PDB: 79225 resultsInfo pagesStatus searchChemie searchBIRD

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4JI6	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.55 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4JI8	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.742 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4JI4	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.692 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4JI1	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.144 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4JI5	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.85 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4JI7	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.5 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
7ZKI	Cryo-EM structure of aIF1A:aIF5B:Met-tRNAiMet complex from a Pyrococcus abyssi 30S initiation complex Descriptor: MAGNESIUM ION, METHIONINE, Met-tRNAiMet, ... Authors: Coureux, P.D, Bourgeois, G, Mechulam, Y, Schmitt, E, Kazan, R. Deposit date: 2022-04-13 Release date: 2022-07-20 Last modified: 2025-07-09 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Role of aIF5B in archaeal translation initiation. Nucleic Acids Res., 50, 2022
7JSS	ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-II) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Carbone, C.E, Korostelev, A.A. Deposit date: 2020-08-15 Release date: 2020-11-11 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: ArfB can displace mRNA to rescue stalled ribosomes. Nat Commun, 11, 2020
4JI0	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, ZINC ION, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.492 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
7JT3	Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Carbone, C.E, Korostelev, A.A. Deposit date: 2020-08-17 Release date: 2020-11-11 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: ArfB can displace mRNA to rescue stalled ribosomes Nat Commun, 11, 2020
7JT1	70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Carbone, C.E, Korostelev, A.A. Deposit date: 2020-08-16 Release date: 2020-11-11 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: ArfB can displace mRNA to rescue stalled ribosomes Nat Commun, 11, 2020
4JI3	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy, F.V, Murphy, E.L, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.35 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
7JSZ	ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Carbone, C.E, Korostelev, A.A. Deposit date: 2020-08-16 Release date: 2020-11-11 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: ArfB can displace mRNA to rescue stalled ribosomes. Nat Commun, 11, 2020
1BNF	BARNASE T70C/S92C DISULFIDE MUTANT Descriptor: BARNASE Authors: Clarke, J, Henrick, K, Fersht, A.R. Deposit date: 1995-03-31 Release date: 1995-07-10 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2 Å) Cite: Disulfide mutants of barnase. I: Changes in stability and structure assessed by biophysical methods and X-ray crystallography. J.Mol.Biol., 253, 1995
1BNE	BARNASE A43C/S80C DISULFIDE MUTANT Descriptor: BARNASE Authors: Clarke, J, Henrick, K, Fersht, A.R. Deposit date: 1995-03-31 Release date: 1995-07-10 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Disulfide mutants of barnase. I: Changes in stability and structure assessed by biophysical methods and X-ray crystallography. J.Mol.Biol., 253, 1995
1BNG	BARNASE S85C/H102C DISULFIDE MUTANT Descriptor: BARNASE Authors: Clarke, J, Henrick, K, Fersht, A.R. Deposit date: 1995-03-31 Release date: 1995-07-10 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Disulfide mutants of barnase. I: Changes in stability and structure assessed by biophysical methods and X-ray crystallography. J.Mol.Biol., 253, 1995
4JI2	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (3.64 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
7JT2	70S ribosome stalled on long mRNA with ArfB bound in the A site Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Carbone, C.E, Korostelev, A.A. Deposit date: 2020-08-16 Release date: 2020-11-11 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: ArfB can displace mRNA to rescue stalled ribosomes Nat Commun, 11, 2020
6I3O	Crystal structure of DEAH-box ATPase Prp22 Descriptor: Putative pre-mRNA splicing factor Authors: Hamann, F, Ficner, R. Deposit date: 2018-11-07 Release date: 2019-03-06 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (3.25 Å) Cite: Structural basis for RNA translocation by DEAH-box ATPases. Nucleic Acids Res., 47, 2019
7JSW	ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III) Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Carbone, C.E, Korostelev, A.A. Deposit date: 2020-08-16 Release date: 2020-11-11 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: ArfB can displace mRNA to rescue stalled ribosomes. Nat Commun, 11, 2020
4MGN	Co-crystal structure of the G. kaustophilus glyQS T box riboswitch Stem I in complex with tRNA Descriptor: MAGNESIUM ION, glyQS T box riboswitch, tRNA-glycine Authors: Grigg, J.C, Ke, A. Deposit date: 2013-08-28 Release date: 2013-10-23 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural Determinants for Geometry and Information Decoding of tRNA by T Box Leader RNA. Structure, 21, 2013
5YKI	Crystal structure of the engineered nine-repeat PUF domain in complex with cognate 9nt-RNA Descriptor: Pumilio homolog 1, RNA (5'-R(*UP*GP*UP*UP*GP*UP*AP*UP*A)-3') Authors: Zhao, Y.Y, Wang, J, Li, H.T, Wang, Z.X, Wu, J.W. Deposit date: 2017-10-14 Release date: 2018-03-14 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Expanding RNA binding specificity and affinity of engineered PUF domains. Nucleic Acids Res., 46, 2018
5LSO	Crystal structure of SPF45 UHM domain with cyclic peptide inhibitor Descriptor: LYS-SER-ARG-TRP-ASP-GLU, Splicing factor 45 Authors: Jagtap, P.K.A, Garg, D, Sattler, M. Deposit date: 2016-09-05 Release date: 2016-10-26 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.22 Å) Cite: Rational Design of Cyclic Peptide Inhibitors of U2AF Homology Motif (UHM) Domains To Modulate Pre-mRNA Splicing. J. Med. Chem., 59, 2016
4MGM	Crystal structure of the in vitro transcribed G. kaustophilus tRNA-Gly Descriptor: MAGNESIUM ION, tRNA glycine Authors: Grigg, J.C, Ke, A. Deposit date: 2013-08-28 Release date: 2013-10-23 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural Determinants for Geometry and Information Decoding of tRNA by T Box Leader RNA. Structure, 21, 2013
8IPM	The structure of human mitochondrial methyltransferase METTL15 with h44_RNA, RBFA and SAM Descriptor: 12S rRNA N4-methylcytidine (m4C) methyltransferase, Putative ribosome-binding factor A, mitochondrial, ... Authors: Lv, M.Q, Zhou, W.W. Deposit date: 2023-03-14 Release date: 2024-01-03 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural insights into the specific recognition of mitochondrial ribosome-binding factor hsRBFA and 12 S rRNA by methyltransferase METTL15. Cell Discov, 10, 2024

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