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8W01
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Crystal structure of DUF1735 domain-containing protein (GH18-like) from Bacteroides faecium at 2.7 A resolution (Space group C2)
分子名称: DUF1735 domain-containing protein
著者Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
登録日2024-02-13
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8W04
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Crystal structure of DUF1735-domain containing protein (GH18-like) from Bacteroides faecium at 2.9 A resolution (Space group P21)
分子名称: DUF1735 domain-containing protein
著者Sastre, D.E, Navarro, M.V.A.S, Sultana, N, Sundberg, E.J.
登録日2024-02-13
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8XBD
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GH18 family chitinase from cold seep metagenome
分子名称: GH18 chitinase-like superfamily protein
著者Yang, J.
登録日2023-12-06
公開日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献GH18 family chitinase from cold seep metagenome
To Be Published
8R4X
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Structure of Chitinase-3-like protein 1 in complex with inhibitor 30
分子名称: (2~{S},5~{S})-4-[1-(4-chloranylpyridin-2-yl)piperidin-4-yl]-5-[(4-chlorophenyl)methyl]-2-methyl-morpholine, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-14
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8R41
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Structure of CHI3L1 in complex with inhibitor 1
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-10
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8R42
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Structure of CHI3L1 in complex with inhibititor 2
分子名称: 1,2-ETHANEDIOL, 2-[4-[(2~{R})-2-[(4-chlorophenyl)methyl]pyrrolidin-1-yl]piperidin-1-yl]pyridine, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nowak, E, Napiorkowska-Gromadzka, A, Nowotny, M.
登録日2023-11-10
公開日2024-03-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Structure-Based Discovery of High-Affinity Small Molecule Ligands and Development of Tool Probes to Study the Role of Chitinase-3-Like Protein 1.
J.Med.Chem., 67, 2024
8U9F
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Crystal structure of Bacteroides thetaiotamicron BT1285 in complex with NaI
分子名称: 1,2-ETHANEDIOL, Endo-beta-N-acetylglucosaminidase, IODIDE ION, ...
著者Sastre, D.E, Navarro, M.V.A.S, Sundberg, E.J.
登録日2023-09-19
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U48
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Crystal structure of Bacteroides thetaiotamicron BT1285 D161A-E163A inactive Endoglycosidase in complex with high-mannose N-glycan (Man9GlcNAc2) substrate
分子名称: Endo-beta-N-acetylglucosaminidase, PHOSPHATE ION, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Sastre, D.E, Sultana, N, Navarro, M.V.A.S, Sundberg, E.J.
登録日2023-09-09
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U47
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Crystal structure of Bacteroides thetaiotaomicron VPI-5482 Endoglycosidase BT1285
分子名称: Endo-beta-N-acetylglucosaminidase, MAGNESIUM ION, PHOSPHATE ION
著者Sastre, D.E, Sultana, N, Sundberg, E.J.
登録日2023-09-09
公開日2024-05-29
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8U46
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Crystal structure of Bacteroides thetaiotaomicron VPI-5482 Endoglycosidase BT1285 D161A-E163A inactive version
分子名称: Endo-beta-N-acetylglucosaminidase
著者Sastre, D.E, Sultana, N, Sundberg, E.J.
登録日2023-09-09
公開日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Human gut microbes express functionally distinct endoglycosidases to metabolize the same N-glycan substrate
Nat Commun, 2024
8P8Q
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Recombinant Ym1 crystal structure
分子名称: ACETATE ION, Chitinase-like protein 3, GLYCEROL
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Aegerter, H, Smole, U, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024
8P8T
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Ex vivo Ym2 crystal structure
分子名称: Chitinase-like protein 4, GLYCEROL
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Smole, U, Aegerter, H, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024
8P8S
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Recombinant Ym2 crystal structure
分子名称: 1,2-ETHANEDIOL, Chitinase-like protein 4
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Smole, U, Aegerter, A, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024
8P8R
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BU of 8p8r by Molmil
Ex vivo Ym1 crystal structure
分子名称: 1,2-ETHANEDIOL, Chitinase-like protein 3
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Smole, U, Aegerter, H, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024
8OYE
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Clostridium perfringens chitinase CP4_3455 E196Q with chitin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chitodextrinase, DIMETHYL SULFOXIDE
著者Bloch, Y, Savvides, S.N.
登録日2023-05-04
公開日2023-07-12
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Clostridium perfringens chitinase CP4_3455 E196Q with chitin
To Be Published
8OWF
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Clostridium perfringens chitinase CP4_3455 with chitosan
分子名称: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Chitodextrinase, ...
著者Bloch, Y, Savvides, S.N.
登録日2023-04-27
公開日2023-07-12
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Clostridium perfringens chitinase CP4_3455 with chitosan
To Be Published
8OVR
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Clostridium perfringens chitinase CP56_3454 apo form
分子名称: Chitinase B, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), SODIUM ION, ...
著者Bloch, Y, Savvides, S.N.
登録日2023-04-26
公開日2023-07-12
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Clostridium perfringens chitinase CP56_3454 apo form
To Be Published
8OTB
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Clostridium perfringens chitinase CP4_3455
分子名称: CHLORIDE ION, Chitodextrinase, DI(HYDROXYETHYL)ETHER, ...
著者Bloch, Y, Savvides, S.N.
登録日2023-04-20
公開日2023-07-12
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Clostridium perfringens chitinase CP4_3455
To Be Published
8OSE
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C. perfringens chitinase CP4_3455 in complex with inhibitor bisdionin C
分子名称: 1,1'-PROPANE-1,3-DIYLBIS(3,7-DIMETHYL-3,7-DIHYDRO-1H-PURINE-2,6-DIONE), 1,2-ETHANEDIOL, Chitodextrinase, ...
著者Bloch, Y, Savvides, S.N.
登録日2023-04-18
公開日2023-07-12
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献C. perfringens chitinase CP4_3455 in complex with inhibitor bisdionin C
To Be Published
8GCA
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Mouse acidic mammalian chitinase, catalytic domain in complex with N,N',N''-triacetylchitotriose at pH 4.74
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase, ...
著者Diaz, R.E, Fraser, J.S.
登録日2023-03-01
公開日2023-03-15
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
8C6Z
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necrotic enteritis associated Clostridium p. chitinase F8UNI4 in complex with inhibitor bisdionin C
分子名称: 1,1'-PROPANE-1,3-DIYLBIS(3,7-DIMETHYL-3,7-DIHYDRO-1H-PURINE-2,6-DIONE), CADMIUM ION, COBALT (II) ION, ...
著者Bloch, Y, Savvides, S.N.
登録日2023-01-12
公開日2023-05-31
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Contribution and structural characterization of Chitinases to Clostridium perfringens Pathogenesis in Broilers
To Be Published
8FRC
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Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 4.91
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-08
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
8FRA
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Mouse acidic mammalian chitinase, catalytic domain in complex with diacetylchitobiose at pH 5.60
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase, ...
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-08
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
8FRB
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Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 5.25
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetylamino-2-deoxy-alpha-L-idopyranose, ...
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-08
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024
8FRD
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Mouse acidic mammalian chitinase, catalytic domain in complex with N,N'-diacetylchitobiose at pH 5.25
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Acidic mammalian chitinase, MAGNESIUM ION
著者Diaz, R.E, Fraser, J.S.
登録日2023-01-06
公開日2023-03-15
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Structural characterization of ligand binding and pH-specific enzymatic activity of mouse Acidic Mammalian Chitinase.
Biorxiv, 2024

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件を2024-06-12に公開中

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