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1DG9
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BU of 1dg9 by Molmil
CRYSTAL STRUCTURE OF BOVINE LOW MOLECULAR WEIGHT PTPASE COMPLEXED WITH HEPES
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TYROSINE PHOSPHATASE
Authors:Zhang, M, Zhou, M, Van Etten, R.L, Stauffacher, C.V.
Deposit date:1999-11-23
Release date:1999-12-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of bovine low molecular weight phosphotyrosyl phosphatase complexed with the transition state analog vanadate.
Biochemistry, 36, 1997
3QWO
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BU of 3qwo by Molmil
Crystal structure of a motavizumab epitope-scaffold bound to motavizumab Fab
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, motavizumab epitope scaffold, ...
Authors:McLellan, J.S, Kwong, P.D.
Deposit date:2011-02-28
Release date:2011-05-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design and characterization of epitope-scaffold immunogens that present the motavizumab epitope from respiratory syncytial virus.
J.Mol.Biol., 409, 2011
258L
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BU of 258l by Molmil
AN ADAPTABLE METAL-BINDING SITE ENGINEERED INTO T4 LYSOZYME
Descriptor: CHLORIDE ION, LYSOZYME, ZINC ION
Authors:Wray, J.W, Baase, W.A, Ostheimer, G.J, Matthews, B.W.
Deposit date:1999-01-05
Release date:2000-09-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Use of a non-rigid region in T4 lysozyme to design an adaptable metal-binding site.
Protein Eng., 13, 2000
1IAC
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BU of 1iac by Molmil
REFINED 1.8 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF ASTACIN, A ZINC-ENDOPEPTIDASE FROM THE CRAYFISH ASTACUS ASTACUS L. STRUCTURE DETERMINATION, REFINEMENT, MOLECULAR STRUCTURE AND COMPARISON WITH THERMOLYSIN
Descriptor: ASTACIN, MERCURY (II) ION
Authors:Gomis-Rueth, F.-X, Stoecker, W, Bode, W.
Deposit date:1994-05-09
Release date:1994-08-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Refined 1.8 A X-ray crystal structure of astacin, a zinc-endopeptidase from the crayfish Astacus astacus L. Structure determination, refinement, molecular structure and comparison with thermolysin.
J.Mol.Biol., 229, 1993
4G7F
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BU of 4g7f by Molmil
Crystal Structure of Enolase from Trypanosoma Cruzi
Descriptor: 1,2-ETHANEDIOL, Enolase, MAGNESIUM ION
Authors:Craig, T.K, Edwards, T.E, Staker, B, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-07-20
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Enolase from Trypanosoma Cruzi
To be Published
1ICE
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BU of 1ice by Molmil
STRUCTURE AND MECHANISM OF INTERLEUKIN-1BETA CONVERTING ENZYME
Descriptor: INTERLEUKIN-1 BETA CONVERTING ENZYME, TETRAPEPTIDE ALDEHYDE
Authors:Wilson, K.P, Griffith, J.P, Kim, E.E, Navia, M.A.
Deposit date:1994-09-29
Release date:1995-07-28
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and mechanism of interleukin-1 beta converting enzyme.
Nature, 370, 1994
2JN5
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BU of 2jn5 by Molmil
Solution Structure of a Dodecapeptide from Alpha-Synuclein Bound with Synphilin-1
Descriptor: Alpha-synuclein
Authors:Zhou, C.J, Hu, H.Y, Lin, D.H.
Deposit date:2006-12-28
Release date:2008-01-22
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.
Faseb J., 24, 2010
3AOK
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BU of 3aok by Molmil
Crystal structure of sweet-tasting protein thaumatin II
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin-2
Authors:Masuda, T, Mikami, B, Kitabatake, N.
Deposit date:2010-10-01
Release date:2011-07-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystal structure of the sweet-tasting protein thaumatin II at 1.27A
Biochem.Biophys.Res.Commun., 410, 2011
3R2Y
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BU of 3r2y by Molmil
MK2 kinase bound to Compound 1
Descriptor: 2-(2-QUINOLIN-3-YLPYRIDIN-4-YL)-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE, MALONATE ION, MAP kinase-activated protein kinase 2
Authors:Oubrie, A, Leonard, P.
Deposit date:2011-03-15
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure-based lead identification of ATP-competitive MK2 inhibitors.
