Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2NU5
DownloadVisualize
BU of 2nu5 by Molmil
Crystal structure of a complex of griffithsin cocrystallized with N-acetylglucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, griffithsin
Authors:Ziolkowska, N.E, Wlodawer, A.
Deposit date:2006-11-08
Release date:2007-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.564 Å)
Cite:Crystallographic studies of the complexes of antiviral protein griffithsin with glucose and N-acetylglucosamine
Protein Sci., 16, 2007
1JXM
DownloadVisualize
BU of 1jxm by Molmil
CRYSTAL STRUCTURE OF THE GMP BOUND SH3-HOOK-GK FRAGMENT OF PSD-95
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GUANIDINE, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Tavares, G.A, Panepucci, E.H, Brunger, A.T.
Deposit date:2001-09-07
Release date:2002-01-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural characterization of the intramolecular interaction between the SH3 and guanylate kinase domains of PSD-95.
Mol.Cell, 8, 2001
5ACQ
DownloadVisualize
BU of 5acq by Molmil
W228A-Investigation of the impact from residues W228 and Y233 in the metallo-beta-lactamase GIM-1
Descriptor: BETA-LACTAMASE, ZINC ION
Authors:Skagseth, S, Carlsen, T.J, Bjerga, G.E.K, Spencer, J, Samuelsen, O, Leiros, H.-K.S.
Deposit date:2015-08-17
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Role of Residues W228 and Y233 in the Structure and Activity of Metallo-Beta-Lactamase Gim-1.
Antimicrob.Agents Chemother., 60, 2015
2NUF
DownloadVisualize
BU of 2nuf by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 2.5-Angstrom Resolution
Descriptor: 28-MER, MAGNESIUM ION, Ribonuclease III
Authors:Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
Deposit date:2006-11-09
Release date:2007-11-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
2VPP
DownloadVisualize
BU of 2vpp by Molmil
Drosophila melanogaster deoxyribonucleoside kinase successfully activates gemcitabine in transduced cancer cell lines
Descriptor: DEOXYNUCLEOSIDE KINASE, GEMCITABINE, SULFATE ION
Authors:Knecht, W, Mikkelsen, N.E, Clausen, A, Willer, M, Gojkovic, Z, Piskur, J.
Deposit date:2008-03-03
Release date:2009-03-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Drosophila Melanogaster Deoxyribonucleoside Kinase Activates Gemcitabine.
Biochem.Biophys.Res.Commun., 382, 2009
2ECP
DownloadVisualize
BU of 2ecp by Molmil
THE CRYSTAL STRUCTURE OF THE E. COLI MALTODEXTRIN PHOSPHORYLASE COMPLEX
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, GLYCEROL, MALTODEXTRIN PHOSPHORYLASE, ...
Authors:O'Reilly, M, Watson, K.A, Johnson, L.N.
Deposit date:1998-10-27
Release date:1999-06-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The crystal structure of the Escherichia coli maltodextrin phosphorylase-acarbose complex.
Biochemistry, 38, 1999
5A2F
DownloadVisualize
BU of 5a2f by Molmil
Two membrane distal IgSF domains of CD166
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CD166 ANTIGEN
Authors:Chappell, P.E, Johnson, S, Lea, S.M, Brown, M.H.
Deposit date:2015-05-18
Release date:2015-07-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structures of Cd6 and its Ligand Cd166 Give Insight Into Their Interaction.
Structure, 23, 2015
1OP8
DownloadVisualize
BU of 1op8 by Molmil
Crystal Structure of Human Granzyme A
Descriptor: Granzyme A, SULFATE ION
Authors:Hink-Schauer, C, Estebanez-Perpina, E, Bode, W, Jenne, D.
Deposit date:2003-03-05
Release date:2003-07-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the apoptosis-inducing human granzyme A dimer
NAT.STRUCT.BIOL., 10, 2003
3NHI
DownloadVisualize
BU of 3nhi by Molmil
Crystal structure of the AnSt-D7L1-leukotriene C4 complex
Descriptor: (5S,7E,9E,11Z,14Z)-5-hydroxyicosa-7,9,11,14-tetraenoic acid, D7 protein, GLYCEROL, ...
Authors:Andersen, J.F, Alvarenga, P.H, Francischetti, I.M, Calvo, E, Sa-Nunes, A, Ribeiro, J.M.
Deposit date:2010-06-14
Release date:2010-12-29
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:The function and three-dimensional structure of a thromboxane a(2)/cysteinyl leukotriene-binding protein from the saliva of a mosquito vector of the malaria parasite.
Plos Biol., 8, 2010
5AF9
DownloadVisualize
BU of 5af9 by Molmil
Thrombin in complex with 4-Methoxy-N-(2-pyridinyl)benzamide
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-methoxy-N-(pyridin-2-yl)benzamide, ...
Authors:Ruehmann, E, Heine, A, Klebe, G.
Deposit date:2015-01-20
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why.
J.Med.Chem., 58, 2015
2VP9
DownloadVisualize
BU of 2vp9 by Molmil
Structural Studies of Nucleoside Analog and Feedback Inhibitor Binding to Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase
Descriptor: 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, DEOXYNUCLEOSIDE KINASE, SULFATE ION
Authors:Mikkelsen, N.E, Munch-Petersen, B, Eklund, H.
Deposit date:2008-02-27
Release date:2008-04-29
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Studies of Nucleoside Analog and Feedback Inhibitor Binding to Drosophila Melanogaster Multisubstrate Deoxyribonucleoside Kinase.
