Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5HDN
DownloadVisualize
BU of 5hdn by Molmil
Crystal structure of heat shock factor1-DBD complex with ds-DNA and TtT
Descriptor: CITRIC ACID, DNA (5'-D(*GP*GP*TP*TP*CP*TP*AP*GP*AP*AP*CP*C)-3'), Heat shock factor protein 1, ...
Authors:Feng, H, Liu, W, Wang, D.C.
Deposit date:2016-01-05
Release date:2017-01-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:HSF1-DBD crystal structure
To Be Published
4R7U
DownloadVisualize
BU of 4r7u by Molmil
Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Vibrio cholerae in complex with substrate UDP-N-acetylglucosamine and the drug fosfomycin
Descriptor: SODIUM ION, TETRAETHYLENE GLYCOL, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ...
Authors:Nocek, B, Maltseva, N, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2014-08-28
Release date:2014-09-24
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Vibrio cholerae in complex with substrate UDP-N-acetylglucosamine and the drug fosfomycin
To be Published
4MWR
DownloadVisualize
BU of 4mwr by Molmil
Anhui N9-zanamivir
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuraminidase, ...
Authors:Wu, Y, Qi, J.X, Gao, F, Gao, G.F.
Deposit date:2013-09-25
Release date:2013-11-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Characterization of two distinct neuraminidases from avian-origin human-infecting H7N9 influenza viruses
Cell Res., 23, 2013
1NJI
DownloadVisualize
BU of 1nji by Molmil
Structure of chloramphenicol bound to the 50S ribosomal subunit
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10e, 50S ribosomal protein L13P, ...
Authors:Hansen, J.L, Moore, P.B, Steitz, T.A.
Deposit date:2002-12-31
Release date:2003-07-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
6IWG
DownloadVisualize
BU of 6iwg by Molmil
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with N-myristoylated 4-mer lipopeptide derived from SIV nef protein
Descriptor: 1,2-ETHANEDIOL, BORIC ACID, Beta-2-microglobulin, ...
Authors:Yamamoto, Y, Morita, D, Sugita, M.
Deposit date:2018-12-05
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification and Structure of an MHC Class I-Encoded Protein with the Potential to PresentN-Myristoylated 4-mer Peptides to T Cells.
J Immunol., 202, 2019
3MMO
DownloadVisualize
BU of 3mmo by Molmil
Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with cyanide
Descriptor: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Trofimov, A.A, Polyakov, K.M, Boyko, K.M, Tikhonova, T.V, Lamzin, V.S, Bourenkov, G.P, Popov, V.O.
Deposit date:2010-04-20
Release date:2010-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of complexes of octahaem cytochrome c nitrite reductase from Thioalkalivibrio nitratireducens with sulfite and cyanide.
Acta Crystallogr.,Sect.D, 66, 2010
4MKK
DownloadVisualize
BU of 4mkk by Molmil
Crystal structure of C115A mutant L-methionine gamma-lyase from Citrobacter freundii modified by allicine
Descriptor: CHLORIDE ION, Methionine gamma-lyase, POTASSIUM ION, ...
Authors:Revtovich, S.V, Nikulin, A.D, Morozova, E.A, Zakomirdina, L.N, Demidkina, T.V.
Deposit date:2013-09-05
Release date:2014-11-12
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Alliin is a suicide substrate of Citrobacter freundii methionine gamma-lyase: structural bases of inactivation of the enzyme.
Acta Crystallogr.,Sect.D, 70, 2014
5I3L
DownloadVisualize
BU of 5i3l by Molmil
DPF3b in complex with H3K14ac peptide
Descriptor: 1,2-ETHANEDIOL, H3K14ac peptide, SODIUM ION, ...
Authors:Tempel, W, Liu, Y, Walker, J.R, Zhao, A, Qin, S, Loppnau, P, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2016-02-10
Release date:2016-02-24
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of DPF3b in complex with an acetylated histone peptide.
J.Struct.Biol., 195, 2016
4MWX
DownloadVisualize
BU of 4mwx by Molmil
Shanghai N9-zanamivir
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neuraminidase, ...
