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7MRI
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Crystal structure of N63T yeast iso-1-cytochrome c
分子名称: Cytochrome c isoform 1, HEME C
著者Lei, H, Bowler, B.E, Evenson, G.E.
登録日2021-05-07
公開日2022-05-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Effect on intrinsic peroxidase activity of substituting coevolved residues from Omega-loop C of human cytochrome c into yeast iso-1-cytochrome c.
J.Inorg.Biochem., 232, 2022
3AFG
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BU of 3afg by Molmil
Crystal structure of ProN-Tk-SP from Thermococcus kodakaraensis
分子名称: CALCIUM ION, Subtilisin-like serine protease
著者Foophow, T, Tanaka, S, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
登録日2010-03-01
公開日2010-08-04
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: requirement of a C-terminal beta-jelly roll domain for hyperstability.
J.Mol.Biol., 400, 2010
4AZA
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BU of 4aza by Molmil
Improved eIF4E binding peptides by phage display guided design.
分子名称: EIF4G1_D5S PEPTIDE, EUKARYOTIC TRANSLATION INITIATION FACTOR 4E, [[(2R,3S,4R,5R)-5-(6-AMINO-3-METHYL-4-OXO-5H-IMIDAZO[4,5-C]PYRIDIN-1-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHOXY-HYDROXY-PHOSPHORYL] PHOSPHONO HYDROGEN PHOSPHATE
著者Chew, W.Z, Quah, S.T, Verma, C.S, Liu, Y, Lane, D.P, Brown, C.J.
登録日2012-06-25
公開日2012-08-08
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Improved Eif4E Binding Peptides by Phage Display Guided Design: Plasticity of Interacting Surfaces Yield Collective Effects.
Plos One, 7, 2012
3IQV
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BU of 3iqv by Molmil
Crystal Structure of human 14-3-3 sigma in Complex with Raf1 peptide (6mer) and stabilisator Fusicoccin
分子名称: 14-3-3 protein sigma, 6-mer peptide from RAF proto-oncogene serine/threonine-protein kinase, CHLORIDE ION, ...
著者Ottmann, C, Weyand, M.
登録日2009-08-21
公開日2010-09-01
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Impaired binding of 14-3-3 to C-RAF in Noonan syndrome suggests new approaches in diseases with increased Ras signaling.
Mol.Cell.Biol., 30, 2010
2YK3
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BU of 2yk3 by Molmil
CRITHIDIA FASCICULATA CYTOCHROME C
分子名称: CYTOCHROME C, HEME C, SULFATE ION
著者Fulop, V, Sam, K.A, Ferguson, S.J, Ginger, M.L, Allen, J.W.A.
登録日2011-05-25
公開日2011-06-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure of a Trypanosomatid Mitochondrial Cytochrome C with Heme Attached Via Only One Thioether Bond and Implications for the Substrate Recognition Requirements of Heme Lyase.
FEBS J., 276, 2009
3N89
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KH domains
分子名称: Defective in germ line development protein 3, isoform a
著者Nakel, K, Hartung, S.A, Bonneau, F, Eckmann, C.R, Conti, E.
登録日2010-05-28
公開日2010-09-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.789 Å)
主引用文献Four KH domains of the C. elegans Bicaudal-C ortholog GLD-3 form a globular structural platform.
Rna, 16, 2010
1MG7
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Crystal Structure of xol-1
分子名称: early switch protein xol-1 2.2k splice form
著者Luz, J.G, Hassig, C.A, Godzik, A, Meyer, B.J, Wilson, I.A.
登録日2002-08-14
公開日2003-04-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献XOL-1, primary determinant of sexual fate in C. elegans, is a GHMP kinase family member and a structural prototype for a class of developmental regulators
Genes Dev., 17, 2003
1YDK
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Crystal structure of the I219A mutant of human glutathione transferase A1-1 with S-hexylglutathione
分子名称: Glutathione S-transferase A1, S-HEXYLGLUTATHIONE
著者Kuhnert, D.C, Sayed, Y, Mosebi, S, Sayed, M, Sewell, T, Dirr, H.W.
登録日2004-12-24
公開日2005-06-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Tertiary Interactions Stabilise the C-terminal Region of Human Glutathione Transferase A1-1: a Crystallographic and Calorimetric Study.
J.Mol.Biol., 349, 2005
3N97
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RNA polymerase alpha C-terminal domain (E. coli) and sigma region 4 (T. aq. mutant) bound to (UP,-35 element) DNA
分子名称: ACETATE ION, DNA (5'-D(*CP*CP*AP*TP*GP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*TP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*AP*AP*AP*AP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP*CP*AP*TP*GP*G)-3'), ...
著者Lara-Gonzalez, S, Birktoft, J.J, Lawson, C.L.
