Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8OST
DownloadVisualize
BU of 8ost by Molmil
Structure of human terminal uridylyltransferase 4 (TUT4, ZCCHC11) in complex with pre-let7g miRNA and Lin28A
分子名称: Protein lin-28 homolog A, Terminal uridylyltransferase 4, ZINC ION, ...
著者Gilbert, R.J, Yi, G, Ye, M.
登録日2023-04-20
公開日2024-07-17
最終更新日2024-08-07
実験手法ELECTRON MICROSCOPY (3.69 Å)
主引用文献Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 2024
8OZN
DownloadVisualize
BU of 8ozn by Molmil
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 2 localised reconstruction
分子名称: Gag polyprotein
著者Calcraft, T, Nans, A, Rosenthal, P.B.
登録日2023-05-09
公開日2024-07-10
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry.
Cell, 187, 2024
8OZM
DownloadVisualize
BU of 8ozm by Molmil
In situ cryoEM structure of the Prototype Foamy Virus capsid, hexamer 1 localised reconstruction
分子名称: Gag polyprotein
著者Calcraft, T, Nans, A, Rosenthal, P.B.
登録日2023-05-09
公開日2024-07-10
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry.
Cell, 187, 2024
8OJG
DownloadVisualize
BU of 8ojg by Molmil
Structure of the MlaCD complex (2:6 stoichiometry)
分子名称: ABC transporter substrate-binding protein, ABC-type organic solvent transporter
著者Wotherspoon, P, Bui, S, Sridhar, P, Bergeron, J.R.C, Knowles, T.J.
登録日2023-03-24
公開日2024-07-10
実験手法ELECTRON MICROSCOPY (4.38 Å)
主引用文献The structure of the MlaC-MlaD complex reveals novel insights into periplasmic phospholipid transport processes
To Be Published
7Q0S
DownloadVisualize
BU of 7q0s by Molmil
Human GYS1-GYG1 complex inhibited-like state bound to glucose-6-phosphate
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
著者McCorvie, T.J, Shrestha, L, Froese, D.S, Ferreira, I.M, Yue, W.W.
登録日2021-10-16
公開日2022-07-27
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Molecular basis for the regulation of human glycogen synthase by phosphorylation and glucose-6-phosphate.
Nat.Struct.Mol.Biol., 29, 2022
7Q13
DownloadVisualize
BU of 7q13 by Molmil
Human GYS1-GYG1 complex activated state bound to glucose-6-phosphate, uridine diphosphate, and glucose
分子名称: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
著者McCorvie, T.J, Shrestha, L, Froese, D.S, Ferreira, I.M, Yue, W.W.
登録日2021-10-17
公開日2022-07-27
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Molecular basis for the regulation of human glycogen synthase by phosphorylation and glucose-6-phosphate.
Nat.Struct.Mol.Biol., 29, 2022
1AWV
DownloadVisualize
BU of 1awv by Molmil
CYPA COMPLEXED WITH HVGPIA
分子名称: CYCLOPHILIN A, PEPTIDE FROM THE HIV-1 CAPSID PROTEIN
著者Vajdos, F.F.
登録日1997-10-05
公開日1998-03-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Crystal structure of cyclophilin A complexed with a binding site peptide from the HIV-1 capsid protein.
Protein Sci., 6, 1997
8OZL
DownloadVisualize
BU of 8ozl by Molmil
In situ cryoEM structure of the Prototype Foamy Virus capsid, pentamer localised reconstruction
分子名称: Gag polyprotein
著者Calcraft, T, Nans, A, Rosenthal, P.B.
登録日2023-05-09
公開日2024-07-10
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry.
Cell, 187, 2024
8OZK
DownloadVisualize
BU of 8ozk by Molmil
In situ cryoEM structure of the Prototype Foamy Virus capsid, icosahedral map
分子名称: Gag polyprotein
著者Calcraft, T, Nans, A, Rosenthal, P.B.
登録日2023-05-09
公開日2024-07-10
最終更新日2024-08-21
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Integrated cryoEM structure of a spumaretrovirus reveals cross-kingdom evolutionary relationships and the molecular basis for assembly and virus entry.