Authors:Wu, Y, Qi, J.X, Gao, F, Gao, G.F.
Deposit date:2013-09-25
Release date:2013-11-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Characterization of two distinct neuraminidases from avian-origin human-infecting H7N9 influenza viruses
Cell Res., 23, 2013
2OAJ
DownloadVisualize
BU of 2oaj by Molmil
Crystal structure of Sro7 from S. cerevisiae
Descriptor: Protein SNI1, SODIUM ION, ZINC ION
Authors:Hattendorf, D.A, Weis, W.I.
Deposit date:2006-12-15
Release date:2007-04-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the yeast polarity protein Sro7 reveals a SNARE regulatory mechanism.
Nature, 446, 2007
8QTF
DownloadVisualize
BU of 8qtf by Molmil
Crystal structure of a C-terminally truncated version of Arabidopsis thaliana 14-3-3 omega in complex with a phosphopeptide from the transcription factor BZR1.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 14-3-3-like protein GF14 omega, ...
Authors:Hothorn, M, Obergfell, E.
Deposit date:2023-10-12
Release date:2023-11-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanistic insights into the function of 14-3-3 proteins as negative regulators of brassinosteroid signaling in Arabidopsis.
Plant Cell.Physiol., 2024
5JEA
DownloadVisualize
BU of 5jea by Molmil
Structure of a cytoplasmic 11-subunit RNA exosome complex including Ski7, bound to RNA
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Exosome complex component CSL4, Exosome complex component MTR3, ...
Authors:Kowalinski, E, Ebert, J, Stegmann, E, Conti, E.
Deposit date:2016-04-18
Release date:2016-07-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of a Cytoplasmic 11-Subunit RNA Exosome Complex.
Mol.Cell, 63, 2016
4E6K
DownloadVisualize
BU of 4e6k by Molmil
2.0 A resolution structure of Pseudomonas aeruginosa bacterioferritin (BfrB) in complex with bacterioferritin associated ferredoxin (Bfd)
Descriptor: Bacterioferritin, FE2/S2 (INORGANIC) CLUSTER, PHOSPHATE ION, ...
Authors:Lovell, S, Battaile, K.P, Yao, H, Wang, Y, Kumar, R, Ruvinsky, A, Vasker, I, Rivera, M.
Deposit date:2012-03-15
Release date:2012-08-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Structure of the BfrB-Bfd Complex Reveals Protein-Protein Interactions Enabling Iron Release from Bacterioferritin.
J.Am.Chem.Soc., 134, 2012
5JG1
DownloadVisualize
BU of 5jg1 by Molmil
HIV-1 wild Type protease with GRL-031-14A (a Adamantane P1-Ligand with tetrahydropyrano-tetrahydrofuran in P2 and isobutylamine in P1')
Descriptor: (3R,3aS,7aR)-hexahydro-4H-furo[2,3-b]pyran-3-yl {(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]butan-2-yl}carbamate, CHLORIDE ION, GLYCEROL, ...
Authors:Wang, Y.-F, Agniswamy, J, Weber, I.T.
Deposit date:2016-04-19
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Probing Lipophilic Adamantyl Group as the P1-Ligand for HIV-1 Protease Inhibitors: Design, Synthesis, Protein X-ray Structural Studies, and Biological Evaluation.
J.Med.Chem., 59, 2016
2ORF
DownloadVisualize
BU of 2orf by Molmil
Directing Macromolecular Conformation Through Halogen Bonds
Descriptor: DNA (5'-D(*CP*CP*GP*AP*TP*AP*CP*CP*GP*G)-3'), DNA (5'-D(*CP*CP*GP*GP*TP*AP*(BRU)P*CP*GP*G)-3'), SODIUM ION
Authors:Voth, A.R, Hays, F.A, Ho, P.S.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Directing macromolecular conformation through halogen bonds.
Proc.Natl.Acad.Sci.Usa, 104, 2007
5HKW
DownloadVisualize
BU of 5hkw by Molmil
Crystal Structure of Apo c-Cbl TKBD Refined to 2.25 A Resolution
Descriptor: E3 ubiquitin-protein ligase CBL, SODIUM ION
Authors:Lovell, S, Battaile, K.P, Mehzabeen, N, Zhang, N, Cooper, A, Gao, P, Perez, R.P.
