Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1GB5
DownloadVisualize
BU of 1gb5 by Molmil
CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日2000-06-26
公開日2000-07-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of surface hydrophobic residues in the conformational stability of human lysozyme at three different positions.
Biochemistry, 39, 2000
1GEJ
DownloadVisualize
BU of 1gej by Molmil
STRUCTURAL CHARACTERIZATION OF N-BUTYL-ISOCYANIDE COMPLEXES OF CYTOCHROMES P450NOR AND P450CAM
分子名称: CYTOCHROME P450 55A1, N-BUTYL ISOCYANIDE, PROTOPORPHYRIN IX CONTAINING FE
著者lee, D.-S, Park, S.-Y, Yamane, K, Shiro, Y.
登録日2000-11-13
公開日2000-12-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural characterization of n-butyl-isocyanide complexes of cytochromes P450nor and P450cam.
Biochemistry, 40, 2001
1GF0
DownloadVisualize
BU of 1gf0 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
1GF6
DownloadVisualize
BU of 1gf6 by Molmil
BURIED POLAR MUTANT HUMAN LYSOZYME
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Yutani, K.
登録日2000-11-30
公開日2001-04-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of polar groups in the interior of a protein to the conformational stability.
Biochemistry, 40, 2001
3OFU
DownloadVisualize
BU of 3ofu by Molmil
Crystal Structure of Cytochrome P450 CYP101C1
分子名称: (3E)-4-(2,6,6-trimethylcyclohex-1-en-1-yl)but-3-en-2-one, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Zhou, W, Ma, M, Bell, S.G, Yang, W, Hao, Y, Rees, N.H, Bartlam, M, Wong, L.-L, Rao, Z.
登録日2010-08-16
公開日2011-05-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Analysis of CYP101C1 from Novosphingobium aromaticivorans DSM12444.
Chembiochem, 12, 2011
5JMU
DownloadVisualize
BU of 5jmu by Molmil
The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656
分子名称: ACETATE ION, MAGNESIUM ION, Peptidoglycan N-acetylglucosamine deacetylase, ...
著者Tan, K, Gu, M, Clancy, S, Joachimiak, A.
登録日2016-04-29
公開日2016-06-29
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献The crystal structure of the catalytic domain of peptidoglycan N-acetylglucosamine deacetylase from Eubacterium rectale ATCC 33656 (CASP target)
To Be Published
1GFE
DownloadVisualize
BU of 1gfe by Molmil
CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS
分子名称: LYSOZYME, SODIUM ION
著者Funahashi, J, Takano, K, Yamagata, Y, Yutani, K.
登録日2000-12-04
公開日2000-12-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Positive contribution of hydration structure on the surface of human lysozyme to the conformational stability.
J.Biol.Chem., 277, 2002
1G0G
DownloadVisualize
BU of 1g0g by Molmil
CRYSTAL STRUCTURE OF T4 LYSOZYME MUTANT T152A
分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME)
著者Xu, J, Baase, W.A, Quillin, M.L, Matthews, B.W.
登録日2000-10-06
公開日2001-05-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.
Protein Sci., 10, 2001
1SDY
DownloadVisualize
BU of 1sdy by Molmil
STRUCTURE SOLUTION AND MOLECULAR DYNAMICS REFINEMENT OF THE YEAST CU,ZN ENZYME SUPEROXIDE DISMUTASE
分子名称: COPPER (II) ION, COPPER,ZINC SUPEROXIDE DISMUTASE, ZINC ION
著者Djinovic, K, Gatti, G, Coda, A, Antolini, L, Pelosi, G, Desideri, A, Falconi, M, Marmocchi, F, Rotilio, G, Bolognesi, M.
登録日1991-06-14
公開日1994-01-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure solution and molecular dynamics refinement of the yeast Cu,Zn enzyme superoxide dismutase.
Acta Crystallogr.,Sect.B, 47, 1991
1G0K
DownloadVisualize
BU of 1g0k by Molmil
CRYSTAL STRUCTURE OF T4 LYSOZYME MUTANT T152C
分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME)
著者Xu, J, Baase, W.A, Quillin, M.L, Matthews, B.W.