Cell, 187, 2024
8PQQ
DownloadVisualize
BU of 8pqq by Molmil
Nucleoside 2'deoxyribosyltransferase from Chroococcidiopsis thermalis PCC 7203 E88Q Mutant bound to Clofarabine
分子名称: 2-CHLORO-9-(2-DEOXY-2-FLUORO-B -D-ARABINOFURANOSYL)-9H-PURIN-6-AMINE, MAGNESIUM ION, Nucleoside 2-deoxyribosyltransferase
著者Tang, P, Harding, C.J, Czekster, M.C.
登録日2023-07-11
公開日2024-02-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Snapshots of the Reaction Coordinate of a Thermophilic 2'-Deoxyribonucleoside/ribonucleoside Transferase.
Acs Catalysis, 14, 2024
1B51
DownloadVisualize
BU of 1b51 by Molmil
OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KSK
分子名称: PROTEIN (LYS-SER-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANYL (VI) ION
著者Tame, J.R.H, Wilkinson, A.J.
登録日1999-01-11
公開日1999-01-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic and calorimetric analysis of peptide binding to OppA protein.
J.Mol.Biol., 291, 1999
8PSV
DownloadVisualize
BU of 8psv by Molmil
2.7 A cryo-EM structure of in vitro assembled type 1 pilus rod
分子名称: Type-1 fimbrial protein, A chain
著者Hospenthal, M, Zyla, D, Glockshuber, R, Waksman, G.
登録日2023-07-13
公開日2024-04-10
最終更新日2024-04-17
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献The assembly platform FimD is required to obtain the most stable quaternary structure of type 1 pili.
Nat Commun, 15, 2024
6OWP
DownloadVisualize
BU of 6owp by Molmil
Horse liver F93W alcohol dehydrogenase complexed with NAD and trifluoroethanol
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ...
著者Plapp, B.V.
登録日2019-05-10
公開日2019-05-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Substitutions of Amino Acid Residues in the Substrate Binding Site of Horse Liver Alcohol Dehydrogenase Have Small Effects on the Structures but Significantly Affect Catalysis of Hydrogen Transfer.
Biochemistry, 59, 2020
1BHM
DownloadVisualize
BU of 1bhm by Molmil
RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA
分子名称: DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3'), PROTEIN (BAMHI (E.C.3.1.21.4))
著者Aggarwal, A.K, Newman, M.
登録日1995-07-12
公開日1995-07-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Bam HI endonuclease bound to DNA: partial folding and unfolding on DNA binding.
Science, 269, 1995
8PRK
DownloadVisualize
BU of 8prk by Molmil
THE R78K AND D117E ACTIVE SITE VARIANTS OF SACCHAROMYCES CEREVISIAE SOLUBLE INORGANIC PYROPHOSPHATASE: STRUCTURAL STUDIES AND MECHANISTIC IMPLICATIONS
分子名称: MANGANESE (II) ION, PHOSPHATE ION, PROTEIN (INORGANIC PYROPHOSPHATASE)
著者Tuominen, V, Heikinheimo, P, Kajander, T, Torkkel, T, Hyytia, T, Kapyla, J, Lahti, R, Cooperman, B.S, Goldman, A.
登録日1998-09-16
公開日1998-12-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The R78K and D117E active-site variants of Saccharomyces cerevisiae soluble inorganic pyrophosphatase: structural studies and mechanistic implications.
J.Mol.Biol., 284, 1998
8PFC
DownloadVisualize
BU of 8pfc by Molmil
Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the zinc finger domain of SPL5 from Arabidopsis thaliana
分子名称: Sequence-variable mosaic (SVM) signal sequence domain-containing protein, Squamosa promoter-binding-like protein 5, ZINC ION
著者Huang, W, Liu, Q, Maqbool, A, Stevenson, C.E.M, Lawson, D.M, Kamoun, S, Hogenhout, S.A.
登録日2023-06-15
公開日2023-07-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PKY
DownloadVisualize
BU of 8pky by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) Q148V variant
分子名称: FLAVIN MONONUCLEOTIDE, histidine kinase
著者Nikolaev, A, Remeeva, A, Gushchin, I.