Bioorg.Med.Chem.Lett., 21, 2011
3AOX
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BU of 3aox by Molmil
X-ray crystal structure of human anaplastic lymphoma kinase in complex with CH5424802
Descriptor: 1,2-ETHANEDIOL, 9-ethyl-6,6-dimethyl-8-[4-(morpholin-4-yl)piperidin-1-yl]-11-oxo-6,11-dihydro-5H-benzo[b]carbazole-3-carbonitrile, ALK tyrosine kinase receptor
Authors:Nagel, S, Moertl, M, Jestel, A, Fukami, T.A.
Deposit date:2010-10-08
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:CH5424802, a selective ALK inhibitor capable of blocking the resistant gatekeeper mutant
Cancer Cell, 19, 2011
4FTD
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BU of 4ftd by Molmil
Crystal structure of a DUF4623 family protein (BACEGG_03550) from Bacteroides eggerthii DSM 20697 at 1.91 A resolution
Descriptor: GLYCEROL, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2012-06-27
Release date:2012-08-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of a hypothetical protein (BACEGG_03550) from Bacteroides eggerthii DSM 20697 at 1.91 A resolution (CASP Target)
To be Published
2JMR
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BU of 2jmr by Molmil
NMR structure of the E. coli type 1 pilus subunit FimF
Descriptor: fimF
Authors:Gossert, A.D, Bettendorff, P, Puorger, C, Vetsch, M, Herrmann, T, Fiorito, F, Hiller, S, Glockshuber, R, Wuthrich, K.
Deposit date:2006-11-29
Release date:2007-10-30
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:NMR structure of the Escherichia coli type 1 pilus subunit FimF and its interactions with other pilus subunits.
J.Mol.Biol., 375, 2008
5SRY
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BU of 5sry by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with Z5265428218
Descriptor: 1-[(7-fluoro-9H-pyrimido[4,5-b]indol-4-yl)amino]pyrrolidin-2-one, Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-06-09
Release date:2022-07-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Iterative computational design and crystallographic screening identifies potent inhibitors targeting the Nsp3 macrodomain of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 120, 2023
4G1B
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BU of 4g1b by Molmil
X-ray structure of yeast flavohemoglobin in complex with econazole
Descriptor: 1-[(2S)-2-[(4-CHLOROBENZYL)OXY]-2-(2,4-DICHLOROPHENYL)ETHYL]-1H-IMIDAZOLE, FLAVIN-ADENINE DINUCLEOTIDE, Flavohemoglobin, ...
Authors:El Hammi, E, Warkentin, E, Demmer, U, Baciou, L, Ermler, U.
Deposit date:2012-07-10
Release date:2012-11-14
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Active site analysis of yeast flavohemoglobin based on its structure with a small ligand or econazole.
Febs J., 279, 2012
1R2R
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BU of 1r2r by Molmil
CRYSTAL STRUCTURE OF RABBIT MUSCLE TRIOSEPHOSPHATE ISOMERASE
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
Authors:Aparicio, R, Ferreira, S.T, Polikarpov, I.
Deposit date:2003-09-29
Release date:2003-12-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Closed conformation of the active site loop of rabbit muscle triosephosphate isomerase in the absence of substrate: evidence of conformational heterogeneity.
J.Mol.Biol., 334, 2003
3R0X
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BU of 3r0x by Molmil
Crystal structure of Selenomethionine incorporated apo D-serine deaminase from Salmonella tyhimurium
Descriptor: 1,2-ETHANEDIOL, D-serine dehydratase, SODIUM ION, ...
Authors:Bharath, S.R, Shveta, B, Savithri, H.S, Murthy, M.R.N.
Deposit date:2011-03-09
Release date:2011-06-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of open and closed forms of D-serine deaminase from Salmonella typhimurium - implications on substrate specificity and catalysis
Febs J., 2011
5SOW
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BU of 5sow by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ZINC000118179920
Descriptor: 1-{2-[(9H-purin-6-yl)sulfanyl]ethyl}pyrrolidin-2-one, Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-06-09
Release date:2022-07-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Iterative computational design and crystallographic screening identifies potent inhibitors targeting the Nsp3 macrodomain of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 120, 2023
5SPN
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BU of 5spn by Molmil
PanDDA analysis group deposition -- Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with FRESH00010608284
Descriptor: 1-cyclopentyl-3-methyl-N-(1H-pyrrolo[2,3-b]pyridin-5-yl)-1H-pyrazole-5-sulfonamide, Non-structural protein 3
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-06-09
Release date:2022-07-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Iterative computational design and crystallographic screening identifies potent inhibitors targeting the Nsp3 macrodomain of SARS-CoV-2.
