PDB: 737 件ウェブページステータス検索Chemie searchBIRD

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7FIX	Cryo-EM structure of cyanobacterial photosystem I in the presence of ferredoxin and cytochrome c6 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, CALCIUM ION, ... 著者 Li, J, Kurisu, G. 登録日 2021-08-01 公開日 2022-09-21 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (1.97 Å) 主引用文献 Structure of cyanobacterial photosystem I complexed with ferredoxin at 1.97 angstrom resolution. Commun Biol, 5, 2022
4FBY	fs X-ray diffraction of Photosystem II 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Alonso-Mori, R, Hellmich, J, Tran, R, Hattne, J, Laksmono, H, Gloeckner, C, Echols, N, Sierra, R.G, Sellberg, J, Lassalle-Kaiser, B, Gildea, R.J, Glatzel, P, Grosse-Kunstleve, R.W, Latimer, M.J, Mcqueen, T.A, Difiore, D, Fry, A.R, Messerschmidt, M.M, Miahnahri, A, Schafer, D.W, Seibert, M.M, Sokaras, D, Weng, T.-C, Zwart, P.H, White, W.E, Adams, P.D, Bogan, M.J, Boutet, S, Williams, G.J, Messinger, J, Sauter, N.K, Zouni, A, Bergmann, U, Yano, J, Yachandra, V.K. 登録日 2012-05-23 公開日 2012-06-20 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (6.56 Å) 主引用文献 Room temperature femtosecond X-ray diffraction of photosystem II microcrystals. Proc.Natl.Acad.Sci.USA, 109, 2012
7LV0	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A. 登録日 2021-02-23 公開日 2021-07-28 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation. Nat Commun, 12, 2021
7K55	Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A. 登録日 2020-09-16 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation. Nat Commun, 12, 2021
7K53	Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A. 登録日 2020-09-16 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation. Nat Commun, 12, 2021
7K54	Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A. 登録日 2020-09-16 公開日 2021-07-28 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation. Nat Commun, 12, 2021
4IXQ	RT fs X-ray diffraction of Photosystem II, dark state 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J. 登録日 2013-01-27 公開日 2013-02-20 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (5.7 Å) 主引用文献 Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature. Science, 340, 2013
4IXR	RT fs X-ray diffraction of Photosystem II, first illuminated state 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Kern, J, Alonso-Mori, R, Tran, R, Hattne, J, Gildea, R.J, Echols, N, Gloeckner, C, Hellmich, J, Laksmono, H, Sierra, R.G, Lassalle-Kaiser, B, Koroidov, S, Lampe, A, Han, G, Gul, S, DiFiore, D, Milathianaki, D, Fry, A.R, Miahnahri, A, Schafer, D.W, Messerschmidt, M, Seibert, M.M, Koglin, J.E, Sokaras, D, Weng, T.-C, Sellberg, J, Latimer, M.J, Grosse-Kunstleve, R.W, Zwart, P.H, White, W.E, Glatzel, P, Adams, P.D, Bogan, M.J, Williams, G.J, Boutet, S, Messinger, J, Zouni, A, Sauter, N.K, Yachandra, V.K, Bergmann, U, Yano, J. 登録日 2013-01-27 公開日 2013-02-20 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (5.9 Å) 主引用文献 Simultaneous femtosecond X-ray spectroscopy and diffraction of photosystem II at room temperature. Science, 340, 2013
5ZF0	X-ray Structure of the Electron Transfer Complex between Ferredoxin and Photosystem I 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Kubota-Kawai, H, Mutoh, R, Shinmura, K, Setif, P, Nowaczyk, M, Roegner, M, Ikegami, T, Tanaka, T, Kurisu, G. 登録日 2018-03-01 公開日 2018-04-11 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 X-ray structure of an asymmetrical trimeric ferredoxin-photosystem I complex Nat Plants, 4, 2018
5V2C	RE-REFINEMENT OF CRYSTAL STRUCTURE OF PHOTOSYSTEM II COMPLEX 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Wang, J, Wiwczar, J.M, Brudvig, G.W. 登録日 2017-03-03 公開日 2017-08-30 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Chlorophyll a with a farnesyl tail in thermophilic cyanobacteria. Photosyn. Res., 134, 2017
5QTQ	PanDDA analysis group deposition -- Crystal Structure of NUDT5 in complex with FS-1169 分子名称: 1,2-ETHANEDIOL, 5-fluoroquinazolin-4(3H)-one, ADP-sugar pyrophosphatase, ... 著者 Dubianok, Y, Krojer, T, Kovacs, H, Moriaud, F, Wright, N, Strain-Damerell, C, Burgess-Brown, N, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F. 登録日 2019-08-14 公開日 2019-12-25 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5QTM	PanDDA analysis group deposition -- Crystal Structure of NUDT5 in complex with FS-2639 分子名称: 1,2-ETHANEDIOL, 7-fluoroquinazolin-4(3H)-one, ADP-sugar pyrophosphatase, ... 著者 Dubianok, Y, Krojer, T, Kovacs, H, Moriaud, F, Wright, N, Strain-Damerell, C, Burgess-Brown, N, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F. 登録日 2019-08-14 公開日 2019-12-25 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.79 Å) 主引用文献 PanDDA analysis group deposition To Be Published
