1VYO
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6XND
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![BU of 6xnd by Molmil](/molmil-images/mine/6xnd) | Avidin-Biotin-Phenol | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, N-[2-(2-hydroxy-5-nitrophenyl)ethyl]-5-[(3aS,4S,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamide | Authors: | Ahmadvand, P, Kang, C. | Deposit date: | 2020-07-02 | Release date: | 2021-03-03 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (1.58 Å) | Cite: | A Ligand-Directed Nitrophenol Carbonate for Transient in situ Bioconjugation and Drug Delivery Chemmedchem, 15, 2020
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3VGW
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![BU of 3vgw by Molmil](/molmil-images/mine/3vgw) | Crystal structure of monoAc-biotin-avidin complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(3aS,4S,6aR)-1-acetyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid, Avidin, ... | Authors: | Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T. | Deposit date: | 2011-08-21 | Release date: | 2011-12-28 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Rational development of caged-biotin protein-labeling agents and some applications in live cells Chem.Biol., 18, 2011
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3VHI
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![BU of 3vhi by Molmil](/molmil-images/mine/3vhi) | Crystal structure of monoZ-biotin-avidin complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-{(3aS,4S,6aR)-1-[(benzyloxy)carbonyl]-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl}pentanoic acid, Avidin, ... | Authors: | Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T. | Deposit date: | 2011-08-25 | Release date: | 2011-12-28 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.76 Å) | Cite: | Rational development of caged-biotin protein-labeling agents and some applications in live cells Chem.Biol., 18, 2011
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1NQN
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![BU of 1nqn by Molmil](/molmil-images/mine/1nqn) | Structure of Avm-W110K (W110K mutant of avidin) | Descriptor: | Avidin | Authors: | Pazy, Y, Eisenberg-Domovich, Y, Laitinen, O.H, Kulomaa, M.S, Bayer, E.A, Wilchek, M, Livnah, O. | Deposit date: | 2003-01-22 | Release date: | 2003-07-15 | Last modified: | 2021-10-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Dimer-Tetramer Transition between Solution and Crystalline States of Streptavidin and Avidin Mutants. J.Bacteriol., 185, 2003
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5MYQ
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2JGS
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![BU of 2jgs by Molmil](/molmil-images/mine/2jgs) | Circular permutant of avidin | Descriptor: | BIOTIN, CIRCULAR PERMUTANT OF AVIDIN | Authors: | Maatta, J.A.E, Hytonen, V.P, Airenne, T.T, Niskanen, E, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R. | Deposit date: | 2007-02-14 | Release date: | 2008-03-04 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Rational Modification of Ligand-Binding Preference of Avidin by Circular Permutation and Mutagenesis. Chembiochem, 9, 2008
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4U46
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![BU of 4u46 by Molmil](/molmil-images/mine/4u46) | Crystal structure of an avidin mutant | Descriptor: | Avidin, CHLORIDE ION | Authors: | Agrawal, N, Lehtonen, S, Kahkonen, N, Riihimaki, T, Hytonen, V.P, Kulomaa, M.S, Johnson, M.S, Airenne, T.T. | Deposit date: | 2014-07-23 | Release date: | 2015-08-05 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Artificial Avidin-Based Receptors for a Panel of Small Molecules. Acs Chem.Biol., 11, 2016
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2C4I
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![BU of 2c4i by Molmil](/molmil-images/mine/2c4i) | Crystal structure of engineered avidin | Descriptor: | AVIDIN, BIOTIN, SULFATE ION | Authors: | Hytonen, V.P, Horha, J, Airenne, T.T, Niskanen, E.A, Helttunen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Nordlund, H.R. | Deposit date: | 2005-10-19 | Release date: | 2006-07-05 | Last modified: | 2023-12-13 | Method: | X-RAY DIFFRACTION (1.95 Å) | Cite: | Controlling Quaternary Structure Assembly: Subunit Interface Engineering and Crystal Structure of Dual Chain Avidin. J.Mol.Biol., 359, 2006