FEBS J., 275, 2008
5EDT
DownloadVisualize
BU of 5edt by Molmil
Crystal structure of Mycobacterium tuberculosis CYP121 in complex with LIG9
Descriptor: 2-azanyl-5-chloranyl-benzamide, Cytochrome P450 121, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kavanagh, M.E, Coyne, A.G, McLean, K.J, James, G.G, Levy, C, Marino, L.B, Carvalho, L.P.D, Chan, D.S.H, Hudson, S.A, Surade, S, Munro, A.W, Abell, C.
Deposit date:2015-10-22
Release date:2016-04-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Fragment-Based Approaches to the Development of Mycobacterium tuberculosis CYP121 Inhibitors.
J.Med.Chem., 59, 2016
5AG0
DownloadVisualize
BU of 5ag0 by Molmil
DyP-type peroxidase of Auricularia auricula-judae (AauDyPI) crystallized at pH 6.5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CACODYLATE ION, DYE-DECOLORIZING PEROXIDASE, ...
Authors:Strittmatter, E, Piontek, K, Plattner, D.A.
Deposit date:2015-01-27
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystallographic Trapping of a Covalently Modified Heme in a Dye-Decolorizing Peroxidase
To be Published
5AFX
DownloadVisualize
BU of 5afx by Molmil
T. Brucei Farnesyl Diphosphate Synthase Complexed with Bisphosphonate BPH-1238
Descriptor: FARNESYL PYROPHOSPHATE SYNTHASE, MAGNESIUM ION, [1-hydroxy-2-(1-nonyl-1H-3lambda~5~-imidazol-3-yl)ethane-1,1-diyl]bis(phosphonic acid)
Authors:Yang, G, Oldfield, E, No, J.H.
Deposit date:2015-01-27
Release date:2015-10-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Inhibition of Trypanosoma Brucei Cell Growth by Lipophilic Bisphosphonates: An in Vitro and in Vivo Investigation.
Antimicrob.Agents Chemother., 59, 2015
3DVE
DownloadVisualize
BU of 3dve by Molmil
Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, NICKEL (II) ION, ...
Authors:Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
7DGR
DownloadVisualize
BU of 7dgr by Molmil
Activity optimized supercomplex state2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
2NX0
DownloadVisualize
BU of 2nx0 by Molmil
Ferrous nitrosyl blackfin tuna myoglobin
Descriptor: Myoglobin, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Schreiter, E.R, Rodriguez, M.M, Weichsel, A, Montfort, W.R, Bonaventura, J.
Deposit date:2006-11-16
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:S-nitrosylation-induced conformational change in blackfin tuna myoglobin.
J.Biol.Chem., 282, 2007
2O1U
DownloadVisualize
BU of 2o1u by Molmil
Structure of full length GRP94 with AMP-PNP bound
Descriptor: Endoplasmin, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Dollins, D.E, Warren, J.J, Immormino, R.M, Gewirth, D.T.
Deposit date:2006-11-29
Release date:2007-10-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of GRP94-Nucleotide Complexes Reveal Mechanistic Differences between the hsp90 Chaperones.
Mol.Cell, 28, 2007
1Y5X
DownloadVisualize
BU of 1y5x by Molmil
tRNA-guanine Transglycosylase (TGT) in complex with 6-Amino-4-[2-(4-methoxyphenyl)ethyl]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one
Descriptor: 6-AMINO-4-[2-(4-METHOXYPHENYL)ETHYL]-1,7-DIHYDRO-8H-IMIDAZO[4,5-G]QUINAZOLIN-8-ONE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Stengl, B, Meyer, E.A, Heine, A, Brenk, R, Diederich, F, Klebe, G.
Deposit date:2004-12-03
Release date:2005-12-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of tRNA-guanine transglycosylase (TGT) in complex with novel and potent inhibitors unravel pronounced induced-fit adaptations and suggest dimer formation upon substrate binding
J.Mol.Biol., 370, 2007
7DGQ
DownloadVisualize
BU of 7dgq by Molmil
Activity optimized supercomplex state1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (5 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
3DVM
DownloadVisualize
BU of 3dvm by Molmil
Crystal Structure of Ca2+/CaM-CaV2.1 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent P/Q-type calcium channel subunit alpha-1A
Authors:Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L.
Deposit date:2008-07-18
Release date:2008-11-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation.
Structure, 16, 2008
7DGZ
DownloadVisualize
BU of 7dgz by Molmil
Activity optimized complex I (closed form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DH0
DownloadVisualize
BU of 7dh0 by Molmil
Activity optimized complex I (open form)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGS
DownloadVisualize
BU of 7dgs by Molmil
Activity optimized supercomplex state3
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
2O35
DownloadVisualize
BU of 2o35 by Molmil
Protein of Unknown Function (DUF1244) from Sinorhizobium meliloti
Descriptor: Hypothetical protein DUF1244, MAGNESIUM ION
Authors:Kim, Y, Joachimiak, A, Evdokimova, E, Kudritska, M, Edwards, A, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-11-30
Release date:2007-01-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The Crystal Structure of Protein of Unknown Function (DUF1244) from Sinorhizobium meliloti
To be Published

226707

건을2024-10-30부터공개중

PDB statisticsPDBj update infoContact PDBjnumon