Proc.Natl.Acad.Sci.USA, 120, 2023
5SET
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BU of 5set by Molmil
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH c1(cc(nn1C)c2ccccn2)NC(=O)c3c(ccc(n3)C4CC4)Nc5cncnc5, micromolar IC50=>1.66968
Descriptor: 6-cyclopropyl-N-[1-methyl-3-(pyridin-2-yl)-1H-pyrazol-5-yl]-3-[(pyrimidin-5-yl)amino]pyridine-2-carboxamide, MAGNESIUM ION, ZINC ION, ...
Authors:Joseph, C, Groebke-Zbinden, K, Benz, J, Schlatter, D, Rudolph, M.G.
Deposit date:2022-01-21
Release date:2022-10-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A high quality, industrial data set for binding affinity prediction: performance comparison in different early drug discovery scenarios.
J.Comput.Aided Mol.Des., 36, 2022
4KTN
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BU of 4ktn by Molmil
Dna gyrase atp binding domain of enterococcus faecalis in complex with a small molecule inhibitor ((3S)-1-[2-(PYRIDO[2,3-B]PYRAZIN-7-YLSULFANYL)-9H-PYRIMIDO[4,5-B]INDOL-4-YL]PYRROLIDIN-3-AMINE)
Descriptor: (3S)-1-[2-(pyrido[2,3-b]pyrazin-7-ylsulfanyl)-9H-pyrimido[4,5-b]indol-4-yl]pyrrolidin-3-amine, DNA gyrase subunit B
Authors:Bensen, D.C, Akers-rodriguez, S, Tari, L.W.
Deposit date:2013-05-20
Release date:2014-01-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A new class of type iia topoisomerase inhibitors with broad-spectrum antibacterial activity
To be Published
2JII
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BU of 2jii by Molmil
Structure of vaccinia related kinase 3
Descriptor: 1,2-ETHANEDIOL, SERINE/THREONINE-PROTEIN KINASE VRK3 MOLECULE: VACCINIA RELATED KINASE 3
Authors:Bunkoczi, G, Eswaran, J, Pike, A.C.W, Uppenberg, J, Ugochukwu, E, von Delft, F, Cooper, C, Salah, E, Savitsky, P, Burgess-Brown, N, Keates, T, Fedorov, O, Sobott, F, Arrowsmith, C.H, Edwards, A, Sundstrom, M, Weigelt, J, Knapp, S.
Deposit date:2007-06-28
Release date:2007-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the pseudokinase VRK3 reveals a degraded catalytic site, a highly conserved kinase fold, and a putative regulatory binding site.
Structure, 17, 2009
259L
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BU of 259l by Molmil
AN ADAPTABLE METAL-BINDING SITE ENGINEERED INTO T4 LYSOZYME
Descriptor: CHLORIDE ION, COBALT (II) ION, PROTEIN (LYSOZYME)
Authors:Wray, J.W, Baase, W.A, Ostheimer, G.J, Matthews, B.W.
Deposit date:1999-02-10
Release date:1999-04-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Use of a non-rigid region in T4 lysozyme to design an adaptable metal-binding site.
Protein Eng., 13, 2000
3V9M
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BU of 3v9m by Molmil
Phospholipase ACII4 from Australian King Brown Snake
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Guddat, L.W, Millers, E.K.
Deposit date:2011-12-27
Release date:2013-02-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.563 Å)
Cite:Mechanistic studies on the anticoagulant activity of a phospholipase A2 from the venom of the Australian King Brown Snake (Pseudechis australis)
To be Published
2EP8
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BU of 2ep8 by Molmil
Solution structure of the BRCT domain from human Pescadillo homolog 1
Descriptor: Pescadillo homolog 1
Authors:Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-29
Release date:2007-10-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the BRCT domain from human Pescadillo homolog 1
To be Published
3ARA
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BU of 3ara by Molmil
Discovery of Novel Uracil Derivatives as Potent Human dUTPase Inhibitors
Descriptor: 1-[3-({(2R)-2-[hydroxy(diphenyl)methyl]pyrrolidin-1-yl}sulfonyl)propyl]pyrimidine-2,4(1H,3H)-dione, Deoxyuridine 5'-triphosphate nucleotidohydrolase, MAGNESIUM ION
Authors:Chong, K.T, Miyakoshi, H, Miyahara, S, Fukuoka, M.
Deposit date:2010-11-25
Release date:2010-12-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthesis and discovery of N-carbonylpyrrolidine- or N-sulfonylpyrrolidine-containing uracil derivatives as potent human deoxyuridine triphosphatase inhibitors
J.Med.Chem., 55, 2012

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