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4JHQ
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![BU of 4jhq by Molmil](/molmil-images/mine/4jhq) | Crystal structure of avidin - 6-(6-biotinamidohexanamido)hexanoylferrocene complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, [(1,2,3,4,5-eta)-cyclopentadienyl][(1,2,3,4,5-eta)-{6-[(6-{[5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanoyl]amino}hexanoyl)amino]hexanoyl}cyclopentadienyl]iron | Authors: | Strzelczyk, P, Bujacz, A, Bujacz, G. | Deposit date: | 2013-03-05 | Release date: | 2013-11-20 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.99 Å) | Cite: | Ferrocene-Biotin Conjugates Targeting Cancer Cells: Synthesis, Interaction with Avidin, Cytotoxic Properties and the Crystal Structure of the Complex of Avidin with a Biotin-Linker-Ferrocene Conjugate Organometallics, 32, 2013
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2A8G
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![BU of 2a8g by Molmil](/molmil-images/mine/2a8g) | Structure of Avidin in complex with the ligand deoxyguanosine | Descriptor: | 2'-DEOXY-GUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin | Authors: | Conners, R, Hooley, E, Thomas, S, Brady, R.L. | Deposit date: | 2005-07-08 | Release date: | 2006-05-23 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.99 Å) | Cite: | Recognition of oxidatively modified bases within the biotin-binding site of avidin. J.Mol.Biol., 357, 2006
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3VHM
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![BU of 3vhm by Molmil](/molmil-images/mine/3vhm) | Crystal structure of NPC-biotin-avidin complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(3aS,4R,6aR)-1-{[(1R)-1-(6-nitro-1,3-benzodioxol-5-yl)ethoxy]carbonyl}-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid, Avidin, ... | Authors: | Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T. | Deposit date: | 2011-08-29 | Release date: | 2011-12-28 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Rational development of caged-biotin protein-labeling agents and some applications in live cells Chem.Biol., 18, 2011
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5IRU
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![BU of 5iru by Molmil](/molmil-images/mine/5iru) | Crystal structure of avidin in complex with 1-biotinylpyrene | Descriptor: | 1-biotinylpyrene, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin | Authors: | Strzelczyk, P, Bujacz, G. | Deposit date: | 2016-03-14 | Release date: | 2016-10-12 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural Characterization of the Avidin Interactions with Fluorescent Pyrene-Conjugates: 1-Biotinylpyrene and 1-Desthiobiotinylpyrene. Molecules, 21, 2016
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1IJ8
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![BU of 1ij8 by Molmil](/molmil-images/mine/1ij8) | CRYSTAL STRUCTURE OF LITE AVIDIN-BNI COMPLEX | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE, AVIDIN | Authors: | Livnah, O, Huberman, T. | Deposit date: | 2001-04-25 | Release date: | 2001-09-12 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Chicken avidin exhibits pseudo-catalytic properties. Biochemical, structural, and electrostatic consequences. J.Biol.Chem., 276, 2001
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7ZYL
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![BU of 7zyl by Molmil](/molmil-images/mine/7zyl) | Avidin + Biotin-Tempo | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, Avidin | Authors: | Milani, J, Myasnikov, A, Beckert, B, Nazarov, S, Ansermet, J.P, Saenz, F. | Deposit date: | 2022-05-25 | Release date: | 2023-06-14 | Method: | ELECTRON MICROSCOPY (2.08 Å) | Cite: | Avidin + Biotin-Tempo To Be Published
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5IRW
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7P4Z
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8CK7
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![BU of 8ck7 by Molmil](/molmil-images/mine/8ck7) | Avidin complexed to theophylline | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin, GLYCEROL, ... | Authors: | De March, M. | Deposit date: | 2023-02-14 | Release date: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | The avidin-theophylline complex: A structural and computational study. Proteins, 91, 2023