登録日2010-05-28
公開日2011-06-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.252 Å)
主引用文献The RNA Polymerase alpha Subunit Recognizes the DNA Shape of the Upstream Promoter Element.
Biochemistry, 59, 2020
4JHS
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BU of 4jhs by Molmil
Crystal structure of a C-terminal two domain fragment of human beta-2-glycoprotein 1
分子名称: Beta-2-glycoprotein 1, SULFATE ION
著者Bonanno, J.B, Toro, R, Gizzi, A, Chan, M.K, Garrett-Thomson, S.C, Patel, H, Lim, S, Matikainen, B, Celikgil, A, Garforth, S, Hillerich, B, Seidel, R, Rand, J.H, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2013-03-05
公開日2013-04-24
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of a C-terminal two domain fragment of human beta-2-glycoprotein 1
To be Published
1OS6
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BU of 1os6 by Molmil
Cytochrome c7 (PpcA) from Geobacter sulfurreducens
分子名称: (3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID, HEME C, PpcA, ...
著者Pokkuluri, P.R, Londer, Y.Y, Duke, N.E.C, Long, W.C, Schiffer, M.
登録日2003-03-18
公開日2004-02-03
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Family of cytochrome c7-type proteins from Geobacter sulfurreducens: structure of one cytochrome c7 at 1.45 A resolution.
Biochemistry, 43, 2004
3QIU
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Crystal structure of the 226 TCR in complex with MCC/I-Ek
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, H-2 CLASS II HISTOCOMPATIBILITY ANTIGEN, E-K alpha chain, ...
著者Kruse, A.C, Ely, L.K, Newell, E.W, Davis, M.M, Garcia, K.C.
登録日2011-01-27
公開日2011-04-27
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of specificity and cross-reactivity in T cell receptors specific for cytochrome c-I-E(k).
J.Immunol., 186, 2011
3D5M
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Crystal structure of HCV NS5B polymerase with a novel pyridazinone inhibitor
分子名称: N-({3-[(5S)-5-tert-butyl-1-(3-chloro-4-fluorobenzyl)-4-hydroxy-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]-1,1-dioxido-1,2-benzis othiazol-7-yl}methyl)methanesulfonamide, RNA-directed RNA polymerase
著者Zhao, Q, Showalter, R.E, Han, Q, Kissinger, C.R.
登録日2008-05-16
公開日2009-05-19
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-based design, synthesis, and biological evaluation of 1,1-dioxoisothiazole and benzo[b]thiophene-1,1-dioxide derivatives as novel inhibitors of hepatitis C virus NS5B polymerase.
Bioorg.Med.Chem.Lett., 18, 2008
1KX2
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Minimized average structure of a mono-heme ferrocytochrome c from Shewanella putrefaciens
分子名称: HEME C, mono-heme c-type cytochrome ScyA
著者Bartalesi, I, Bertini, I, Hajieva, P, Rosato, A, Vasos, P.R.
登録日2002-01-30
公開日2002-02-13
最終更新日2024-10-16
実験手法SOLUTION NMR
主引用文献Solution structure of a monoheme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications.
Biochemistry, 41, 2002
1KX7
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Family of 30 conformers of a mono-heme ferrocytochrome c from Shewanella putrefaciens solved by NMR
分子名称: HEME C, mono-heme c-type cytochrome ScyA
著者Bartalesi, I, Bertini, I, Hajieva, P, Rosato, A, Vasos, P.R.
登録日2002-01-31
公開日2002-02-13
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Solution structure of a monoheme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications.
Biochemistry, 41, 2002
3D28
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Crystal structure of hcv ns5b polymerase with a novel benzisothiazole inhibitor
分子名称: (5S)-1-benzyl-3-(1,1-dioxido-1,2-benzisothiazol-3-yl)-4-hydroxy-5-(1-methylethyl)-1,5-dihydro-2H-pyrrol-2-one, RNA-directed RNA polymerase
著者Han, Q, Showalter, R.E, Zhao, Q, Kissinger, C.R.
登録日2008-05-07
公開日2009-05-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-based design, synthesis, and biological evaluation of 1,1-dioxoisothiazole and benzo[b]thiophene-1,1-dioxide derivatives as novel inhibitors of hepatitis C virus NS5B polymerase.
Bioorg.Med.Chem.Lett., 18, 2008
1U5M
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Structure of a Chordin-like Cysteine-rich Repeat (VWC module) from Collagen IIA
分子名称: alpha 1 type II collagen isoform 1
著者O'Leary, J.M, Hamilton, J.m, Deane, C.M, Valeyev, N.V, Sandell, L.J, Downing, A.K.
