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6ZHL
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BU of 6zhl by Molmil
Crystal Structure of Staphylococcus aureus RsgA bound to ppGpp.
分子名称: 1,2-ETHANEDIOL, GUANOSINE-5',3'-TETRAPHOSPHATE, Small ribosomal subunit biogenesis GTPase RsgA, ...
著者Bennison, D.J, Rafferty, J.B, Corrigan, R.M.
登録日2020-06-23
公開日2021-06-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献The Stringent Response Inhibits 70S Ribosome Formation in Staphylococcus aureus by Impeding GTPase-Ribosome Interactions.
Mbio, 12, 2021
7BCE
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BU of 7bce by Molmil
Notum Fragment 718
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[(4-methylpiperidin-1-yl)methyl]-1H-indole, DIMETHYL SULFOXIDE, ...
著者Zhao, Y, Jones, E.Y.
登録日2020-12-19
公開日2025-10-15
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
5YGR
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BU of 5ygr by Molmil
Crystal structure of PLP bound Diaminopropionate ammonia lyase from Salmonella typhimurium
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Diaminopropionate ammonia lyase, ...
著者Geeta, D, Shveta, B, Shavithri, H.S, Murthy, M.R.N.
登録日2017-09-25
公開日2018-03-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Comparative structural and enzymatic studies on Salmonella typhimurium diaminopropionate ammonia lyase reveal its unique features
J. Struct. Biol., 202, 2018
4YES
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BU of 4yes by Molmil
Thrombin in complex with (S)-(4-chloro-2-((1-(5-methyl-1H-pyrrole-2-carbonyl)pyrrolidine-2-carboxamido)methyl)phenyl)methanaminium
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Hirudin, ...
著者Orth, P.
登録日2015-02-24
公開日2015-06-17
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Improved Stability of Proline-Derived Direct Thrombin Inhibitors through Hydroxyl to Heterocycle Replacement.
Acs Med.Chem.Lett., 6, 2015
6XC1
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BU of 6xc1 by Molmil
Crystal structure of bacteriophage T4 spackle and lysozyme in orthorhombic form
分子名称: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, Lysozyme, ...
著者Shi, K, Oakland, J.T, Kurniawan, F, Moeller, N.H, Aihara, H.
登録日2020-06-07
公開日2020-12-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis of superinfection exclusion by bacteriophage T4 Spackle.
Commun Biol, 3, 2020
8FV3
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BU of 8fv3 by Molmil
EGFR(T790M/V948R) in complex with compound 1 (LN4503)
分子名称: Epidermal growth factor receptor, MAGNESIUM ION, N-{(4P)-4-[(4P)-5-{3-[(8-fluoro-11-oxo-5,11-dihydro-10H-dibenzo[b,e][1,4]diazepin-10-yl)methyl]phenyl}-2-(methylsulfanyl)-1H-imidazol-4-yl]pyridin-2-yl}acetamide, ...
著者Ogboo, B.C, Heppner, D.E.
登録日2023-01-18
公開日2024-01-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Linking ATP and allosteric sites to achieve superadditive binding with bivalent EGFR kinase inhibitors.
Commun Chem, 7, 2024
6S4P
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BU of 6s4p by Molmil
The crystal structure of glycogen phosphorylase in complex with 13
分子名称: (2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-(4-naphthalen-2-yl-1,3-thiazol-2-yl)oxane-3,4,5-triol, Glycogen phosphorylase, muscle form, ...
著者Kyriakis, E, Solovou, T.G.A, Papaioannou, O.S.E, Skamnaki, V.T, Leonidas, D.D.
登録日2019-06-28
公開日2020-02-19
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献The architecture of hydrogen and sulfur sigma-hole interactions explain differences in the inhibitory potency of C-beta-d-glucopyranosyl thiazoles, imidazoles and an N-beta-d glucopyranosyl tetrazole for human liver glycogen phosphorylase and offer new insights to structure-based design.
Bioorg.Med.Chem., 28, 2020
8UO6
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BU of 8uo6 by Molmil
HIV-1 Rev Response Element (RRE) Stem-Loop II (SLII)
分子名称: HIV-1 Rev Response Element Stem-Loop II with tRNA scaffold
著者Tipo, J, Gottipati, K, Choi, K.
登録日2023-10-19
公開日2024-06-05
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure of HIV-1 RRE stem-loop II identifies two conformational states of the high-affinity Rev binding site.