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2CAM
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![BU of 2cam by Molmil](/molmil-images/mine/2cam) | AVIDIN MUTANT (K3E,K9E,R26D,R124L) | Descriptor: | AVIDIN | Authors: | Rosano, C, Arosio, P, Bolognesi, M. | Deposit date: | 1998-03-27 | Release date: | 1998-07-15 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Biochemical characterization and crystal structure of a recombinant hen avidin and its acidic mutant expressed in Escherichia coli. Eur.J.Biochem., 256, 1998
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1RAV
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![BU of 1rav by Molmil](/molmil-images/mine/1rav) | RECOMBINANT AVIDIN | Descriptor: | AVIDIN | Authors: | Rosano, C, Arosio, P, Bolognesi, M. | Deposit date: | 1998-03-27 | Release date: | 1998-07-15 | Last modified: | 2023-08-09 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Biochemical characterization and crystal structure of a recombinant hen avidin and its acidic mutant expressed in Escherichia coli. Eur.J.Biochem., 256, 1998
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1LDO
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![BU of 1ldo by Molmil](/molmil-images/mine/1ldo) | avidin-norbioitn complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, NORBIOTIN, avidin | Authors: | Pazy, Y, Kulik, T, Bayer, E.A, Wilchek, M, Livnah, O. | Deposit date: | 2002-04-09 | Release date: | 2002-11-06 | Last modified: | 2020-07-29 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Ligand exchange between proteins: exchange of biotin and biotin derivatives between avidin and streptavidin J.Biol.Chem., 277, 2002
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5CHK
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![BU of 5chk by Molmil](/molmil-images/mine/5chk) | Crystal structure of avidin - HABA complex (hexagonal crystal form) | Descriptor: | 2-[2-(4-oxocyclohexa-2,5-dien-1-ylidene)hydrazinyl]benzoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin | Authors: | Strzelczyk, P, Bujacz, A, Bujacz, G. | Deposit date: | 2015-07-10 | Release date: | 2016-03-23 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Crystal structure and ligand affinity of avidin in the complex with 4-hydroxyazobenzene-2-carboxylic acid J.Mol.Struct., 1109, 2016
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3VHH
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![BU of 3vhh by Molmil](/molmil-images/mine/3vhh) | Crystal structure of DiMe-biotin-avidin complex | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-[(3aS,4S,6aR)-1,3-dimethyl-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoic acid, Avidin, ... | Authors: | Terai, T, Maki, E, Sugiyama, S, Takahashi, Y, Matsumura, H, Mori, Y, Nagano, T. | Deposit date: | 2011-08-25 | Release date: | 2011-12-28 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.26 Å) | Cite: | Rational development of caged-biotin protein-labeling agents and some applications in live cells Chem.Biol., 18, 2011
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7ZN1
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![BU of 7zn1 by Molmil](/molmil-images/mine/7zn1) | Avidin + Biotin-Tempo | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 6-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]-~{N}-(2,2,6,6-tetramethyl-1-oxidanyl-piperidin-4-yl)hexanamide, ... | Authors: | Milani, J, Lau, K, Pojer, F, Ansermet, J.P, Saenz, F. | Deposit date: | 2022-04-20 | Release date: | 2023-05-10 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.33 Å) | Cite: | Avidin + Biotin-Tempo To Be Published
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2A5B
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![BU of 2a5b by Molmil](/molmil-images/mine/2a5b) | Avidin complexed with 8-oxodeoxyguanosine | Descriptor: | 2'-DEOXY-8-OXOGUANOSINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Avidin | Authors: | Conners, R, Hooley, E, Thomas, S, Brady, R.L. | Deposit date: | 2005-06-30 | Release date: | 2006-05-23 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (2.49 Å) | Cite: | Recognition of oxidatively modified bases within the biotin-binding site of avidin. J.Mol.Biol., 357, 2006
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