PDB: 201 件ウェブページステータス検索Chemie searchBIRD

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7T8I	Crystal structure of the ImmR transcriptional regulator DNA-binding domain of Bacillus subtilis 分子名称: Phage element (ICEBs1)transcriptional regulator (Xre family) 著者 Caliandro, R, de Diego, I, Gomis-Ruth, F.X. 登録日 2021-12-16 公開日 2022-03-16 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structure report of the ImmR transcriptional regulator DNA-binding domain of the Bacillus subtilis ICEBs1 transposon. Sci Rep, 12, 2022
8QAO	Crystal structure of TP901-1 CI-NTD89 repressor N-terminal domain 分子名称: CI 著者 Huang, Z, Hamad, G.M, Lo Leggio, L, Varming, A.K. 登録日 2023-08-23 公開日 2024-02-28 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.29 Å) 主引用文献 CI:Mor interactions in the lysogeny switches of Lactococcus lactis TP901-1 and Staphylococcus aureus phi 13 bacteriophages. Microbiome Res Rep, 3, 2024
3LFP	Crystal Structure of the Restriction-Modification Controller Protein C.Csp231I 分子名称: Csp231I C protein 著者 McGeehan, J.E, Streeter, S.D, Thresh, S.J, Kneale, G.G. 登録日 2010-01-18 公開日 2011-02-02 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Analysis of a Novel Class of R-M Controller Proteins: C.Csp231I from Citrobacter sp. RFL231. J.Mol.Biol., 409, 2011
3KZ3	A structure of a lambda repressor fragment mutant 分子名称: Repressor protein CI 著者 Gruebele, M, Liu, F, Gao, Y. 登録日 2009-12-07 公開日 2010-02-23 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 A survey of lambda repressor fragments from two-state to downhill folding. J.Mol.Biol., 397, 2010
3KXA	Crystal Structure of NGO0477 from Neisseria gonorrhoeae 分子名称: ASPARAGINE, CHLORIDE ION, Putative uncharacterized protein, ... 著者 Ren, J, Sainsbury, S, Nettleship, J.E, Owens, R.J, Oxford Protein Production Facility (OPPF) 登録日 2009-12-02 公開日 2010-01-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Proteins, 78, 2010
2R1J	Crystal Structure of the P22 c2 Repressor protein in complex with the synthetic operator 9T 分子名称: 5'-D(*DCP*DAP*DTP*DTP*DTP*DAP*DAP*DGP*DAP*DTP*DAP*DTP*DCP*DTP*DTP*DAP*DAP*DAP*DTP*DA)-3', 5'-D(*DTP*DAP*DTP*DTP*DTP*DAP*DAP*DGP*DAP*DTP*DAP*DTP*DCP*DTP*DTP*DAP*DAP*DAP*DTP*DG)-3', Repressor protein C2 著者 Williams, L.D, Koudelka, G.B, Watkins, D, Hsiao, C, Woods, K. 登録日 2007-08-22 公開日 2008-04-29 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 P22 c2 repressor-operator complex: mechanisms of direct and indirect readout Biochemistry, 47, 2008
1ADR	DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE STRUCTURE OF THE DNA-BINDING DOMAIN OF THE P22 C2 REPRESSOR (1-76) IN SOLUTION AND COMPARISON WITH THE DNA-BINDING DOMAIN OF THE 434 REPRESSOR 分子名称: P22 C2 REPRESSOR 著者 Sevillasierra, P, Otting, G, Wuthrich, K. 登録日 1993-07-19 公開日 1994-01-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Determination of the nuclear magnetic resonance structure of the DNA-binding domain of the P22 c2 repressor (1 to 76) in solution and comparison with the DNA-binding domain of the 434 repressor. J.Mol.Biol., 235, 1994
3LIS	Crystal Structure of the Restriction-Modification Controller Protein C.Csp231I (Monoclinic form) 分子名称: Csp231I C protein 著者 McGeehan, J.E, Streeter, S.D, Thresh, S.J, Kneale, G.G. 登録日 2010-01-25 公開日 2011-02-02 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural Analysis of a Novel Class of R-M Controller Proteins: C.Csp231I from Citrobacter sp. RFL231. J.Mol.Biol., 409, 2011