登録日2023-06-27
公開日2023-07-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Two distinct mechanisms of flavoprotein spectral tuning revealed by low-temperature and time-dependent spectroscopy.
Protein Sci., 33, 2024
8PIF
DownloadVisualize
BU of 8pif by Molmil
Fragment 12 in complex with KLHDC2
分子名称: 1,2-ETHANEDIOL, 2-(furan-3-yl)ethanoic acid, Kelch domain-containing protein 2
著者Boettcher, J, Mayer, M.
登録日2023-06-21
公開日2023-07-12
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.782 Å)
主引用文献KLHDC2 - The Next Level
To Be Published
8PI2
DownloadVisualize
BU of 8pi2 by Molmil
Native alpha-1-antitrypsin at 1.5 Angstrom (Cys232Ser)
分子名称: 1,2-ETHANEDIOL, Alpha-1-antitrypsin, DIMETHYL SULFOXIDE, ...
著者Wang, M, Irving, J.A.
登録日2023-06-20
公開日2023-07-05
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural determinants of instability in alpha-1-antitrypsin
To Be Published
8PHO
DownloadVisualize
BU of 8pho by Molmil
Portal from the Borrelia bacteriophage BB1 procapsid
分子名称: Phage portal protein
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-20
公開日2023-07-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PM1
DownloadVisualize
BU of 8pm1 by Molmil
Structure of Chloroflexus aggregans flavin based fluorescent protein (CagFbFP) variant I52V A85Q
分子名称: FLAVIN MONONUCLEOTIDE, histidine kinase
著者Nikolaev, A, Remeeva, A, Gushchin, I.
登録日2023-06-27
公開日2023-07-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Two distinct mechanisms of flavoprotein spectral tuning revealed by low-temperature and time-dependent spectroscopy.
Protein Sci., 33, 2024
8PHT
DownloadVisualize
BU of 8pht by Molmil
Scaffold rings inside the Borrelia bacteriophage BB1 procapsid
分子名称: Scaffold protein
著者Rumnieks, J, Fuzik, T, Tars, K.
登録日2023-06-20
公開日2023-07-12
最終更新日2023-11-15
実験手法ELECTRON MICROSCOPY (6.37 Å)
主引用文献Structure of the Borrelia Bacteriophage phi BB1 Procapsid.
J.Mol.Biol., 435, 2023
8PFD
DownloadVisualize
BU of 8pfd by Molmil
Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the von Willebrand Factor Type A domain of the proteasomal ubiquitin receptor Rpn10 from Arabidopsis thaliana
分子名称: 26S proteasome non-ATPase regulatory subunit 4 homolog, Sequence-variable mosaic (SVM) signal sequence domain-containing protein
著者Huang, W, Liu, Q, Maqbool, A, Stevenson, C.E.M, Lawson, D.M, Kamoun, S, Hogenhout, S.A.
登録日2023-06-15
公開日2023-07-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Bimodular architecture of bacterial effector SAP05 that drives ubiquitin-independent targeted protein degradation.
Proc.Natl.Acad.Sci.USA, 120, 2023
8PFY
DownloadVisualize
BU of 8pfy by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with K2[Ru2(DAniF)(CO3)3] in condition B
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Lysozyme C, ...
著者Teran, A, Ferraro, G, Merlino, A.
登録日2023-06-16
公開日2023-07-19
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023
8PFV
DownloadVisualize
BU of 8pfv by Molmil
X-ray structure of the adduct formed upon reaction of Lysozyme with [Ru2Cl(DAniF)(O2CCH3)3] in condition A
分子名称: 9,11-bis(4-methoxyphenyl)-3,7-dimethyl-2,4,6,8-tetraoxa-9,11-diaza-1$l^{4},5$l^{4}-diruthenatricyclo[3.3.3.0^{1,5}]undecane, CHLORIDE ION, Lysozyme C, ...
著者Teran, A, Ferraro, G, Merlino, A.
登録日2023-06-16
公開日2023-07-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Charge effect in protein metalation reactions by diruthenium complexes
Inorg Chem Front, 2023

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon