Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2BBW
DownloadVisualize
BU of 2bbw by Molmil
Crystal structure of human adenylate kinase 4 (AK4) in complex with diguanosine pentaphosphate
分子名称: DIGUANOSINE-PENTAPHOSPHATE, adenylate kinase 4, AK4
著者Filippakopoulos, P, Turnbull, A.P, Fedorov, O, Weigelt, J, Bunkoczi, G, Ugochukwu, E, Debreczeni, J, Niesen, F, von Delft, F, Edwards, A, Arrowsmith, C, Sundstrom, M, Knapp, S, Structural Genomics Consortium (SGC)
登録日2005-10-17
公開日2005-12-06
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of human adenylate kinase 4 (AK4) in complex with diguanosine pentaphosphate
To be Published
2F8A
DownloadVisualize
BU of 2f8a by Molmil
Crystal structure of the selenocysteine to glycine mutant of human glutathione peroxidase 1
分子名称: Glutathione peroxidase 1, MALONIC ACID
著者Kavanagh, K.L, Johansson, C, Smee, C, Gileadi, O, von Delft, F, Weigelt, J, Sundstrom, M, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2005-12-02
公開日2005-12-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of the selenocysteine to glycine mutant of human glutathione peroxidase 1
To be Published
2C7R
DownloadVisualize
BU of 2c7r by Molmil
HhaI DNA methyltransferase (T250G mutant) complex with oligonucleotide containing 2-aminopurine as a target base (GPGC:GMGC) and SAH
分子名称: 5'-D(*G*GP*AP*TP*GP*(5CM)*GP*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*(2PR)*GP*CP*AP*TP*CP*C)-3', GLYCEROL, ...
著者Daujotyte, D, Grazulis, S.
登録日2005-11-27
公開日2005-12-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes.
Nucleic Acids Res., 33, 2005
2C7O
DownloadVisualize
BU of 2c7o by Molmil
HhaI DNA methyltransferase complex with 13mer oligonucleotide containing 2-aminopurine adjacent to the target base (PCGC:GMGC) and SAH
分子名称: 5'-D(*T*GP*GP*AP*TP*GP*(5CM)*GP*CP*TP*GP*AP *C)-3', 5'-D(*T*GP*TP*CP*AP*(2PR)*CP*GP*CP*AP*TP*CP *C)-3', MODIFICATION METHYLASE HHAI, ...
著者Daujotyte, D, Grazulis, S.
登録日2005-11-25
公開日2005-12-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes.
Nucleic Acids Res., 33, 2005
2C7Q
DownloadVisualize
BU of 2c7q by Molmil
HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine outside the recognition sequence (paired with G) and SAH
分子名称: 5'-D(*T*GP*GP*(2PR)*GP*GP*(5CM)*GP*CP*TP*GP* AP*C)-3', 5'-D(*T*GP*TP*CP*AP*GP*CP*GP*CP*CP*GP*CP*C)-3', CITRIC ACID, ...
著者Daujotyte, D, Grazulis, S.
登録日2005-11-27
公開日2005-12-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes
Nucleic Acids Res., 33, 2005
2C7P
DownloadVisualize
BU of 2c7p by Molmil
HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine opposite to the target base (GCGC:GMPC) and SAH
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 5'-D(*G*GP*AP*TP*GP*(5CM*2PR)*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*CP*GP*CP*AP*TP*CP*C)-3', ...
著者Neely, R.K, Daujotyte, D, Grazulis, S, Magennis, S.W, Dryden, D.T.F, Klimasauskas, S, Jones, A.C.
登録日2005-11-25
公開日2005-12-14
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes.
Nucleic Acids Res., 33, 2005
2C9Y
DownloadVisualize
BU of 2c9y by Molmil
Structure of human adenylate kinase 2
分子名称: 1,2-ETHANEDIOL, ADENYLATE KINASE ISOENZYME 2, MITOCHONDRIAL, ...
著者Bunkoczi, G, Filippakopoulos, P, Debreczeni, J.E, Turnbull, A, Papagrigoriou, E, Savitsky, P, Colebrook, S, von Delft, F, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Knapp, S.
登録日2005-12-15
公開日2006-01-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of Human Adenylate Kinase 2
To be Published
2FWQ
DownloadVisualize
BU of 2fwq by Molmil
Reduced enolate chromophore intermediate for Y66H GFP variant
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-02
公開日2006-03-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
2FZU
DownloadVisualize
BU of 2fzu by Molmil
Reduced enolate chromophore intermediate for GFP variant
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Tainer, J.A, Getzoff, E.D.
登録日2006-02-10
公開日2006-03-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Structural evidence for an enolate intermediate in GFP fluorophore biosynthesis.