登録日2000-10-06
公開日2001-05-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.
Protein Sci., 10, 2001
4Y5R
DownloadVisualize
BU of 4y5r by Molmil
Crystal Structure of a T67A MauG/pre-Methylamine Dehydrogenase Complex
分子名称: CALCIUM ION, HEME C, Methylamine dehydrogenase heavy chain, ...
著者Li, C, Wilmot, C.M.
登録日2015-02-11
公開日2015-06-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A T67A mutation in the proximal pocket of the high-spin heme of MauG stabilizes formation of a mixed-valent Fe(II)/Fe(III) state and enhances charge resonance stabilization of the bis-Fe(IV) state.
Biochim.Biophys.Acta, 1847, 2015
4MP6
DownloadVisualize
BU of 4mp6 by Molmil
Staphyloferrin B precursor biosynthetic enzyme SbnB bound to citrate and NAD+
分子名称: CITRIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Putative ornithine cyclodeaminase
著者Grigg, J.C, Kobylarz, M.J, Rai, D.K, Murphy, M.E.P.
登録日2013-09-12
公開日2014-03-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Synthesis of L-2,3-diaminopropionic Acid, a siderophore and antibiotic precursor.
Chem.Biol., 21, 2014
1G19
DownloadVisualize
BU of 1g19 by Molmil
STRUCTURE OF RECA PROTEIN
分子名称: PHOSPHATE ION, RECA PROTEIN
著者Datta, S, Prabu, M.M, Vaze, M.B, Ganesh, N, Chandra, N.R, Muniyappa, K, Vijayan, M, TB Structural Genomics Consortium (TBSGC)
登録日2000-10-11
公開日2000-12-11
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structures of Mycobacterium tuberculosis RecA and its complex with ADP-AlF(4): implications for decreased ATPase activity and molecular aggregation
Nucleic Acids Res., 28, 2000
7EXW
DownloadVisualize
BU of 7exw by Molmil
GH127 beta-L-arabinofuranosidase HypBA1 covalently complexed with alpha-L-arabinofuranosylamide
分子名称: 2-bromanyl-N-[(2R,3R,4R,5S}-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]ethanamide, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
著者Sawano, K, Arakawa, T, Yamada, C, Fujita, K, Fushinobu, S.
登録日2021-05-28
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Substrate complex structure, active site labeling and catalytic role of the zinc ion in cysteine glycosidase.
Glycobiology, 32, 2022
7EXU
DownloadVisualize
BU of 7exu by Molmil
GH127 beta-L-arabinofuranosidase HypBA1 E322Q mutant complexed with p-nitrophenyl beta-L-arabinofuranoside
分子名称: (2S,3R,4R,5R)-2-(hydroxymethyl)-5-(4-nitrophenoxy)oxolane-3,4-diol, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
著者Maruyama, S, Arakawa, T, Yamada, C, Fujita, K, Fushinobu, S.
登録日2021-05-28
公開日2021-11-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Substrate complex structure, active site labeling and catalytic role of the zinc ion in cysteine glycosidase.
Glycobiology, 32, 2022
1FWF
DownloadVisualize
BU of 1fwf by Molmil
KLEBSIELLA AEROGENES UREASE, C319D VARIANT
分子名称: NICKEL (II) ION, UREASE
著者Pearson, M.A, Karplus, P.A.
登録日1997-04-23
公開日1997-10-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of Cys319 variants and acetohydroxamate-inhibited Klebsiella aerogenes urease.
