PDB: 98041 件ウェブページステータス検索Chemie searchBIRD

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3AHH	H142A mutant of Phosphoketolase from Bifidobacterium Breve complexed with acetyl thiamine diphosphate 分子名称: 1,2-ETHANEDIOL, 2-ACETYL-THIAMINE DIPHOSPHATE, MAGNESIUM ION, ... 著者 Suzuki, R, Katayama, T, Kim, B.-J, Wakagi, T, Shoun, H, Ashida, H, Yamamoto, K, Fushinobu, S. 登録日 2010-04-22 公開日 2010-08-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal Structures of phosphoketolase: thiamine diphosphate-dependent dehydration mechanism J.Biol.Chem., 285, 2010
1R2A	THE MOLECULAR BASIS FOR PROTEIN KINASE A ANCHORING REVEALED BY SOLUTION NMR 分子名称: PROTEIN (CAMP-DEPENDENT PROTEIN KINASE TYPE II REGULATORY SUBUNIT) 著者 Newlon, M.G, Roy, M, Morikis, D, Hausken, Z.E, Coghlan, V, Scott, J.D, Jennings, P.A. 登録日 1998-12-07 公開日 1998-12-16 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 The molecular basis for protein kinase A anchoring revealed by solution NMR. Nat.Struct.Biol., 6, 1999
1RFL	NMR data driven structural model of G-domain of MnmE protein 分子名称: Probable tRNA modification GTPase trmE 著者 Monleon, D, Esteve, V, Martinez-Vicente, M, Yim, L, Armengod, M.E, Celda, B. 登録日 2003-11-10 公開日 2003-12-02 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural insights into the GTPase domain of Escherichia coli MnmE protein. Proteins, 66, 2007
2XDH	Non-cellulosomal cohesin from the hyperthermophilic archaeon Archaeoglobus fulgidus 分子名称: CHLORIDE ION, COHESIN, MAGNESIUM ION, ... 著者 Voronov-Goldman, M, Lamed, R, Noach, I, Borovok, I, Kwiat, M, Rosenheck, S, Shimon, L.J.W, Bayer, E.A, Frolow, F. 登録日 2010-05-02 公開日 2010-05-26 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 Non-Cellulosomal Cohesin from the Hyperthermophilic Archaeon Archaeoglobus Fulgidus Proteins, 79, 2011
2Z41	Crystal Structure Analysis of the Ski2-type RNA helicase 分子名称: MAGNESIUM ION, putative ski2-type helicase 著者 Nakashima, T, Zhang, X, Kakuta, Y, Yao, M, Tanaka, I, Kimura, M. 登録日 2007-06-12 公開日 2008-04-08 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3.51 Å) 主引用文献 Crystal structure of an archaeal Ski2p-like protein from Pyrococcus horikoshii OT3 Protein Sci., 17, 2008
1M5X	Crystal structure of the homing endonuclease I-MsoI bound to its DNA substrate 分子名称: 5'-D(*CP*GP*GP*AP*AP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*TP*CP*TP*GP*C)-3', 5'-D(*GP*CP*AP*GP*AP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*TP*TP*CP*CP*G)-3', CALCIUM ION, ... 著者 Chevalier, B, Turmel, M, Lemieux, C, Monnat, R.J, Stoddard, B.L. 登録日 2002-07-10 公開日 2003-06-03 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Flexible DNA Target Site Recognition by Divergent Homing Endonuclease Isoschizomers I-CreI and I-MsoI J.Mol.Biol., 329, 2003
1R1S	Structural Basis for Differential Recognition of Tyrosine Phosphorylated Sites in the Linker for Activation of T cells (LAT) by the Adaptor Protein Gads 分子名称: GRB2-related adaptor protein 2, LAT pY226 peptide, SULFATE ION 著者 Cho, S, Mariuzza, R.A. 登録日 2003-09-24 公開日 2004-09-28 最終更新日 2018-04-04 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for differential recognition of tyrosine-phosphorylated sites in the linker for activation of T cells (LAT) by the adaptor Gads. Embo J., 23, 2004
1W5O	Stepwise introduction of zinc binding site into porphobilinogen synthase of Pseudomonas aeruginosa (mutations A129C, D131C and D139C) 分子名称: DELTA-AMINOLEVULINIC ACID DEHYDRATASE, GLYCEROL, MAGNESIUM ION, ... 著者 Frere, F, Reents, H, Schubert, W.-D, Heinz, D.W, Jahn, D. 登録日 2004-08-09 公開日 2005-01-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Tracking the Evolution of Porphobilinogen Synthase Metal Dependence in Vitro J.Mol.Biol., 345, 2005