Nat Commun, 15, 2024
9EZ3
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BU of 9ez3 by Molmil
Crystal structure of human CLK3 bound to RN129
分子名称: 1-(5-~{tert}-butyl-2-quinolin-6-yl-pyrazol-3-yl)-3-[3-(4-morpholin-4-yl-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl)phenyl]urea, Dual specificity protein kinase CLK3, SULFATE ION
著者Kraemer, A, Raig, N, Knapp, S.
登録日2024-04-10
公開日2024-09-11
最終更新日2025-09-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Type II kinase inhibitors that target Parkinson's disease-associated LRRK2.
Sci Adv, 11, 2025
8QM5
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BU of 8qm5 by Molmil
Potential drug binding sites for translation initiation factor eIF4E
分子名称: 1-(4-chlorophenyl)cyclopentane-1-carboxylic acid, Eukaryotic translation initiation factor 4E, TRIETHYLENE GLYCOL
著者Cleasby, A.
登録日2023-09-21
公開日2025-01-15
最終更新日2025-03-12
実験手法X-RAY DIFFRACTION (1.889 Å)
主引用文献Integrating fragment-based screening with targeted protein degradation and genetic rescue to explore eIF4E function.
Nat Commun, 15, 2024
6H2V
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BU of 6h2v by Molmil
Crystal structure of human METTL5-TRMT112 complex, the 18S rRNA m6A1832 methyltransferase at 2.5A resolution
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, DI(HYDROXYETHYL)ETHER, ...
著者van Tran, N, Graille, M.
登録日2018-07-16
公開日2019-07-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The human 18S rRNA m6A methyltransferase METTL5 is stabilized by TRMT112.
Nucleic Acids Res., 47, 2019
344D
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BU of 344d by Molmil
DETERMINATION BY MAD-DM OF THE STRUCTURE OF THE DNA DUPLEX D(ACGTACG(5-BRU))2 AT 1.46A AND 100K
分子名称: DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*(BRU))-3')
著者Todd, A.R, Adams, A, Powell, H.R, Cardin, C.J.
登録日1997-08-04
公開日1997-09-26
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Determination by MAD-DM of the structure of the DNA duplex d[ACGTACG(5-BrU)]2 at 1.46 A and 100 K.
Acta Crystallogr.,Sect.D, 55, 1999
9E6Y
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BU of 9e6y by Molmil
Structure of CD112 (Nectin-2) domain 1 bound to CD112R (PVRIG)
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Nectin-2, ...
著者Luca, V.C, Singh, S.
登録日2024-10-31
公開日2025-05-07
最終更新日2025-08-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure-guided engineering of CD112 receptor variants for optimized immunotherapy.
Mol.Ther., 33, 2025
7AGI
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BU of 7agi by Molmil
The structure of Artemis variant H35D
分子名称: 1,2-ETHANEDIOL, Protein artemis, ZINC ION
著者Yosaatmadja, Y, Goubin, S, Newman, J.A, Mukhopadhyay, S.M.M, Dannerfjord, A.A, Burgess-Brown, N.A, von Delft, F, Arrowsmith, C.H, Bountra, C, Gileadi, O.
登録日2020-09-22
公開日2020-10-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and mechanistic insights into the Artemis endonuclease and strategies for its inhibition.
Nucleic Acids Res., 49, 2021
6Y6H
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BU of 6y6h by Molmil
Crystal structure of STK17b (DRAK2) in complex with UNC-AP-194 probe
分子名称: 1,2-ETHANEDIOL, 2-[6-(1-benzothiophen-2-yl)thieno[3,2-d]pyrimidin-4-yl]sulfanylethanoic acid, Serine/threonine-protein kinase 17B
著者Chaikuad, A, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Drewry, D, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-02-26
公開日2020-03-11
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.
J.Med.Chem., 63, 2020
6RYZ
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BU of 6ryz by Molmil
SalL with S-adenosyl methionine
分子名称: 1,2-ETHANEDIOL, Adenosyl-chloride synthase, CHLORIDE ION, ...
著者McKean, I, Frese, A, Cuetos, A, Burley, G, Grogan, G.
登録日2019-06-12
公開日2020-04-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献S-Adenosyl Methionine Cofactor Modifications Enhance the Biocatalytic Repertoire of Small Molecule C-Alkylation.
Angew.Chem.Int.Ed.Engl., 58, 2019
8Q0T
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BU of 8q0t by Molmil
Identification and optimisation of novel inhibitors of the Polyketide synthetase 13 thioesterase domain with antitubercular activity
分子名称: 3-(3,4-dimethoxyphenyl)-~{N}-[2-(3,4-dimethoxyphenyl)ethyl]-1,2,4-oxadiazole-5-carboxamide, Polyketide synthase Pks13
著者Eadsforth, T.C, Punekar, A.S, Green, S.R, Baragana, B.
登録日2023-07-29
公開日2023-11-22
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Identification and Optimization of Novel Inhibitors of the Polyketide Synthase 13 Thioesterase Domain with Antitubercular Activity.
J.Med.Chem., 66, 2023
108D
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BU of 108d by Molmil
THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY
分子名称: 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)-BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)-2-METHYLIDENE)-QUINOLINIUM, DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3')
著者Spielmann, H.P, Wemmer, D.E, Jacobsen, J.P.
登録日1995-01-31
公開日1995-06-03
最終更新日2024-03-13
実験手法SOLUTION NMR
主引用文献Solution structure of a DNA complex with the fluorescent bis-intercalator TOTO determined by NMR spectroscopy.
Biochemistry, 34, 1995
6ZY3
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BU of 6zy3 by Molmil
Cryo-EM structure of MlaFEDB in complex with phospholipid
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, ABC transporter maintaining OM lipid asymmetry, cytoplasmic STAS component, ...
著者Dong, C.J, Dong, H.H.
登録日2020-07-30
公開日2020-11-25
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural insights into outer membrane asymmetry maintenance in Gram-negative bacteria by MlaFEDB.
Nat.Struct.Mol.Biol., 28, 2021
7SFM
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BU of 7sfm by Molmil
Mycobacterium tuberculosis Hip1 crystal structure
分子名称: ACETATE ION, GLYCEROL, Hip1
著者Ostrov, D.A, Li, D.
登録日2021-10-04
公開日2022-08-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献2.1 angstrom crystal structure of the Mycobacterium tuberculosis serine hydrolase, Hip1, in its anhydro-form (Anhydrohip1).
Biochem.Biophys.Res.Commun., 630, 2022
5YRX
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BU of 5yrx by Molmil
Crystal structure of a hypothetical protein Rv3716c from Mycobacterium tuberculosis
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Nucleoid-associated protein Rv3716c
著者Deka, G, Gopalan, A, Prabhavathi, M, Savithri, H.S, Raja, A, Murthy, M.R.N.
登録日2017-11-10
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural and biophysical characterization of Rv3716c, a hypothetical protein from Mycobacterium tuberculosis
Biochem. Biophys. Res. Commun., 495, 2018
8HAS
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BU of 8has by Molmil
NARROW LEAF 1-close from Japonica
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Protein NARROW LEAF 1
著者Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M.
登録日2022-10-26
公開日2024-05-01
最終更新日2025-07-16
実験手法ELECTRON MICROSCOPY (2.89 Å)
主引用文献NARROW LEAF 1-close from Japonica
To Be Published
8HAT
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BU of 8hat by Molmil
NARROW LEAF 1-open from Japonica
分子名称: Protein NARROW LEAF 1
著者Zhang, S.J, He, Y.J, Wang, N, Zhang, W.J, Liu, C.M.
登録日2022-10-26
公開日2024-06-12
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献NARROW LEAF 1-open from Japonica
To Be Published
1AJ8
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BU of 1aj8 by Molmil
CITRATE SYNTHASE FROM PYROCOCCUS FURIOSUS
分子名称: CITRATE SYNTHASE, CITRIC ACID, COENZYME A
著者Russell, R.J.M, Ferguson, J.M.C, Hough, D.W, Danson, M.J, Taylor, G.L.
登録日1997-05-16
公開日1997-11-19
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The crystal structure of citrate synthase from the hyperthermophilic archaeon pyrococcus furiosus at 1.9 A resolution,.
Biochemistry, 36, 1997
1ALC
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BU of 1alc by Molmil
REFINED STRUCTURE OF BABOON ALPHA-LACTALBUMIN AT 1.7 ANGSTROMS RESOLUTION. COMPARISON WITH C-TYPE LYSOZYME
分子名称: ALPHA-LACTALBUMIN, CALCIUM ION
著者Acharya, K.R, Stuart, D.I, Phillips, D.C.
登録日1989-08-14
公開日1989-10-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Refined structure of baboon alpha-lactalbumin at 1.7 A resolution. Comparison with C-type lysozyme.
J.Mol.Biol., 208, 1989

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