PDB: 47065 件ウェブページステータス検索Chemie searchBIRD

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5TP6	Solution structure of the CaM34 with the iNOS CaM binding domain peptide 分子名称: Calmodulin, Nitric oxide synthase, inducible 著者 Piazza, M, Dieckmann, T, Guillemette, J.G. 登録日 2016-10-19 公開日 2017-09-27 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural Consequences of Calmodulin EF Hand Mutations. Biochemistry, 56, 2017
4XM5	C. glabrata Slx1. 分子名称: CHLORIDE ION, Structure-specific endonuclease subunit SLX1, ZINC ION 著者 Gaur, V, Wyatt, H.D.M, Komorowska, W, Szczepanowski, R.H, de Sanctis, D, Gorecka, K.M, West, S.C, Nowotny, M. 登録日 2015-01-14 公開日 2015-03-25 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Structural and Mechanistic Analysis of the Slx1-Slx4 Endonuclease. Cell Rep, 10, 2015
5TWP	Pre-catalytic ternary complex of human Polymerase Mu with incoming nonhydrolyzable UMPNPP 分子名称: 1,2-ETHANEDIOL, 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ... 著者 Moon, A.F, Pryor, J.M, Ramsden, D.A, Kunkel, T.A, Bebenek, K, Pedersen, L.C. 登録日 2016-11-14 公開日 2017-07-05 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.001 Å) 主引用文献 Structural accommodation of ribonucleotide incorporation by the DNA repair enzyme polymerase Mu. Nucleic Acids Res., 45, 2017
5TRC	Crystal structure of phosphorylated AC3-AC5 domains of yeast acetyl-CoA carboxylase 分子名称: Acetyl-CoA carboxylase, CHLORIDE ION 著者 Wei, J, Tong, L. 登録日 2016-10-26 公開日 2016-12-07 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A unified molecular mechanism for the regulation of acetyl-CoA carboxylase by phosphorylation. Cell Discov, 2, 2016
4XN0	Tailspike protein mutant E372A of E. coli bacteriophage HK620 分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, SODIUM ION, ... 著者 Gohlke, U, Broeker, N.K, Heinemann, U, Seckler, R, Barbirz, S. 登録日 2015-01-15 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Enthalpic cost of water removal from a hydrophobic glucose binding cavity on HK620 tailspike protein. to be published
2MWR	Solution Structure of Acidocin B, a Circular Bacteriocin from Lactobacillus acidophilus M46 分子名称: Acidocin B 著者 Vederas, J.C, Acedo, J.Z, van Belkum, M.J, Lohans, C.T. 登録日 2014-11-19 公開日 2015-03-04 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Solution Structure of Acidocin B, a Circular Bacteriocin Produced by Lactobacillus acidophilus M46. Appl.Environ.Microbiol., 81, 2015
5TZ0	Structure of the Fremyella diplosiphon Fluorescence Recovery Protein 分子名称: Fluorescence Recovery Protein 著者 Sutter, M, Pawlowski, E.G, Kerfeld, C.A. 登録日 2016-11-21 公開日 2017-07-19 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.025 Å) 主引用文献 Additional families of orange carotenoid proteins in the photoprotective system of cyanobacteria. Nat Plants, 3, 2017
6ABM	Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with pTmdZLys 分子名称: (2S)-2-azanyl-6-[[4-[3-(trifluoromethyl)-1,2-diazirin-3-yl]phenyl]methoxycarbonylamino]hexanoic acid, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Yanagisawa, T, Kuratani, M, Yokoyama, S. 登録日 2018-07-22 公開日 2019-04-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.368 Å) 主引用文献 Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase. Cell Chem Biol, 26, 2019
6A4A	Oligoribonuclease (ORN) from Colwellia psychrerythraea strain 34H 分子名称: MAGNESIUM ION, Oligoribonuclease 著者 Lee, C.W, Park, S, Lee, J.H. 登録日 2018-06-19 公開日 2019-03-13 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural basis of small RNA hydrolysis by oligoribonuclease (CpsORN) from Colwellia psychrerythraea strain 34H. Sci Rep, 9, 2019
6AC4	Rat Xanthine oxidoreductase, D428N variant 分子名称: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, Xanthine dehydrogenase/oxidase 著者 Okamoto, K, Kawaguchi, Y. 登録日 2018-07-25 公開日 2019-08-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Rat Xanthine oxidoreductase, D428A variant, NAD bound form To Be Published
5TSN	Crystal structures of Norwalk virus polymerase bound to an RNA primer-template duplex 分子名称: MANGANESE (II) ION, Norwalk virus polymerase, RNA (5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3') 著者 Shaik, M.M, Ng, K.K. 登録日 2016-10-30 公開日 2017-04-12 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Norovirus RNA-dependent RNA polymerase: A computational study of metal-binding preferences. Proteins, 85, 2017
6ADQ	Respiratory Complex CIII2CIV2SOD2 from Mycobacterium smegmatis 分子名称: (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate, (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate, (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate, ... 著者 Gong, H.R, Xu, A, Gao, R.G, Ji, W.X, Wang, S.H, Wang, Q, Li, J, Rao, Z.H. 登録日 2018-08-01 公開日 2018-11-14 最終更新日 2019-11-06 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 An electron transfer path connects subunits of a mycobacterial respiratory supercomplex. Science, 362, 2018
5U1A	Ferritin with Gc MtrE loop 1 inserted at His34 分子名称: CHLORIDE ION, FE (III) ION, Ferritin,MtrE protein chimera, ... 著者 Wang, S. 登録日 2016-11-28 公開日 2017-10-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-based design of ferritin nanoparticle immunogens displaying antigenic loops of Neisseria gonorrhoeae. FEBS Open Bio, 7, 2017