登録日2004-07-28
公開日2004-10-05
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of a prototypical chordin-like cysteine-rich repeat (von Willebrand Factor type C module) from collagen IIA
J.Biol.Chem., 279, 2004
1D4D
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CRYSTAL STRUCTURE OF THE SUCCINATE COMPLEXED FORM OF THE FLAVOCYTOCHROME C FUMARATE REDUCTASE OF SHEWANELLA PUTREFACIENS STRAIN MR-1
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, FLAVOCYTOCHROME C FUMARATE REDUCTASE, HEME C, ...
著者Leys, D, Tsapin, A.S, Meyer, T.E, Cusanovich, M.A, Van Beeumen, J.J.
登録日1999-10-03
公開日1999-12-01
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and mechanism of the flavocytochrome c fumarate reductase of Shewanella putrefaciens MR-1.
Nat.Struct.Biol., 6, 1999
5MVO
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FoxE P43212 crystal structure of Rhodopseudomonas ferrooxidans SW2 putative iron oxidase
分子名称: COPPER (II) ION, FoxE, HEME C, ...
著者Pereira, L, Saraiva, I.H, Oliveira, A.S, Soares, C, Gomes, R.O, Frazao, C.
登録日2017-01-17
公開日2018-02-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.668 Å)
主引用文献Crystallization and preliminary crystallographic studies of FoxE from Rhodobacter ferrooxidans SW2, an Fe(II) oxidoreductase involved in photoferrotrophy.
Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun., 68, 2012
1D0H
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THE HC FRAGMENT OF TETANUS TOXIN COMPLEXED WITH N-ACETYL-GALACTOSAMINE
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, PROTEIN (TETANUS TOXIN HC), SULFATE ION
著者Emsley, P, Fotinou, C, Black, I, Fairweather, N.F, Charles, I.G, Watts, C, Hewitt, E, Isaacs, N.W.
登録日1999-09-10
公開日2000-03-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structures of the H(C) fragment of tetanus toxin with carbohydrate subunit complexes provide insight into ganglioside binding.
J.Biol.Chem., 275, 2000
1DFQ
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THE HC FRAGMENT OF TETANUS TOXIN COMPLEXED WITH SIALIC ACID
分子名称: N-acetyl-beta-neuraminic acid, TETANUS TOXIN HC
著者Emsley, P, Fotinou, C, Black, I, Fairweather, N.F, Charles, I.G, Watts, C, Hewitt, E, Isaacs, N.W.
登録日1999-11-20
公開日2000-03-24
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The structures of the H(C) fragment of tetanus toxin with carbohydrate subunit complexes provide insight into ganglioside binding.
J.Biol.Chem., 275, 2000
4Q96
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CID of human RPRD1B in complex with an unmodified CTD peptide
分子名称: RPB1-CTD, Regulation of nuclear pre-mRNA domain-containing protein 1B, SULFATE ION, ...
著者Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
登録日2014-04-29
公開日2014-06-04
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
3ZYU
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Crystal Structure of the first bromodomain of human BRD4 in complex with I-BET151(GSK1210151A)
分子名称: 1,2-ETHANEDIOL, 7-(3,5-DIMETHYL-1,2-OXAZOL-4-YL)-8-METHOXY-1-[(1R)-1-(PYRIDIN-2-YL)ETHYL]-1H,2H,3H-IMIDAZO[4,5-C]QUINOLIN-2-ONE, BROMODOMAIN-CONTAINING PROTEIN 4
著者Chung, C.W, Mirguet, O.
登録日2011-08-25
公開日2011-11-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of Bet Recruitment to Chromatin as an Effective Treatment for Mll-Fusion Leukaemia.
Nature, 478, 2011
4E93
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Crystal structure of human Feline Sarcoma Viral Oncogene Homologue (v-FES)in complex with TAE684
分子名称: 5-CHLORO-N-[2-METHOXY-4-[4-(4-METHYLPIPERAZIN-1-YL)PIPERIDIN-1-YL]PHENYL]-N'-(2-PROPAN-2-YLSULFONYLPHENYL)PYRIMIDINE-2,4-DIAMINE, Tyrosine-protein kinase Fes/Fps
著者Filippakopoulos, P, Salah, E, Miduturu, C.V, Fedorov, O, Cooper, C, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Gray, N.S, Knapp, S, Structural Genomics Consortium (SGC)
登録日2012-03-20
公開日2012-04-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Small-Molecule Inhibitors of the c-Fes Protein-Tyrosine Kinase.
Chem.Biol., 19, 2012
4AEJ
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Crystal structure of Human fibrillar procollagen type III C- propeptide trimer
分子名称: CALCIUM ION, COLLAGEN ALPHA-1(III) CHAIN, GLYCEROL
著者Bourhis, J.M, Mariano, N, Zhao, Y, Harlos, K, Jones, E.Y, Moali, C, Aghajari, N, Hulmes, D.J.S.
登録日2012-01-11
公開日2012-09-12
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structural Basis of Fibrillar Collagen Trimerization and Related Genetic Disorders.
Nat.Struct.Mol.Biol., 19, 2012

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