1RDP	Cholera Toxin B-Pentamer Complexed With Bivalent Nitrophenol-Galactoside Ligand BV3 分子名称: 1,3-BIS-([[3-(4-{3-[3-NITRO-5-(GALACTOPYRANOSYLOXY)-BENZOYLAMINO]-PROPYL}-PIPERAZIN-1-YL)-PROPYLAMINO-3,4-DIOXO-CYCLOBU TENYL]-AMINO-ETHYL]-AMINO-CARBONYLOXY)-2-AMINO-PROPANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, TRIETHYLENE GLYCOL, ... 著者 Pickens, J.C, Mitchell, D.D, Liu, J, Tan, X, Zhang, Z, Verlinde, C.L, Hol, W.G, Fan, E. 登録日 2003-11-05 公開日 2004-10-26 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Nonspanning bivalent ligands as improved surface receptor binding inhibitors of the cholera toxin B pentamer. Chem.Biol., 11, 2004
2ZO5	Structure of the Thioalkalivibrio nitratireducens cytochrome c nitrite reductase in a complex with azide 分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, ... 著者 Polyakov, K.M, Boyko, K.M, Slutsky, A, Tikhonova, T.V, Antipov, A.N, Zvyagilskaya, R.A, Popov, A.N, Lamzin, V.S, Bourenkov, G.P, Popov, V.O. 登録日 2008-05-05 公開日 2009-05-05 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 High-resolution structural analysis of a novel octaheme cytochrome c nitrite reductase from the haloalkaliphilic bacterium Thioalkalivibrio nitratireducens J.Mol.Biol., 389, 2009
1JFV	X-Ray Structure of oxidised C10S, C15A arsenate reductase from pI258 分子名称: PERCHLORATE ION, POTASSIUM ION, arsenate reductase 著者 Zegers, I, Martins, J.C, Willem, R, Wyns, L, Messens, J. 登録日 2001-06-22 公開日 2001-10-03 最終更新日 2021-10-27 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Arsenate reductase from S. aureus plasmid pI258 is a phosphatase drafted for redox duty. Nat.Struct.Biol., 8, 2001
1VQI	GENE V PROTEIN MUTANT WITH ILE 47 REPLACED BY VAL 47 (I47V) 分子名称: GENE V PROTEIN 著者 Zhang, H, Skinner, M.M, Sandberg, W.S, Wang, A.H.-J, Terwilliger, T.C. 登録日 1996-08-14 公開日 1997-02-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Context dependence of mutational effects in a protein: the crystal structures of the V35I, I47V and V35I/I47V gene V protein core mutants. J.Mol.Biol., 259, 1996
1VQF	GENE V PROTEIN MUTANT WITH VAL 35 REPLACED BY ILE 35 AND ILE 47 REPLACED BY VAL 47 (V35I, I47V) 分子名称: GENE V PROTEIN 著者 Zhang, H, Skinner, M.M, Sandberg, W.S, Wang, A.H.-J, Terwilliger, T.C. 登録日 1996-08-14 公開日 1997-02-12 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Context dependence of mutational effects in a protein: the crystal structures of the V35I, I47V and V35I/I47V gene V protein core mutants. J.Mol.Biol., 259, 1996
2Y0C	BceC mutation Y10S 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ... 著者 Rocha, J, Popescu, A.O, Borges, P, Mil-Homens, D, Sa-Correia, I, Fialho, A.M, Frazao, C. 登録日 2010-12-02 公開日 2011-07-27 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure of Burkholderia Cepacia Udp-Glucose Dehydrogenase (Ugd) Bcec and Role of Tyr10 in Final Hydrolysis of Ugd Thioester Intermediate. J.Bacteriol., 193, 2011
1RB8	The phiX174 DNA binding protein J in two different capsid environments. 分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, Capsid protein, DNA (5'-D(P*CP*AP*AP*A)-3'), ... 著者 Bernal, R.A, Hafenstein, S, Esmeralda, R, Fane, B.A, Rossmann, M.G. 登録日 2003-11-03 公開日 2004-04-13 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 The phiX174 Protein J Mediates DNA Packaging and Viral Attachment to Host Cells. J.Mol.Biol., 337, 2004
2L65	HADDOCK calculated model of the complex of the resistance protein CalC and Calicheamicin-Gamma 分子名称: 2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose-(1-2)-4-amino-4,6-dideoxy-beta-D-glucopyranose, 2,6-dideoxy-4-thio-beta-D-allopyranose, 3-O-methyl-alpha-L-rhamnopyranose, ... 著者 Singh, S, Markley, J.L, Thorson, J.S, Center for Eukaryotic Structural Genomics (CESG) 登録日 2010-11-15 公開日 2011-03-02 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural insight into the self-sacrifice mechanism of enediyne resistance. Acs Chem.Biol., 1, 2006