6AHC	Cryo-EM structure of aldehyde-alcohol dehydrogenase reveals a high-order helical architecture critical for its activity 分子名称: Aldehyde-alcohol dehydrogenase 著者 Kim, G, Song, J.J. 登録日 2018-08-17 公開日 2019-08-21 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.45 Å) 主引用文献 Aldehyde-alcohol dehydrogenase forms a high-order spirosome architecture critical for its activity. Nat Commun, 10, 2019
4XR7	Structure of the Saccharomyces cerevisiae PAN2-PAN3 core complex 分子名称: PAB-dependent poly(A)-specific ribonuclease subunit PAN2, PAB-dependent poly(A)-specific ribonuclease subunit PAN3 著者 Schafer, I.B, Rode, M, Bonneau, F, Schussler, S, Conti, E. 登録日 2015-01-20 公開日 2015-01-28 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.796 Å) 主引用文献 The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase. Nat. Struct. Mol. Biol., 21, 2014
5TVR	JMJD2A in complex with Ni(II) and alpha-Ketoglutarate 分子名称: 2-OXOGLUTARIC ACID, Lysine-specific demethylase 4A, NICKEL (II) ION, ... 著者 Cascella, B, Lee, S.G, Jez, J.M. 登録日 2016-11-09 公開日 2017-02-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.093 Å) 主引用文献 The small molecule JIB-04 disrupts O2 binding in the Fe-dependent histone demethylase KDM4A/JMJD2A. Chem. Commun. (Camb.), 53, 2017
5TXL	STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DATP 分子名称: 1,2-ETHANEDIOL, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG) P*CP*GP*CP*CP*GP)-3'), ... 著者 Das, K, Martinez, S.M, Arnold, E. 登録日 2016-11-17 公開日 2017-04-05 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.501 Å) 主引用文献 Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex That Confer Multinucleoside Drug Resistance. Antimicrob. Agents Chemother., 61, 2017
6AII	Catalytic domain of PdAgaC 分子名称: Beta-agarase, CALCIUM ION 著者 Teh, A.H, Fazli, N.H. 登録日 2018-08-23 公開日 2019-08-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Crystal structure of a neoagarobiose-producing GH16 family beta-agarase from Persicobacter sp. CCB-QB2. Appl.Microbiol.Biotechnol., 104, 2020
4XVX	Crystal structure of an acyl-ACP dehydrogenase 分子名称: 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Acyl-[acyl-carrier-protein] dehydrogenase MbtN, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, ... 著者 Chai, A, Johnston, J.M, Bunker, R.D, Lott, J.S, Baker, E.N, TB Structural Genomics Consortium (TBSGC) 登録日 2015-01-28 公開日 2015-02-11 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A covalent adduct of MbtN, an acyl-ACP dehydrogenase from Mycobacterium tuberculosis, reveals an unusual acyl-binding pocket. Acta Crystallogr.,Sect.D, 71, 2015
2MR3	A subunit of 26S proteasome lid complex 分子名称: 26S proteasome regulatory subunit RPN9 著者 Wu, Y, Hu, Y, Jin, C. 登録日 2014-06-30 公開日 2015-02-04 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of yeast Rpn9: insights into proteasome lid assembly. J. Biol. Chem., 290, 2015
2MUZ	ssNMR structure of a designed rocker protein 分子名称: designed rocker protein 著者 Wang, T, Joh, N, Wu, Y, DeGrado, W.F, Hong, M. 登録日 2014-09-18 公開日 2014-12-24 最終更新日 2015-01-14 実験手法 SOLUTION NMR 主引用文献 De novo design of a transmembrane Zn2+-transporting four-helix bundle. Science, 346, 2014
6ALA	Crystal structure of H108A peptidylglycine alpha-hydroxylating monooxygenase (PHM) in complex with citrate 分子名称: CITRATE ANION, COPPER (II) ION, GLYCEROL, ... 著者 Maheshwari, S, Rudzka, K, Gabelli, S.B, Amzel, L.M. 登録日 2017-08-07 公開日 2018-07-18 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.59 Å) 主引用文献 Effects of copper occupancy on the conformational landscape of peptidylglycine alpha-hydroxylating monooxygenase. Commun Biol, 1, 2018
2MV4	Solution structure of myristoylated Y28F/Y67F mutant of the Mason-Pfizer monkey virus matrix protein 分子名称: Matrix protein p10 著者 Dolezal, M, Hrabal, R. 登録日 2014-09-23 公開日 2015-04-01 最終更新日 2022-12-21 実験手法 SOLUTION NMR 主引用文献 Resonance assignments of the myristoylated Y28F/Y67F mutant of the Mason-Pfizer monkey virus matrix protein. Biomol.Nmr Assign., 9, 2015
6ALN	VioC L-arginine hydroxylase bound to Fe(II), 3S-hydroxy-L-arginine, and 2OG 分子名称: (2S,3S)-3-HYDROXYARGININE, 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent L-arginine hydroxylase, ... 著者 Mitchell, A.J, Dunham, N.P, Boal, A.K. 登録日 2017-08-08 公開日 2017-09-06 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Visualizing the Reaction Cycle in an Iron(II)- and 2-(Oxo)-glutarate-Dependent Hydroxylase. J. Am. Chem. Soc., 139, 2017
4XZ3	Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 (Se-Met derivative) in complex with coenzyme A and Mg-AMPPCP, phosphohistidine segment pointing towards nucleotide binding site 分子名称: Acyl-CoA synthetase (NDP forming), COENZYME A, MAGNESIUM ION, ... 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2015-02-03 公開日 2016-01-27 最終更新日 2016-02-10 実験手法 X-RAY DIFFRACTION (2.398 Å) 主引用文献 Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer. Proc.Natl.Acad.Sci.USA, 113, 2016

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