2CZQ	A novel cutinase-like protein from Cryptococcus sp. 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, cutinase-like protein 著者 Masaki, K, Kamini, N.R, Ikeda, H, Iefuji, H, Kondo, H, Suzuki, M, Tsuda, S. 登録日 2005-07-14 公開日 2006-07-14 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Crystal structure and enhanced activity of a cutinase-like enzyme from Cryptococcus sp. strain S-2 Proteins, 77, 2009
3WAW	Crystal Structure of Autotaxin in Complex with 2BoA 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2013-05-09 公開日 2013-07-31 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.954 Å) 主引用文献 Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe Acs Chem.Biol., 8, 2013
3WAX	Crystal Structure of Autotaxin in Complex with 3BoA 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2013-05-09 公開日 2013-07-31 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.899 Å) 主引用文献 Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe Acs Chem.Biol., 8, 2013
3WAY	Crystal Structure of Autotaxin in Complex with 4BoA 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Nishimasu, H, Ishitani, R, Nureki, O. 登録日 2013-05-09 公開日 2013-07-31 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.746 Å) 主引用文献 Screening and X-ray Crystal Structure-based Optimization of Autotaxin (ENPP2) Inhibitors, Using a Newly Developed Fluorescence Probe Acs Chem.Biol., 8, 2013
1WQ8	Crystal structure of Vammin, a VEGF-F from a snake venom 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Vascular endothelial growth factor toxin 著者 Suto, K, Yamazaki, Y, Morita, T, Mizuno, H. 登録日 2004-09-23 公開日 2004-12-07 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structures of novel vascular endothelial growth factors (VEGF) from snake venoms: insight into selective VEGF binding to kinase insert domain-containing receptor but not to fms-like tyrosine kinase-1. J.Biol.Chem., 280, 2005
6NWA	The structure of the photosystem I IsiA super-complex 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Toporik, H, Li, J, Williams, D, Chiu, P.L, Mazor, Y. 登録日 2019-02-06 公開日 2019-05-29 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.48 Å) 主引用文献 The structure of the stress-induced photosystem I-IsiA antenna supercomplex. Nat.Struct.Mol.Biol., 26, 2019
7O1V	Structure of a Minimal Photosystem I 分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... 著者 Nelson, N, Caspy, I, Lambrev, P. 登録日 2021-03-30 公開日 2021-09-01 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (4.31 Å) 主引用文献 Two-Dimensional Electronic Spectroscopy of a Minimal Photosystem I Complex Reveals the Rate of Primary Charge Separation. J.Am.Chem.Soc., 143, 2021
6SR3	X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 62 fs time delay 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ... 著者 Kloos, M, Gorel, A, Nass, K. 登録日 2019-09-04 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses. Nat Commun, 11, 2020
6SR4	X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 112 fs time delay 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ... 著者 Kloos, M, Gorel, A, Nass, K. 登録日 2019-09-04 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses. Nat Commun, 11, 2020
6SR2	X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 37 fs time delay 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ... 著者 Kloos, M, Gorel, A, Nass, K. 登録日 2019-09-04 公開日 2020-04-22 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses. Nat Commun, 11, 2020
6SR5	X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 102 fs time delay 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ... 著者 Kloos, M, Gorel, A, Nass, K. 登録日 2019-09-04 公開日 2020-04-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses. Nat Commun, 11, 2020
6SR1	X-ray pump X-ray probe on lysozyme.Gd nanocrystals: 35 fs time delay 分子名称: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ... 著者 Kloos, M, Gorel, A, Nass, K. 登録日 2019-09-04 公開日 2020-04-22 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses. Nat Commun, 11, 2020
5QTR	PanDDA analysis group deposition -- Crystal Structure of NUDT5 in complex with FS-3764 分子名称: 1,2-ETHANEDIOL, 6-fluoroquinazolin-4(3H)-one, MAGNESIUM ION, ... 著者 Dubianok, Y, Krojer, T, Kovacs, H, Moriaud, F, Wright, N, Strain-Damerell, C, Burgess-Brown, N, Bountra, C, Arrowsmith, C.H, Edwards, A, von Delft, F. 登録日 2019-10-31 公開日 2019-12-25 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 PanDDA analysis group deposition To Be Published

 

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