8DTQ	Crystal Structure of Staphylococcus aureus pSK41 Cop 分子名称: CHLORIDE ION, Helix-turn-helix domain, SODIUM ION 著者 Walton, W.G, Eakes, T.C, Redinbo, M.R, McLaughlin, K.J. 登録日 2022-07-26 公開日 2023-08-02 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 pSK41/pGO1-family conjugative plasmids of Staphylococcus aureus encode a cryptic repressor of replication. Plasmid, 128, 2023
8BNY	Structure of the tetramerization domain of pLS20 conjugation repressor Rco 分子名称: CHLORIDE ION, Immunity repressor protein 著者 Bernardo, N, Crespo, I, Meijer, W.J.J, Boer, D.R. 登録日 2022-11-14 公開日 2023-04-19 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.429 Å) 主引用文献 A tetramerization domain in prokaryotic and eukaryotic transcription regulators homologous to p53. Acta Crystallogr D Struct Biol, 79, 2023
1PER	THE COMPLEX BETWEEN PHAGE 434 REPRESSION DNA-BINDING DOMAIN AND OPERATOR SITE OR3: STRUCTURAL DIFFERENCES BETWEEN CONSENSUS AND NON-CONSENSUS HALF-SITES 分子名称: DNA (5'-D(*AP*AP*GP*TP*AP*CP*AP*GP*TP*TP*TP*TP*TP*CP*TP*TP*G P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*CP*AP*AP*GP*AP*AP*AP*AP*AP*CP*TP*GP*T P*AP*CP*T)-3'), PROTEIN (434 REPRESSOR) 著者 Rodgers, D.W, Harrison, S.C. 登録日 1993-11-09 公開日 1994-01-31 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The complex between phage 434 repressor DNA-binding domain and operator site OR3: structural differences between consensus and non-consensus half-sites. Structure, 1, 1993
8EZT	Crystal structure of HipB(Lp) from Legionella pneumophila 分子名称: CHLORIDE ION, HipB(Lp) 著者 Stogios, P.J, Skarina, T, Di Leo, R, Lin, J, Ensminger, A, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2022-11-01 公開日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Crystal structure of HipB(Lp) from Legionella pneumophila To Be Published
5WOQ	Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis 分子名称: Transcriptional regulator ClgR 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2017-08-02 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal structure of an XRE family protein transcriptional regulator from Mycobacterium smegmatis To Be Published
7ZVI	Non-canonical Staphylococcus aureus pathogenicity island repression 分子名称: Orf22, Sri 著者 Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Marina, A, Penades, J.R. 登録日 2022-05-16 公開日 2022-09-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.973 Å) 主引用文献 Non-canonical Staphylococcus aureus pathogenicity island repression. Nucleic Acids Res., 50, 2022
3ZHM	N-terminal domain of the CI repressor from bacteriophage TP901-1 in complex with the OL2 operator half-site 分子名称: 5'-D(*AP*CP*GP*TP*GP*AP*AP*CP*TP*TP*GP*CP*AP*CP *TP*TP*GP*A)-3', 5'-D(*AP*GP*TP*TP*CP*AP*CP*GP*TP*TP*CP*AP*AP*GP *TP*GP*CP*A)-3', CI 著者 Frandsen, K.H, Rasmussen, K.K, Poulsen, J.N, Lo Leggio, L. 登録日 2012-12-22 公開日 2013-12-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Binding of the N-Terminal Domain of the Lactococcal Bacteriophage Tp901-1 Ci Repressor to its Target DNA: A Crystallography, Small Angle Scattering, and Nuclear Magnetic Resonance Study. Biochemistry, 52, 2013
1PRA	DETERMINATION OF THE NUCLEAR MAGNETIC RESONANCE SOLUTION STRUCTURE OF THE DNA-BINDING DOMAIN (RESIDUES 1 TO 69) OF THE 434 REPRESSOR AND COMPARISON WITH THE X-RAY CRYSTAL STRUCTURE 分子名称: 434 REPRESSOR 著者 Neri, D, Billeter, M, Wuthrich, K. 登録日 1991-11-18 公開日 1993-10-31 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Determination of the nuclear magnetic resonance solution structure of the DNA-binding domain (residues 1 to 69) of the 434 repressor and comparison with the X-ray crystal structure. J.Mol.Biol., 223, 1992