J.Am.Chem.Soc., 128, 2006
2AHA
DownloadVisualize
BU of 2aha by Molmil
Crystal structure analysis of a rate-enhanced variant of redox-sensitive green fluorescent protein in the reduced form, roGFP1-R8.
分子名称: Green fluorescent protein, SULFATE ION
著者Cannon, M.B, Remington, S.J.
登録日2005-07-27
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Re-engineering redox-sensitive green fluorescent protein for improved response rate.
Protein Sci., 15, 2006
2AH8
DownloadVisualize
BU of 2ah8 by Molmil
roGFP1-R7. Cystal structure analysis of a rate-enhanced variant of redox-sensitive green fluorescent protein in the oxidized form.
分子名称: Green fluorescent protein, IMIDAZOLE
著者Cannon, M.B, Remington, S.J.
登録日2005-07-27
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Re-engineering redox-sensitive green fluorescent protein for improved response rate.
Protein Sci., 15, 2006
2G6X
DownloadVisualize
BU of 2g6x by Molmil
Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata
分子名称: green fluorescent protein 2
著者Evdokimov, A.G, Pokross, M.E, Chudakov, D.M.
登録日2006-02-26
公開日2006-03-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Embo Rep., 7, 2006
2G6Y
DownloadVisualize
BU of 2g6y by Molmil
Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata
分子名称: green fluorescent protein 2
著者Evdokimov, A.G, Pokross, M.E, Chudakov, D.M.
登録日2006-02-26
公開日2006-03-28
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the fast maturation of Arthropoda green fluorescent protein.
Embo Rep., 7, 2006
2G3D
DownloadVisualize
BU of 2g3d by Molmil
Structure of S65G Y66A GFP variant after spontaneous peptide hydrolysis
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P.
登録日2006-02-17
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2G16
DownloadVisualize
BU of 2g16 by Molmil
Structure of S65A Y66S GFP variant after backbone fragmentation
分子名称: Green fluorescent protein
著者Barondeau, D.P.
登録日2006-02-13
公開日2006-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2G2S
DownloadVisualize
BU of 2g2s by Molmil
Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P.
登録日2006-02-16
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2G6E
DownloadVisualize
BU of 2g6e by Molmil
Structure of cyclized F64L S65A Y66S GFP variant
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P.
登録日2006-02-24
公開日2006-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2G5Z
DownloadVisualize
BU of 2g5z by Molmil
Structure of S65G Y66S GFP variant after spontaneous peptide hydrolysis and decarboxylation
分子名称: Green fluorescent protein, MAGNESIUM ION
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-02-23
公開日2006-04-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
2AWM
DownloadVisualize
BU of 2awm by Molmil
GFP R96A chromophore maturation recovery mutant R96A Q183R
分子名称: MAGNESIUM ION, green fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWK
DownloadVisualize
BU of 2awk by Molmil
GFP R96M mature chromophore
分子名称: MAGNESIUM ION, green fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWL
DownloadVisualize
BU of 2awl by Molmil
Mature R96K GFP mutant
分子名称: MAGNESIUM ION, green fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2AWJ
DownloadVisualize
BU of 2awj by Molmil
GFP R96M pre-cyclized intermediate in chromophore formation
分子名称: MAGNESIUM ION, green-fluorescent protein
著者Wood, T.I, Barondeau, D.P, Hitomi, C, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2005-09-01
公開日2006-04-18
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
Biochemistry, 44, 2005
2GFP
DownloadVisualize
BU of 2gfp by Molmil
Structure of the Multidrug Transporter EmrD from Escherichia coli
分子名称: Multidrug resistance protein D
著者Yin, Y, He, X, Szewczyk, P, Nguyen, T, Chang, G.
登録日2006-03-22
公開日2006-05-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the multidrug transporter EmrD from Escherichia coli
Science, 312, 2006
2AR3
DownloadVisualize
BU of 2ar3 by Molmil
E90A mutant structure of PlyL
分子名称: PHOSPHATE ION, ZINC ION, prophage lambdaba02, ...
著者Low, L.Y, Yang, C, Perego, M, Osterman, A, Liddington, R.C.
登録日2005-08-19
公開日2006-06-06
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and lytic activity of a Bacillus anthracis prophage endolysin.
J.Biol.Chem., 280, 2005
2EU8
DownloadVisualize
BU of 2eu8 by Molmil
Crystal structure of a thermostable mutant of Bacillus subtilis Adenylate Kinase (Q199R)
分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ...
著者Chen, S, Shamoo, Y.
登録日2005-10-28
公開日2006-06-27
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献In vivo molecular evolution reveals biophysical origins of organismal fitness.
Mol.Cell, 22, 2006

222036

件を2024-07-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon