PDB: 91 件ウェブページステータス検索Chemie searchBIRD

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1SVA	SIMIAN VIRUS 40 分子名称: SIMIAN VIRUS 40 著者 Stehle, T, Gamblin, S.J, Harrison, S.C. 登録日 1995-11-27 公開日 1996-06-10 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 The structure of simian virus 40 refined at 3.1 A resolution. Structure, 4, 1996
3QK2	Structure-Based Analysis of the Interaction between the Simian Virus 40 T-Antigen Origin Binding Domain and Single-Stranded DNA 分子名称: Large T antigen, THIOCYANATE ION 著者 Meinke, G, Bullock, P.A, Bohm, A. 登録日 2011-01-31 公開日 2011-02-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.643 Å) 主引用文献 Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA. J.Virol., 85, 2011
3QN2	Structure-based design of a disulfide-linked oligomeric form of the Simian Virus 40 (SV40) large T antigen DNA binding domain 分子名称: CITRATE ANION, Large T antigen 著者 Meinke, G, Bullock, P.A. 登録日 2011-02-07 公開日 2011-06-01 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.661 Å) 主引用文献 Structure-based design of a disulfide-linked oligomeric form of the simian virus 40 (SV40) large T antigen DNA-binding domain. Acta Crystallogr.,Sect.D, 67, 2011
3BWQ	Structure of free SV40 VP1 pentamer 分子名称: Capsid protein VP1 著者 Neu, U, Stehle, T. 登録日 2008-01-10 公開日 2008-03-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of GM1 ganglioside recognition by simian virus 40. Proc.Natl.Acad.Sci.Usa, 105, 2008
3BWR	SV40 VP1 pentamer in complex with GM1 oligosaccharide 分子名称: 1,2-ETHANEDIOL, Capsid protein VP1, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose 著者 Neu, U, Stehle, T. 登録日 2008-01-10 公開日 2008-03-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural basis of GM1 ganglioside recognition by simian virus 40. Proc.Natl.Acad.Sci.Usa, 105, 2008
2ITL	The origin binding domain of the SV40 large T antigen bound to the functional pen palindrome DNA (23 bp) 分子名称: 24-nt PEN element of the SV40 DNA origin, large T antigen 著者 Bochkareva, E, Seitova, A, Bochkarev, A. 登録日 2006-10-19 公開日 2006-12-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA Embo J., 25, 2006
2IPR	Origin binding domain of the SV40 large T antigen (residues 131-259). P21 crystal form 分子名称: large T antigen 著者 Martynowski, D, Bochkareva, E, Bochkarev, A. 登録日 2006-10-12 公開日 2006-12-12 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA Embo J., 25, 2006
2ITJ	Origin binding domain of the SV40 large T antigen (residues 131-259). P212121 crystal form 分子名称: large T antigen 著者 Martynowski, D, Bochkareva, E, Bochkarev, A. 登録日 2006-10-19 公開日 2006-12-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA Embo J., 25, 2006
2NL8	The origin binding domain of the SV40 large T antigen bound non specifically to a 17 bp palindrome DNA (sites 1 and 3) 分子名称: 18-nt PEN element of the SV40 DNA origin, large T antigen 著者 Martynowski, D, Bochkareva, E, Bochkarev, A. 登録日 2006-10-19 公開日 2006-12-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the origin-binding domain of simian virus 40 large T antigen bound to DNA Embo J., 25, 2006
2FUF	Crystal structure of the SV40 large T antigen origin-binding domain 分子名称: CITRATE ANION, Large T antigen 著者 Meinke, G, Bullock, P.A, Bohm, A. 登録日 2006-01-26 公開日 2006-08-22 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal structure of the simian virus 40 large T-antigen origin-binding domain. J.Virol., 80, 2006
1Z1D	Structural Model for the interaction between RPA32 C-terminal domain and SV40 T antigen origin binding domain. 分子名称: Large T antigen, Replication protein A 32 kDa subunit 著者 Arunkumar, A.I, Klimovich, V, Jiang, X, Ott, R.D, Mizoue, L, Fanning, E, Chazin, W.J. 登録日 2005-03-03 公開日 2005-05-17 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Insights into hRPA32 C-terminal domain--mediated assembly of the simian virus 40 replisome. Nat.Struct.Mol.Biol., 12, 2005
4FGN	Crystal structure of the SV40 large T-antigen origin bining domain bound to Site I DNA 分子名称: Large T antigen, Site I DNA 著者 Meinke, G, Bohm, A, Bullock, P.A. 登録日 2012-06-04 公開日 2013-01-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Analysis of the Costructure of the Simian Virus 40 T-Antigen Origin Binding Domain with Site I Reveals a Correlation between GAGGC Spacing and Spiral Assembly. J.Virol., 87, 2013
5D9I	SV40 Large T antigen origin binding domain bound to artificial DNA fork 分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ... 著者 Meinke, G, Bohm, A, Bullock, P.A. 登録日 2015-08-18 公開日 2015-09-09 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA. J. Virol., 85, 2011