Biochemistry, 36, 1997
4N5F
DownloadVisualize
BU of 4n5f by Molmil
Crystal Structure of a Putative acyl-CoA dehydrogenase with bound FADH2 from Burkholderia cenocepacia J2315
分子名称: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, Putative acyl-CoA dehydrogenase, UNKNOWN ATOM OR ION
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2013-10-09
公開日2013-10-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of a Putative acyl-CoA dehydrogenase with bound FADH2 from Burkholderia cenocepacia J2315
TO BE PUBLISHED
5I4M
DownloadVisualize
BU of 5i4m by Molmil
Crystal structure of Amidase, hydantoinase/carbamoylase family from Burkholderia vietnamiensis
分子名称: 3-PHOSPHOGLYCERIC ACID, Amidase, hydantoinase/carbamoylase family, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2016-02-12
公開日2016-03-02
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of Amidase, hydantoinase/carbamoylase family from Burkholderia vietnamiensis
to be published
7EXV
DownloadVisualize
BU of 7exv by Molmil
GH127 beta-L-arabinofuranosidase HypBA1 covalently complexed with beta-L-arabinofuranoylamide
分子名称: 2-bromanyl-N-[(2S,3R,4R,5S)-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]ethanamide, Non-reducing end beta-L-arabinofuranosidase, ZINC ION
著者Sawano, K, Arakawa, T, Yamada, C, Fujita, K, Fushinobu, S.
登録日2021-05-28
公開日2021-11-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Substrate complex structure, active site labeling and catalytic role of the zinc ion in cysteine glycosidase.
Glycobiology, 32, 2022
3OEB
DownloadVisualize
BU of 3oeb by Molmil
Crystal structure of the Q121E mutant of C.polysaccharolyticus CBM16-1 bound to mannopentaose
分子名称: CALCIUM ION, S-layer associated multidomain endoglucanase, SULFATE ION, ...
著者Agarwal, V, Nair, S.K.
登録日2010-08-12
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Mutational insights into the roles of amino acid residues in ligand binding for two closely related family 16 carbohydrate binding modules.
J.Biol.Chem., 285, 2010
1G1V
DownloadVisualize
BU of 1g1v by Molmil
T4 LYSOZYME MUTANT C54T/C97A/I58T
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME
著者Quillin, M.L, Matthews, B.W.
登録日2000-10-13
公開日2001-05-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme.
Protein Sci., 10, 2001
4MUR
DownloadVisualize
BU of 4mur by Molmil
Crystal structure of vancomycin resistance D,D-dipeptidase/D,D-pentapeptidase VanXYc D59S mutant
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, D,D-dipeptidase/D,D-carboxypeptidase, ...
著者Stogios, P.J, Evdokimova, E, Meziane-Cherif, D, Di Leo, R, Yim, V, Courvalin, P, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-09-23
公開日2013-10-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for the evolution of vancomycin resistance D,D-peptidases.
Proc.Natl.Acad.Sci.USA, 111, 2014
1RXW
DownloadVisualize
BU of 1rxw by Molmil
Crystal structure of A. fulgidus FEN-1 bound to DNA
分子名称: 5'-d(*C*pG*pA*pT*pG*pC*pT*pA)-3', 5'-d(*T*pA*pG*pC*pA*pT*pC*pG*pG)-3', Flap structure-specific endonuclease
著者Chapados, B.R, Hosfield, D.J, Han, S, Qiu, J, Yelent, B, Shen, B, Tainer, J.A.
登録日2003-12-18
公開日2004-01-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for FEN-1 Substrate Specificity and PCNA-Mediated Activation in DNA Replication and Repair
Cell(Cambridge,Mass.), 116, 2004
3OCI
DownloadVisualize
BU of 3oci by Molmil
Crystal structure of TBP (TATA box binding protein)
分子名称: 1,2-ETHANEDIOL, TRANSCRIPTION INITIATION FACTOR TFIID (TFIID-1)
著者Cui, S, Wollmann, P, Moldt, M, Hopfner, K.-P.
登録日2010-08-10
公開日2011-07-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP.
Nature, 475, 2011
3OFT
DownloadVisualize
BU of 3oft by Molmil
Crystal Structure of Cytochrome P450 CYP101C1
分子名称: (2R,5R)-hexane-2,5-diol, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Zhou, W, Ma, M, Bell, S.G, Yang, W, Hao, Y, Rees, N.H, Bartlam, M, Wong, L.-L, Rao, Z.
登録日2010-08-16
公開日2011-07-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of CYP101C1 from Novosphingobium aromaticivorans DSM12444.
Chembiochem, 12, 2011

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon