PDB: 97138 件ウェブページステータス検索Chemie searchBIRD

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2FA3	HMG-CoA synthase from Brassica juncea in complex with acetyl-CoA and acetyl-cys117. 分子名称: ACETYL COENZYME *A, HMG-CoA synthase 著者 Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P. 登録日 2005-12-06 公開日 2006-07-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.52 Å) 主引用文献 Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases. Proc.Natl.Acad.Sci.Usa, 103, 2006
4NCF	Crystal structure of eukaryotic translation initiation factor eIF5B (399-852) from Saccharomyces cerevisiae in complex with GDP 分子名称: Eukaryotic translation initiation factor 5B, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Kuhle, B, Ficner, R. 登録日 2013-10-24 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.015 Å) 主引用文献 eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
4N3N	Crystal structure of eukaryotic translation initiation factor eIF5B (517-1116) from Chaetomium thermophilum, apo form 分子名称: Eukaryotic translation initiation factor 5B-like protein, eIF5B(517-C), LACTIC ACID 著者 Kuhle, B, Ficner, R. 登録日 2013-10-07 公開日 2014-07-09 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.752 Å) 主引用文献 eIF5B employs a novel domain release mechanism to catalyze ribosomal subunit joining. Embo J., 33, 2014
2F82	HMG-CoA synthase from Brassica juncea in the apo-form 分子名称: HMG-CoA synthase 著者 Pojer, F, Ferrer, J.L, Richard, S.B, Noel, J.P. 登録日 2005-12-01 公開日 2006-07-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis for the design of potent and species-specific inhibitors of 3-hydroxy-3-methylglutaryl CoA synthases. Proc.Natl.Acad.Sci.Usa, 103, 2006
4C0S	Mammalian translation elongation factor eEF1A2 分子名称: ELONGATION FACTOR 1-ALPHA 2, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION 著者 Crepin, T, Shalak, V.F, Yaremchuk, A.D, Vlasenko, D.O, McCarthy, A.A, Negrutskii, B.S, Tukalo, M.A, El'skaya, A.V. 登録日 2013-08-07 公開日 2014-08-27 最終更新日 2017-01-25 実験手法 X-RAY DIFFRACTION (2.703 Å) 主引用文献 Mammalian Translation Elongation Factor Eef1A2: X-Ray Structure and New Features of Gdp/GTP Exchange Mechanism in Higher Eukaryotes Nucleic Acids Res., 42, 2014
3WBI	Crystal structure analysis of eukaryotic translation initiation factor 5B structure I 分子名称: Eukaryotic translation initiation factor 5B 著者 Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M. 登録日 2013-05-20 公開日 2014-11-19 最終更新日 2017-11-22 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A Acta Crystallogr.,Sect.D, 70, 2014
3WBJ	Crystal structure analysis of eukaryotic translation initiation factor 5B structure II 分子名称: Eukaryotic translation initiation factor 5B 著者 Zheng, A, Yamamoto, R, Ose, T, Yu, J, Tanaka, I, Yao, M. 登録日 2013-05-20 公開日 2014-11-19 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.495 Å) 主引用文献 X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A Acta Crystallogr.,Sect.D, 70, 2014
6E5P	Backbone model based on cryo-EM map at 8.5 A of domain-swapped, glycan-reactive, neutralizing antibody 2G12 bound to HIV-1 Env BG505 DS-SOSIP, which was also bound to CD4-binding site antibody VRC03 分子名称: 2G12 Light chain, 2G12 heavy chain, Envelope glycoprotein gp120, ... 著者 Acharya, P, Kwong, P.D. 登録日 2018-07-21 公開日 2019-02-13 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (8.8 Å) 主引用文献 Structural Survey of Broadly Neutralizing Antibodies Targeting the HIV-1 Env Trimer Delineates Epitope Categories and Characteristics of Recognition. Structure, 27, 2019
2QKD	Crystal structure of tandem ZPR1 domains 分子名称: FORMIC ACID, ZINC ION, Zinc finger protein ZPR1 著者 Mishra, A.K. 登録日 2007-07-10 公開日 2007-08-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural insights into the interaction of the evolutionarily conserved ZPR1 domain tandem with eukaryotic EF1A, receptors, and SMN complexes. Proc.Natl.Acad.Sci.Usa, 104, 2007
2YOB	High resolution AGXT_M structure 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ... 著者 Fabelo-Rosa, I, Mesa-Torres, N, Riverol, D, Yunta, C, Albert, A, Salido, E, Pey, A.L. 登録日 2012-10-22 公開日 2013-10-30 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 The Role of Protein Denaturation Energetics and Molecular Chaperones in the Aggregation and Mistargeting of Mutants Causing Primary Hyperoxaluria Type I Plos One, 8, 2013
7F27	Crystal structure of polyketide ketosynthase 分子名称: 3-oxoacyl-(Acyl-carrier-protein) synthase 著者 Kim, Y, Lee, W.C. 登録日 2021-06-10 公開日 2022-06-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.806 Å) 主引用文献 Structural basis of the complementary activity of two ketosynthases in aryl polyene biosynthesis. Sci Rep, 11, 2021
7F28	Crystal structure of a bacterial ketosynthase 分子名称: Ketoacyl_synth_N domain-containing protein, Putative 3-oxoacyl-[ACP] synthase FabV 著者 Lee, W.C, Kim, Y. 登録日 2021-06-10 公開日 2022-06-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.877 Å) 主引用文献 Structural basis of the complementary activity of two ketosynthases in aryl polyene biosynthesis. Sci Rep, 11, 2021
6X8M	CryoEM structure of the holo-SrpI encapsulin complex from Synechococcus elongatus PCC 7942 分子名称: Protein SrpI 著者 LaFrance, B.J, Nichols, R.J, Phillips, N.R, Oltrogge, L.M, Valentin-Alvarado, L.E, Bischoff, A.J, Savage, D.F, Nogales, E. 登録日 2020-06-01 公開日 2020-06-10 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.2 Å) 主引用文献 Discovery and characterization of a novel family of prokaryotic nanocompartments involved in sulfur metabolism. Elife, 10, 2021
6X8T	CryoEM structure of the apo-SrpI encapasulin complex from Synechococcus elongatus PCC 7942 分子名称: Protein SrpI 著者 LaFrance, B.J, Nichols, R.J, Phillips, N.R, Oltrogge, L.M, Valentin-Alvarado, L.E, Bischoff, A.J, Savage, D.F, Nogales, E. 登録日 2020-06-01 公開日 2020-06-10 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Discovery and characterization of a novel family of prokaryotic nanocompartments involved in sulfur metabolism. Elife, 10, 2021
2QIL	TOXIC SHOCK SYNDROME TOXIN-1 AT 2.07 A RESOLUTION 分子名称: TOXIC SHOCK SYNDROME TOXIN-1 著者 Acharya, K.R, Papageorgiou, A.C. 登録日 1997-03-27 公開日 1997-08-12 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 The refined crystal structure of toxic shock syndrome toxin-1 at 2.07 A resolution. J.Mol.Biol., 260, 1996
7EP8	Crystal structure of PCNA from Neurospora crassa 分子名称: Proliferating cell nuclear antigen 著者 Sundaram, R, Vasudevan, D. 登録日 2021-04-26 公開日 2021-06-30 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Interdomain connecting loop and J loop structures determine cross-species compatibility of PCNA. J.Biol.Chem., 297, 2021
7BC0	Crystal structure of aldo-keto reductase from Agrobacterium tumefaciens in a binary complex with NADPH 分子名称: Aryl-alcohol dehydrogenase, PHOSPHATE ION 著者 Snow, A, Sharma, M, Davies, G.J. 登録日 2020-12-18 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Oxidative desulfurization pathway for complete catabolism of sulfoquinovose by bacteria. Proc.Natl.Acad.Sci.USA, 119, 2022
7BC1	Crystal structure of aldo-keto reductase from Agrobacterium tumefaciens in a ternary complex with NADPH and glucose 分子名称: Aryl-alcohol dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, alpha-D-glucopyranose 著者 Snow, A, Sharma, M, Davies, G.J. 登録日 2020-12-18 公開日 2022-01-12 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Oxidative desulfurization pathway for complete catabolism of sulfoquinovose by bacteria. Proc.Natl.Acad.Sci.USA, 119, 2022
6GPB	REFINED CRYSTAL STRUCTURE OF THE PHOSPHORYLASE-HEPTULOSE 2-PHOSPHATE-OLIGOSACCHARIDE-AMP COMPLEX 分子名称: 1-deoxy-2-O-phosphono-alpha-D-gluco-hept-2-ulopyranose, ADENOSINE MONOPHOSPHATE, GLYCOGEN PHOSPHORYLASE B, ... 著者 Acharya, K.R, Johnson, L.N. 登録日 1990-06-04 公開日 1992-10-15 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.86 Å) 主引用文献 Refined crystal structure of the phosphorylase-heptulose 2-phosphate-oligosaccharide-AMP complex. J.Mol.Biol., 211, 1990
6N1W	Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody DFPH-a.15 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DFPH-a.15 Light chain, ... 著者 Acharya, P, Kwong, P.D. 登録日 2018-11-12 公開日 2019-07-24 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization. Cell, 178, 2019
6N1V	Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody A12V163-a.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, A12V163-a.01 Heavy chain, ... 著者 Acharya, P, Kwong, P.D. 登録日 2018-11-12 公開日 2019-07-24 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization. Cell, 178, 2019
7E4B	Crystal structure of MIF bound to compound 5 分子名称: 2-[2,4-bis(oxidanyl)phenyl]-3,5,7-tris(oxidanyl)chromen-4-one, CHLORIDE ION, Macrophage migration inhibitory factor 著者 Fan, C.P, Guo, D.Y, Yang, L. 登録日 2021-02-11 公開日 2023-02-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.772 Å) 主引用文献 Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors. J.Agric.Food Chem., 69, 2021
7E45	Crystal structure of compound 7 bound to MIF 分子名称: (2R)-7-[(2R,3R,4R,5S,6S)-6-(hydroxymethyl)-3-[(2R,3R,4R,5R,6S)-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-(4-methoxy-3-oxidanyl-phenyl)-5-oxidanyl-2,3-dihydrochromen-4-one, CHLORIDE ION, Macrophage migration inhibitory factor 著者 Fan, C.P, Yang, L. 登録日 2021-02-10 公開日 2023-02-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.433 Å) 主引用文献 Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors. J.Agric.Food Chem., 69, 2021
7E4A	Crystal structure of MIF bound to compound 13 分子名称: CHLORIDE ION, Flavoxate, Macrophage migration inhibitory factor, ... 著者 Fa, C.P, Guo, D.Y, Yang, L. 登録日 2021-02-11 公開日 2023-02-15 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.475 Å) 主引用文献 Identification and Structure-Activity Relationships of Dietary Flavonoids as Human Macrophage Migration Inhibitory Factor (MIF) Inhibitors. J.Agric.Food Chem., 69, 2021
6W7O	Ternary complex structure - BTK cIAP compound 17 分子名称: Baculoviral IAP repeat-containing protein 2, Tyrosine-protein kinase BTK, ZINC ION, ... 著者 Calabrese, M.F, Schiemer, J.S. 登録日 2020-03-19 公開日 2020-11-18 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.17 Å) 主引用文献 Structural Characterization of BTK:PROTAC:cIAP Ternary Complexes: From Snapshots to Ensembles Nat.Chem.Biol., 2020

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