PDB: 6402 件ウェブページステータス検索Chemie searchBIRD

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7R51	Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp 分子名称: ARG-ASP, Asp/Glu-specific dipeptidyl-peptidase 著者 Tham, C.T, Coker, J.A, Foster, W.R, Ohara-Nemoto, Y, Nemoto, T.K, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-02-09 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.808 Å) 主引用文献 Structure of P. gingivalis DPP11 in complex with the dipeptide Arg-Asp To Be Published
5SDE	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z1619978933 分子名称: 5-fluoro-1-[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]-1,2,3,6-tetrahydropyridine, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.854 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDK	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z416341642 分子名称: (2S)-N,2-dimethyl-N-(propan-2-yl)morpholine-4-sulfonamide, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.977 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDJ	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z32327641 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, [4-(cyclopropanecarbonyl)piperazin-1-yl](furan-2-yl)methanone 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.041 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDI	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z44592329 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, N-phenyl-N'-pyridin-3-ylurea 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.898 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDP	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z2277255954 分子名称: 5-fluoro-1-(1-methylcyclopropane-1-sulfonyl)-1,2,3,6-tetrahydropyridine, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (2.195 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDH	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z2856434854 分子名称: 1-[(3-methoxyphenyl)methyl]piperidine-4-carboxamide, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (2.313 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDO	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z19735067 分子名称: 2-(4-fluorophenoxy)-1-(pyrrolidin-1-yl)ethan-1-one, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (2.051 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDG	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z136583524 分子名称: 2-methyl-N-(pyridin-4-yl)furan-3-carboxamide, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDQ	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z2856434887 分子名称: 2-[(morpholin-4-yl)methyl]phenol, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDC	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z2856434912 分子名称: 3-[(4-methylpiperidin-1-yl)methyl]-1H-indole, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.928 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDF	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z2856434834 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, N-(2,3-dimethylphenyl)-2-(morpholin-4-yl)acetamide 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.877 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDN	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z437584380 分子名称: (4-chlorophenyl)(thiomorpholin-4-yl)methanone, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (2.023 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDL	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z321318226 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, N-(4-methoxyphenyl)-N'-pyridin-4-ylurea 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (2.44 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDR	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z1273312153 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, N-methyl-1H-indole-7-carboxamide 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.077 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDD	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z2856434879 分子名称: 2-[(4-methyl-1H-imidazol-5-yl)methyl]-1,2,3,4-tetrahydroisoquinoline, Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (1.839 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDM	PanDDA analysis group deposition -- Crystal Structure of Porphyromonas gingivalis in complex with Z1328078283 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION, N-(cyclopropylmethyl)-2,2,3,3-tetramethylazetidine-1-carboxamide 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (2.039 Å) 主引用文献 PanDDA analysis group deposition To Be Published
5SDS	PanDDA analysis group deposition of ground-state model of Porphyromonas gingivalis DPP11 分子名称: Asp/Glu-specific dipeptidyl-peptidase, CHLORIDE ION 著者 Tham, C.T, Coker, J.A, Krojer, T, Foster, W.R, Koekemoer, L, Douangamath, A, Talon, R, Fearon, D, von Delft, F, Yue, W.W, Bountra, C, Bezerra, G.A. 登録日 2022-01-20 公開日 2022-02-09 実験手法 X-RAY DIFFRACTION (1.91 Å) 主引用文献 PanDDA analysis group deposition of ground-state model To Be Published
5JWF	Crystal structure of Porphyromonas gingivalis DPP11 分子名称: Asp/Glu-specific dipeptidyl-peptidase, GLYCEROL, S-1,2-PROPANEDIOL 著者 Bezerra, G.A, Fedosyuk, S, Ohara-Nemoto, Y, Nemoto, T.K, Djinovic-Carugo, K. 登録日 2016-05-12 公開日 2017-06-14 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Bacterial protease uses distinct thermodynamic signatures for substrate recognition. Sci Rep, 7, 2017
3I9Y	Crystal structure of the V. parahaemolyticus histidine kinase sensor TorS sensor domain 分子名称: Sensor protein 著者 Moore, J.O, Hendrickson, W.A. 登録日 2009-07-13 公開日 2009-10-06 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Structural analysis of sensor domains from the TMAO-responsive histidine kinase receptor TorS Structure, 17, 2009
3O1H	Crystal Structure of the TorS sensor domain - TorT complex in the presence of TMAO 分子名称: Periplasmic protein TorT, Sensor protein TorS, trimethylamine oxide 著者 Moore, J.O, Hendrickson, W.A. 登録日 2010-07-21 公開日 2011-12-21 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 An asymmetry-to-symmetry switch in signal transmission by the histidine kinase receptor for TMAO. Structure, 20, 2012
3O1J	Crystal Structure of the TorS sensor domain - TorT complex in the absence of isopropanol 分子名称: ISOPROPYL ALCOHOL, Periplasmic protein TorT, Sensor protein TorS 著者 Moore, J.O, Hendrickson, W.A. 登録日 2010-07-21 公開日 2011-12-21 最終更新日 2013-03-27 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 An asymmetry-to-symmetry switch in signal transmission by the histidine kinase receptor for TMAO. Structure, 20, 2012
3O1I	Crystal Structure of the TorS sensor domain - TorT complex in the absence of ligand 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Periplasmic protein TorT, Sensor protein TorS 著者 Moore, J.O, Hendrickson, W.A. 登録日 2010-07-21 公開日 2011-12-21 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 An asymmetry-to-symmetry switch in signal transmission by the histidine kinase receptor for TMAO. Structure, 20, 2012
3BXW	Crystal Structure of Stabilin-1 Interacting Chitinase-Like Protein, SI-CLP 分子名称: Chitinase domain-containing protein 1, SULFATE ION 著者 Meng, G, Green, T.J. 登録日 2008-01-15 公開日 2009-01-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of human stabilin-1 interacting chitinase-like protein (SI-CLP) reveals a saccharide-binding cleft with lower sugar-binding selectivity. J.Biol.Chem., 285, 2010
3ID2	Crystal Structure of RseP PDZ2 domain 分子名称: IODIDE ION, Regulator of sigma E protease 著者 Li, X, Wang, B, Feng, L, Wang, J, Shi, Y. 登録日 2009-07-20 公開日 2009-08-11 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.089 Å) 主引用文献 Cleavage of RseA by RseP requires a carboxyl-terminal hydrophobic amino acid following DegS cleavage Proc.Natl.Acad.Sci.USA, 106, 2009

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