBR box (REAA) Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide REAA, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
3NIS	The structure of UBR box (native2) Descriptor: ACETATE ION, E3 ubiquitin-protein ligase UBR1, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
7BEU	Human glutathione transferase M1-1 Descriptor: Glutathione S-transferase Mu 1, SODIUM ION Authors: Papageorgiou, A.C, Poudel, N. Deposit date: 2020-12-28 Release date: 2022-01-12 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.59 Å) Cite: Ligandability Assessment of Human Glutathione Transferase M1-1 Using Pesticides as Chemical Probes. Int J Mol Sci, 23, 2022
2YZM	Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8 Descriptor: D-ALANINE, D-alanine--D-alanine ligase Authors: Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-05-06 Release date: 2007-11-06 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.21 Å) Cite: Structure of D-Alanine:D-Alanine Ligase with substrate from Thermus thermophilus HB8 To be Published
3NII	The structure of UBR box (KIAA) Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide KIAA, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
3NIM	The structure of UBR box (RRAA) Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RRAA, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
1SWV	Crystal structure of the D12A mutant of phosphonoacetaldehyde hydrolase complexed with magnesium Descriptor: MAGNESIUM ION, phosphonoacetaldehyde hydrolase Authors: Zhang, G, Morais, M.C, Dai, J, Zhang, W, Dunaway-Mariano, D, Allen, K.N. Deposit date: 2004-03-30 Release date: 2004-10-05 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Investigation of metal ion binding in phosphonoacetaldehyde hydrolase identifies sequence markers for metal-activated enzymes of the HAD enzyme superfamily Biochemistry, 43, 2004
3NIH	The structure of UBR box (RIAAA) Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RIAAA, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
3NIJ	The structure of UBR box (HIAA) Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide HIAA, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
3NIN	The structure of UBR box (RLGES) Descriptor: E3 ubiquitin-protein ligase UBR1, Peptide RLGES, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
3NIT	The structure of UBR box (native1) Descriptor: E3 ubiquitin-protein ligase UBR1, ZINC ION Authors: Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2010-06-16 Release date: 2010-09-15 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases Nat.Struct.Mol.Biol., 17, 2010
2YZG	Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8 Descriptor: D-alanine--D-alanine ligase Authors: Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2007-05-05 Release date: 2007-11-06 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of D-ALA:D-ALA Ligase from Thermus thermophilus HB8 To be Published
1VWH	STREPTAVIDIN COMPLEXED WITH THE HEAD-TO-TAIL DISULFIDE-BONDED PEPTIDE DIMER OF CYCLO-AC-[CHPQGPPC]-NH2, PH 3.5 Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.48 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
1VWE	STREPTAVIDIN-CYCLO-AC-[CHPQFC]-NH2, PH 3.6 Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.5 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
1VWL	STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 3.5, I222 COMPLEX Descriptor: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.45 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
1VWM	STREPTAVIDIN-CYCLO-AC-[CHPQFC]-NH2, PH 4.2 Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.6 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
1VWQ	STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 2.5, I4122 COMPLEX Descriptor: PENTANOIC ACID, PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997

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