2V8G	Crystal structure of beta-alanine synthase from Saccharomyces kluyveri in complex with the product beta-alanine 分子名称: BETA-ALANINE, BETA-ALANINE SYNTHASE, BICINE, ... 著者 Lundgren, S, Andersen, B, Piskur, J, Dobritzsch, D. 登録日 2007-08-07 公開日 2007-10-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structures of Yeast -Alanine Synthase Complexes Reveal the Mode of Substrate Binding and Large Scale Domain Closure Movements. J.Biol.Chem., 282, 2007
2FQ1	Crystal structure of the two-domain non-ribosomal peptide synthetase EntB containing isochorismate lyase and aryl-carrier protein domains 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Isochorismatase, ... 著者 Drake, E.J, Nicolai, D.A, Gulick, A.M. 登録日 2006-01-17 公開日 2006-05-02 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the EntB multidomain nonribosomal peptide synthetase and functional analysis of its interaction with the EntE adenylation domain. Chem.Biol., 13, 2006
2UXK	X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 10 in the charge-separated state 分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, CARDIOLIPIN, ... 著者 Koepke, J, Diehm, R, Fritzsch, G. 登録日 2007-03-28 公開日 2007-07-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol., 371, 2007
1RD9	Cholera Toxin B-Pentamer Complexed With Bivalent Nitrophenol-Galactoside Ligand BV2 分子名称: 1,3-BIS-([3-(4-{3-[3-NITRO-5-(GALACTOPYRANOSYLOXY)-BENZOYLAMINO]-PROPYL}-PIPERAZIN-1-YL)-PROPYL-AMINO]-CARBONYLOXY)-2-AMINO-PROPANE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, HEXAETHYLENE GLYCOL, ... 著者 Pickens, J.C, Mitchell, D.D, Liu, J, Tan, X, Zhang, Z, Verlinde, C.L, Hol, W.G, Fan, E. 登録日 2003-11-05 公開日 2004-10-26 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.44 Å) 主引用文献 Nonspanning bivalent ligands as improved surface receptor binding inhibitors of the cholera toxin B pentamer. Chem.Biol., 11, 2004
1RCV	Cholera Toxin B-Pentamer Complexed With Bivalent Nitrophenol-Galactoside Ligand BV1 分子名称: [3-(4-{3-[3-NITRO-5-(GALACTOPYRANOSYLOXY)-BENZOYLAMINO]-PROPYL}-PIPERAZIN-1-YL)-PROPYLAMINO] -2-(3-{4-[3-(3-NITRO-5-[GALACTOPYRANOSYLOXY]-BENZOYLAMINO)-PROPYL]-PIPERAZIN-1-YL} -PROPYL-AMINO)-3,4-DIOXO-CYCLOBUTENE, cholera toxin B protein (CTB) 著者 Pickens, J.C, Mitchell, D.D, Liu, J, Tan, X, Zhang, Z, Verlinde, C.L, Hol, W.G, Fan, E. 登録日 2003-11-04 公開日 2004-10-26 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Nonspanning bivalent ligands as improved surface receptor binding inhibitors of the cholera toxin B pentamer. Chem.Biol., 11, 2004
2UWS	X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state 分子名称: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ... 著者 Koepke, J, Diehm, R, Fritzsch, G. 登録日 2007-03-23 公開日 2007-07-03 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States. J.Mol.Biol., 371, 2007
1JGT	CRYSTAL STRUCTURE OF BETA-LACTAM SYNTHETASE 分子名称: BETA-LACTAM SYNTHETASE, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, GLYCEROL, ... 著者 Miller, M.T, Bachmann, B.O, Townsend, C.A, Rosenzweig, A.C. 登録日 2001-06-26 公開日 2001-12-28 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Structure of beta-lactam synthetase reveals how to synthesize antibiotics instead of asparagine. Nat.Struct.Biol., 8, 2001
1RL2	RIBOSOMAL PROTEIN L2 RNA-BINDING DOMAIN FROM BACILLUS STEAROTHERMOPHILUS 分子名称: PROTEIN (RIBOSOMAL PROTEIN L2) 著者 Nakagawa, A, Hosaka, H, Nakashima, T, Tanaka, I. 登録日 1999-03-25 公開日 1999-04-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The three-dimensional structure of the RNA-binding domain of ribosomal protein L2; a protein at the peptidyl transferase center of the ribosome. EMBO J., 18, 1999
3EK7	Calcium-saturated GCaMP2 dimer 分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ... 著者 Akerboom, J, Velez Rivera, J.D, Looger, L.L, Schreiter, E.R. 登録日 2008-09-18 公開日 2008-12-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design J.Biol.Chem., 284, 2009

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