3ZHI	N-terminal domain of the CI repressor from bacteriophage TP901-1 分子名称: CI 著者 Frandsen, K.H, Rasmussen, K.K, Poulsen, J.N, Lo Leggio, L. 登録日 2012-12-21 公開日 2013-12-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Binding of the N-Terminal Domain of the Lactococcal Bacteriophage Tp901-1 Ci Repressor to its Target DNA: A Crystallography, Small Angle Scattering, and Nuclear Magnetic Resonance Study. Biochemistry, 52, 2013
6LB3	Crystal structure of PA4674 in complex with its operator DNA (18bp) from Pseudomonas aeruginosa 分子名称: DNA (5'-D(P*AP*CP*CP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*CP*GP*T)-3'), DNA (5'-D(P*AP*CP*GP*CP*TP*TP*AP*AP*CP*GP*TP*TP*AP*AP*GP*GP*GP*T)-3'), HTH cro/C1-type domain-containing protein, ... 著者 Liu, Y, Zhang, H, Gao, Z, Dong, Y. 登録日 2019-11-13 公開日 2020-11-18 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.497 Å) 主引用文献 Crystal structure of PA4674 in complex with its operator DNA (18bp) from Pseudomonas aeruginosa To Be Published
5TN0	Solution Structure of the N-terminal DNA-binding domain of the master biofilm-regulator SinR from Bacillus subtilis 分子名称: HTH-type transcriptional regulator SinR 著者 Draughn, G.L, Bobay, B.G, Stowe, S.D, Thompson, R.J, Cavanagh, J. 登録日 2016-10-13 公開日 2017-10-25 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The Solution Structures and Interaction of SinR and SinI: Elucidating the Mechanism of Action of the Master Regulator Switch for Biofilm Formation in Bacillus subtilis. J.Mol.Biol., 2019
6LTY	DNA bound antitoxin HigA3 分子名称: DNA (5'-D(P*CP*CP*AP*CP*GP*AP*GP*AP*TP*AP*TP*AP*AP*CP*CP*TP*AP*GP*AP*G)-3'), DNA (5'-D(P*CP*TP*CP*TP*AP*GP*GP*TP*TP*AP*TP*AP*TP*CP*TP*CP*GP*TP*GP*G)-3'), Putative antitoxin HigA3 著者 Park, J.Y, Lee, B.J. 登録日 2020-01-23 公開日 2020-07-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 Induced DNA bending by unique dimerization of HigA antitoxin. Iucrj, 7, 2020
6LTZ	Induced DNA bending by unique dimerization of HigA antitoxin 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Park, J.Y, Lee, B.J. 登録日 2020-01-23 公開日 2020-07-15 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.973 Å) 主引用文献 Induced DNA bending by unique dimerization of HigA antitoxin. Iucrj, 7, 2020
7P4A	Non-canonical Staphylococcus aureus pathogenicity island repression. 分子名称: Sri, Stl 著者 Miguel-Romero, L, Alqasmi, M, Bacarizo, J, Tan, J.A, Cogdell, R.J, Chen, J, Byron, O, Christie, G.E, Marina, A, Penades, J.R. 登録日 2021-07-10 公開日 2022-07-27 最終更新日 2022-11-16 実験手法 X-RAY DIFFRACTION (2.901 Å) 主引用文献 Non-canonical Staphylococcus aureus pathogenicity island repression. Nucleic Acids Res., 50, 2022
4X4E	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 14.4 MGy 分子名称: 35-MER DNA, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015
4X4I	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 44.6 MGy 分子名称: 35-MER DNA, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015
4X4G	RADIATION DAMAGE TO THE NUCLEOPROTEIN COMPLEX C.Esp1396I: DOSE (DWD) 26.8 MGy 分子名称: 35-MER DNA, Regulatory protein 著者 Bury, C.S, McGeehan, J.E, Garman, E.F. 登録日 2014-12-02 公開日 2015-03-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Radiation damage to nucleoprotein complexes in macromolecular crystallography. J.Synchrotron Radiat., 22, 2015

 

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