4ZH1	Complement factor H in complex with the GM1 glycan 分子名称: Complement C3, Complement factor H, GLYCEROL, ... 著者 Blaum, B.S, Stehle, T. 登録日 2015-04-24 公開日 2016-01-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.24 Å) 主引用文献 Complement Factor H and Simian Virus 40 bind the GM1 ganglioside in distinct conformations. Glycobiology, 26, 2016
5KEP	High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes 分子名称: Major capsid protein L1 著者 Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S. 登録日 2016-06-10 公開日 2017-01-25 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site. Structure, 25, 2017
5KEQ	High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes 分子名称: Major capsid protein L1 著者 Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S. 登録日 2016-06-10 公開日 2017-01-25 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site. Structure, 25, 2017
1VPN	UNASSEMBLED POLYOMAVIRUS VP1 PENTAMER 分子名称: POLYOMAVIRUS VP1 PENTAMER 著者 Stehle, T, Harrison, S.C. 登録日 1997-03-07 公開日 1997-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 High-resolution structure of a polyomavirus VP1-oligosaccharide complex: implications for assembly and receptor binding. Embo J., 16, 1997
1VPS	POLYOMAVIRUS VP1 PENTAMER COMPLEXED WITH A DISIALYLATED HEXASACCHARIDE 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, POLYOMAVIRUS VP1 PENTAMER 著者 Stehle, T, Harrison, S.C. 登録日 1997-03-07 公開日 1997-05-15 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 High-resolution structure of a polyomavirus VP1-oligosaccharide complex: implications for assembly and receptor binding. Embo J., 16, 1997
1SIE	MURINE POLYOMAVIRUS COMPLEXED WITH A DISIALYLATED OLIGOSACCHARIDE 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, POLYOMAVIRUS COAT PROTEIN VP1 著者 Stehle, T, Harrison, S.C. 登録日 1995-12-12 公開日 1996-06-20 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Crystal structures of murine polyomavirus in complex with straight-chain and branched-chain sialyloligosaccharide receptor fragments. Structure, 4, 1996
1SID	MURINE POLYOMAVIRUS COMPLEXED WITH 3'SIALYL LACTOSE 分子名称: N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, POLYOMAVIRUS COAT PROTEIN VP1 著者 Stehle, T, Harrison, S.C. 登録日 1995-12-12 公開日 1996-06-20 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Crystal structures of murine polyomavirus in complex with straight-chain and branched-chain sialyloligosaccharide receptor fragments. Structure, 4, 1996
3IYS	Homology model of avian polyomavirus asymmetric unit 分子名称: Major capsid protein VP1 著者 Shen, P.S, Enderlein, D, Nelson, C.D.S, Carter, W.S, Kawano, M, Xing, L, Swenson, R.D, Olson, N.H, Baker, T.S, Cheng, R.H, Atwood, W.J, Johne, R, Belnap, D.M. 登録日 2010-04-19 公開日 2011-01-26 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (11.3 Å) 主引用文献 The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4. Virology, 411, 2011
4FB3	Polyomavirus T-ag binds symmetrical repeats at the viral origin in an asymmetrical manner 分子名称: Large T antigen, ORI DNA oligonucleotide-Crick strand, ORI DNA oligonucleotide-Watson strand 著者 Bohm, A, Harrison, C.J, Schaffhausen, B.S, Jiang, T. 登録日 2012-05-22 公開日 2013-10-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.79 Å) 主引用文献 Polyomavirus large T antigen binds symmetrical repeats at the viral origin in an asymmetrical manner. J.Virol., 87, 2013
2IF9	Crystal Structure of SV40 T-antigen origin binding domain disulfide-linked dimer 分子名称: Large T antigen 著者 Meinke, G, Bullock, P.A, Bohm, A. 登録日 2006-09-20 公開日 2007-02-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.586 Å) 主引用文献 The Crystal Structure of the SV40 T-Antigen Origin Binding Domain in Complex with DNA Plos Biol., 5, 2007
1SVL	Co-crystal structure of SV40 large T antigen helicase domain and ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ZINC ION, ... 著者 Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S. 登録日 2004-03-29 公開日 2004-10-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen. Cell(Cambridge,Mass.), 119, 2004
1SVM	Co-crystal structure of SV40 large T antigen helicase domain and ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ZINC ION, ... 著者 Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S. 登録日 2004-03-29 公開日 2004-10-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.94 Å) 主引用文献 Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen. Cell(Cambridge,Mass.), 119, 2004

 

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