Deposit date:2016-01-14
Release date:2017-01-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Apo c-Cbl TKBD Refined to 2.25 A Resolution
To be published
4LMK
DownloadVisualize
BU of 4lmk by Molmil
GLIC Liganded-closed-channel Conformation, Mutant Y27'A
Descriptor: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ...
Authors:Grosman, C, Gonzalez-Gutierrez, G.
Deposit date:2013-07-10
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.22 Å)
Cite:Gating of the proton-gated ion channel from Gloeobacter violaceus at pH 4 as revealed by X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 110, 2013
4LMJ
DownloadVisualize
BU of 4lmj by Molmil
GLIC Liganded-closed-channel Conformation, Mutant T25'A
Descriptor: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ...
Authors:Grosman, C, Gonzalez-Gutierrez, G.
Deposit date:2013-07-10
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:Gating of the proton-gated ion channel from Gloeobacter violaceus at pH 4 as revealed by X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 110, 2013
6HP8
DownloadVisualize
BU of 6hp8 by Molmil
Crystal structure of DPP8 in complex with Val-BoroPro
Descriptor: Dipeptidyl peptidase 8, GLYCEROL, SODIUM ION, ...
Authors:Ross, B.H, Huber, R.
Deposit date:2018-09-19
Release date:2019-07-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Improvement of Protein Crystal Diffraction Using Post-Crystallization Methods: Infrared Laser Radiation Controls Crystal Order
Thesis, 2019
6J6W
DownloadVisualize
BU of 6j6w by Molmil
Mutant K23N of heat shock factor 4-DBD
Descriptor: Heat shock factor protein 4, NITRATE ION, SODIUM ION
Authors:Xiao, Z.Y, Cui, L.W, Wang, S, Liu, W.
Deposit date:2019-01-16
Release date:2020-01-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.693 Å)
Cite:Structure of the mutant K23N of heat shock factor 4-DBD at 1.69 Angstroms resolution.
To Be Published
4CDU
DownloadVisualize
BU of 4cdu by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP3
Descriptor: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-06
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
4QKU
DownloadVisualize
BU of 4qku by Molmil
Crystal structure of a putative hydrolase from Burkholderia cenocepacia
Descriptor: 1,2-ETHANEDIOL, SODIUM ION, SULFATE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-06-09
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of a putative hydrolase from Burkholderia cenocepacia
To be Published
7C0K
DownloadVisualize
BU of 7c0k by Molmil
Crystal structure of a dinucleotide-binding protein of ABC transporter endogenously bound to uridylyl-3'-5'-phospho-guanosine (Form II)
Descriptor: 1,2-ETHANEDIOL, 1,3-PROPANDIOL, 2-HYDROXY BUTANE-1,4-DIOL, ...
Authors:Kanaujia, S.P, Chandravanshi, M.
Deposit date:2020-05-01
Release date:2021-03-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and thermodynamic insights into the novel dinucleotide-binding protein of ABC transporter unveils its moonlighting function.
Febs J., 288, 2021
4QN4
DownloadVisualize
BU of 4qn4 by Molmil
Crystal structure of Neuraminidase N6
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Sun, X, Li, Q, Wu, Y, Liu, Y, Qi, J, Vavricka, C.J, Gao, G.F.
Deposit date:2014-06-17
Release date:2014-07-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of influenza virus N7: the last piece of the neuraminidase "jigsaw" puzzle.
J.Virol., 88, 2014
7BYD
DownloadVisualize
BU of 7byd by Molmil
Crystal structure of SN45 TCR in complex with lipopeptide-bound Mamu-B*05104
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, B protein, ...
Authors:Morita, D, Sugita, M, Iwashita, C.
Deposit date:2020-04-22
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.80003262 Å)
Cite:Crystal structure of the ternary complex of TCR, MHC class I and lipopeptides.
Int.Immunol., 32, 2020

222415

건을2024-07-10부터공개중

PDB statisticsPDBj update infoContact PDBjnumon